prot_E-siliculosus-1a_F_contig1240.1507.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1240.1507.1
Unique Nameprot_E-siliculosus-1a_F_contig1240.1507.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length205
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1240.1507.1 vs. uniprot
Match: D8LU01_ECTSI (GT23 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU01_ECTSI)

HSP 1 Score: 412 bits (1059), Expect = 4.130e-145
Identity = 198/204 (97.06%), Postives = 198/204 (97.06%), Query Frame = 0 
Query:    1 MAVFSNEWMEEFGVGALGCAGSAIDAYEWRNAGYGSNINFLTIVWANAMMAGRQDLAVVVRTDEWFPRTICNVTSNGEETRGWPCFFAEVPHLCAFDADQMLVDHLHSYLQPWFKADIQHILDEPDIAEMRNGKYVGMHIRRTDKANEIKLTKTEVYFRKVAQYLRSSPGGLRAADITGLWLSTDEVSVFNEVGGLRAPSPAYI 204
            MAVFSNEWMEEFG GALGC GSAIDAYEWRNAGYGSNINFLTIVWANAMMAGRQDLAVVVRTDEWFPRTICNVTS GEETRGWPCFFAEVPHLCAFDADQMLVDHLHSYLQPWFKADIQ ILDEPDIAEMRNGKYVGMHIRRTDKANE KLTKTEVYFRKVAQYLRSSPGGLRAADITGLWLSTDEVSVFNEVGGLRA SPAYI
Sbjct:   37 MAVFSNEWMEEFGSGALGCVGSAIDAYEWRNAGYGSNINFLTIVWANAMMAGRQDLAVVVRTDEWFPRTICNVTSYGEETRGWPCFFAEVPHLCAFDADQMLVDHLHSYLQPWFKADIQRILDEPDIAEMRNGKYVGMHIRRTDKANETKLTKTEVYFRKVAQYLRSSPGGLRAADITGLWLSTDEVSVFNEVGGLRASSPAYI 240
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BLAST of mRNA_E-siliculosus-1a_F_contig1240.1507.1 vs. uniprot
Match: D8LU00_ECTSI (Similar to putative alpha-6-fucosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU00_ECTSI)

HSP 1 Score: 79.3 bits (194), Expect = 3.730e-15
Identity = 36/69 (52.17%), Postives = 50/69 (72.46%), Query Frame = 0 
Query:  130 MRNGKYVGMHIRRTDKANEIKLTKTEVYFRKVAQYLRSSPGGLRAADITGLWLSTDEVSVFNEVGGLRA 198
            MR+GKYVG+HIRRTDKANE++  KT+ Y  K   YL S    + A +ITG+W+S+D+ +VF+EV  L +
Sbjct:    1 MRSGKYVGLHIRRTDKANEVQPVKTKAYLAKAVNYLASPTNDMAATNITGIWVSSDDEAVFDEVKQLAS 69
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1240.1507.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LU01_ECTSI4.130e-14597.06GT23 domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LU00_ECTSI3.730e-1552.17Similar to putative alpha-6-fucosyltransferase n=1... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.11350coord: 100..202
e-value: 3.1E-9
score: 38.3
NoneNo IPR availablePANTHERPTHR13132ALPHA- 1,6 -FUCOSYLTRANSFERASEcoord: 111..194
IPR027350Glycosyltransferase family 23 (GT23) domainPROSITEPS51659GT23coord: 110..204
score: 15.02

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1240contigE-siliculosus-1a_F_contig1240:13717..16342 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1240.1507.1mRNA_E-siliculosus-1a_F_contig1240.1507.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1240 13696..16342 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1240.1507.1 ID=prot_E-siliculosus-1a_F_contig1240.1507.1|Name=mRNA_E-siliculosus-1a_F_contig1240.1507.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=205bp
MAVFSNEWMEEFGVGALGCAGSAIDAYEWRNAGYGSNINFLTIVWANAMM
AGRQDLAVVVRTDEWFPRTICNVTSNGEETRGWPCFFAEVPHLCAFDADQ
MLVDHLHSYLQPWFKADIQHILDEPDIAEMRNGKYVGMHIRRTDKANEIK
LTKTEVYFRKVAQYLRSSPGGLRAADITGLWLSTDEVSVFNEVGGLRAPS
PAYI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027350GT23_dom