mRNA_E-siliculosus-1a_F_contig1240.1506.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1240.1506.1
Unique NamemRNA_E-siliculosus-1a_F_contig1240.1506.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1240.1506.1 vs. uniprot
Match: A0A6H5L061_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L061_9PHAE)

HSP 1 Score: 418 bits (1074), Expect = 4.090e-146
Identity = 200/214 (93.46%), Postives = 205/214 (95.79%), Query Frame = 1
Query:  217 FRHPISRLVSAYFYCKQNGWDELCASMVLKAGKTDLHTFAKHWGNYGLRQFSLAFVGAEDVFATEQERGIDGRPVMFPGWYRVKEYFENQLDVEQERALIQETGGSNDLALSYLLQPVEDLLSRNYSAVGILEKWETSMNLFNKALKVPNFNWQTASRNLGRKNVDKRLHDEEAQALRAAWDDPVLAKTLWLDILLYDHAVAVHNKQVEEHGIV 858
            ++ PI RLVSAYFYCKQNGWDELCASMVLKAG TDLHTFAKHWGNYGLRQFSLAFVGAEDVFA EQERGIDGRPVMFPGWYRVKEYFENQ DVEQERAL+QETG SNDLA+SYLLQPVEDLLSRNYSAVGILEKWETSM LFNKALKVP+FNWQTASRNLGRKNVDKRLHDEEA ALRAAWDDPVLAKTLWLDI LYDHAVAVHNKQVEEHGIV
Sbjct:   18 YKCPIPRLVSAYFYCKQNGWDELCASMVLKAGNTDLHTFAKHWGNYGLRQFSLAFVGAEDVFAAEQERGIDGRPVMFPGWYRVKEYFENQFDVEQERALMQETGASNDLAMSYLLQPVEDLLSRNYSAVGILEKWETSMTLFNKALKVPSFNWQTASRNLGRKNVDKRLHDEEAHALRAAWDDPVLAKTLWLDIFLYDHAVAVHNKQVEEHGIV 231          
BLAST of mRNA_E-siliculosus-1a_F_contig1240.1506.1 vs. uniprot
Match: D7FS84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS84_ECTSI)

HSP 1 Score: 263 bits (673), Expect = 4.100e-84
Identity = 137/301 (45.51%), Postives = 198/301 (65.78%), Query Frame = 1
Query:    1 MVKAGGTTVKSLIQSSMKRMHSSMGLYTNHHWMRDRSTVKNGVTTAKSGITYGAYTEALRPHEG---RDCKWFTIFRHPISRLVSAYFYCKQNGWDELCASMVLKAGK--TDLHTFAKHWGNYGLRQFSLAFVGAEDVFATEQERGIDGRPVMF------PGWYRVKEYFENQLDVEQERALIQETGGSNDLA-----LSYLLQPVEDLLSRNYSAVGILEKWETSMNLFNKALKVPNFNWQTASRNLGRKNVDKRLHDEEAQALRAAWDDPVLAKTLWLDILLYDHAVAVHNKQVEEHGI 855
            M KAGG+TVK ++    K  + ++GLY +  W+  +   ++ +    S + +GAYTE LRP  G   R+CKWFTIFRHPI RLVSAYFYCK+   D LCA++ L A    TDL+ FA+HWG++GLRQF+LAFV  E++ A + +    G    +      PGWY +K Y + QLD +++    +   GS   A     +S+LLQPV++LL+  Y+AVG+LE+WETS+ LFN+AL +P F+W     ++G+KN D   H+EEA+ L  +W DP L + L LD+LLYD+AV+VHN+QV+++G+
Sbjct:    1 MNKAGGSTVKYMLAPWTKAQNVTVGLYDSPQWLEGKDFAQDFLGDENS-LMWGAYTEGLRPFGGLGLRECKWFTIFRHPIPRLVSAYFYCKKKPQDGLCATVALDANADDTDLYAFAEHWGDFGLRQFALAFVLPEELLANKVKYDATGICTPYHGKRSCPGWYELKLYLQQQLDEQEQGEGSRGWDGSGAAASGAATISHLLQPVQELLTNEYAAVGVLEQWETSLLLFNEALGMPGFDWPETFGSIGKKNSDGTFHNEEAEMLLRSWTDPRLRRYLSLDLLLYDYAVSVHNQQVDKYGL 300          
BLAST of mRNA_E-siliculosus-1a_F_contig1240.1506.1 vs. uniprot
Match: A0A6H5JY77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY77_9PHAE)

HSP 1 Score: 240 bits (613), Expect = 1.510e-74
Identity = 132/294 (44.90%), Postives = 173/294 (58.84%), Query Frame = 1
Query:    1 MVKAGGTTVKSLIQSSMKRMHSSMGLYTNHHWMRDRSTVKNGVTTAKSGITYGAYTEALRPHEGRDCKWFTIFRHPISRLVSAYFYCKQNGWDELCASMVLKAGKTDLHTFAKHWGNYGLRQFSLAFVGAEDVFATE-------QERGIDGRPVMFPGWYRVKEYFENQLDVEQERALIQETGGSNDLALSYLLQPVEDLLSRNYSAVGILEKWETSMNLFNKALKVPNFNWQTASRNLGRKNVD-KRLHDEEAQALRAAWDDPVLAKTLWLDILLYDHAVAVHNKQVEEHGIV 858
            M K+GG TV+ +I   +     S  L+ +  W   RS  +  V    +  TYG YTE LR ++ RDCKWFT+FRHP+SR+VSAYFYC++   D+LCA++VL A K DL TFA+HWGNYGLRQF+LA + AEDVF  E       Q RG     V  P WYR K Y    L +  +      T   + LA    L   ++ LS  Y+AVGI+E+W+ SM LFN+ L +  F+W    +  G+KN    +       AL+AAW  P L K +WLDILLYDHA++VH  QV + GIV
Sbjct:   58 MNKSGGMTVRKMIMPFLTEKGVSTALFDDIEWSSGRSYAETFVKE-NAVFTYGGYTEGLRMYDDRDCKWFTVFRHPVSRVVSAYFYCQRAHHDQLCAAVVLDASKVDLLTFAEHWGNYGLRQFALASIKAEDVFHNEVVSEFCQQARGHGD--VCIPAWYRQKHY----LHLPHQDDFCGPTQPESGLA--QFLSSAQETLSTRYAAVGIIEEWDNSMELFNRVLNLRRFDWVKEFQKSGKKNSGGSQFETASKSALKAAWHSPELKKFIWLDILLYDHALSVHRSQVADLGIV 342          
BLAST of mRNA_E-siliculosus-1a_F_contig1240.1506.1 vs. uniprot
Match: A0A6H5JQY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQY7_9PHAE)

HSP 1 Score: 212 bits (540), Expect = 7.530e-64
Identity = 119/291 (40.89%), Postives = 175/291 (60.14%), Query Frame = 1
Query:    1 MVKAGGTTVKSLIQSSMKRMHSSMGLYTNHHWMRDRSTVKNGVTTAKSGITYGAYTEALRPHEG-RDCKWFTIFRHPISRLVSAYFYCKQNGWDELCASMVLKAGKTDLHTFAKHWGNYGLRQFSLAFVGAEDVFATEQERGIDGRPVMFPGWYRVKEYFENQLDVEQER---ALIQETGGSNDLALSYLLQPVEDLLSRNYSAVGILEKWETSMNLFNKALKVPNFNWQTASRNLGRKNVDKRLHDEEAQ--ALRAAWDDPVLAKTLWLDILLYDHAVAVHNKQVEEHGI 855
            M KAGGT+++ +I+      ++++G +T+  +      V+  +   +  + +GAYTE LRP+     CKWFT+ RHPI+RLVSA+ YC     D+LCA+ + K    D++ FA+HWGN+G+ QF+LAF    D+  TE         V  P WY+ K YFE +L    +    A I       ++ +  +LQPVE+LL   Y+AVGILE+WETSM LF+ AL++P FNW + S +   +NV    HD +A+   L A+  DPVL + LWLDILLY+HA +VH  Q+  +G+
Sbjct:   43 MNKAGGTSIRRMIKDYAAATNTTVGEFTHTQYNAGDRGVQQ-ILDRRPSLIWGAYTEGLRPYATVLGCKWFTMVRHPIARLVSAFNYCGIVPSDQLCATRIHKPEDGDIYDFAEHWGNHGVVQFALAFEDLNDILVTE---------VKSPPWYKAKLYFEGRLGPSGKTSTSANISTKDVCQNVWMPEILQPVEELLRSKYAAVGILEQWETSMMLFDHALQLPGFNWTSTSASSTPRNV----HDSKAKNDLLVASMTDPVLKQILWLDILLYEHACSVHKAQLSRYGL 319          
BLAST of mRNA_E-siliculosus-1a_F_contig1240.1506.1 vs. uniprot
Match: A0A6H5JNJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNJ0_9PHAE)

HSP 1 Score: 204 bits (520), Expect = 8.010e-61
Identity = 107/286 (37.41%), Postives = 170/286 (59.44%), Query Frame = 1
Query:    7 KAGGTTVKSLIQSSMKRMHSSMGLYTNHHWMRDRSTVKNGVTTAKSGITYGAYTEALRPHEGRDCKWFTIFRHPISRLVSAYFYCKQNGWDELCASMVLKAGKTDLHTFAKHWGNYGLRQFSLAFVGAEDVFATEQERGIDGRPVMFPGWYRVKEYFENQLDVEQERALIQETGGSND---LALSYLLQPVEDLLSRNYSAVGILEKWETSMNLFNKALKVPNFNWQTASRNLGRKNVDKRLHDEEAQALRAAWDDPVLAKTLWLDILLYDHAVAVHNKQVEEHGI 855
            KAGGTTVK+ +++  +  + ++ L  +  + R    +++ +   K  +  G Y E LR    + CKWFT+ RHPI+RL+SA++YC     D+LCA+ + K    D++ FAKHWGNY L QF+L  V   ++FA E    +D      P W++ K YFE +L      +        ++   + +  +LQPVE+LL  NY+AVGILE W+ SM LF+ AL++P FNW  AS +L  +    ++ +++A  L AA  DPVL + +WLD+LLY++A ++H +Q+  + +
Sbjct:   45 KAGGTTVKTHLRNYAESRNETVALCHSDWYARGDKGIQD-LLNDKPVLIAGGYAEGLRTSAFQGCKWFTMMRHPIARLISAFYYCSGGNRDQLCAANIHKPEDGDIYDFAKHWGNYALLQFALGVVDQHEIFAEE----VDA-----PAWFKAKLYFEGRLGYPGNMSTATNRTTHDEWQSVWIPDILQPVEELLRSNYAAVGILEHWQRSMMLFDHALEIPGFNWTVASASLSPRKSQNKIVEKKAM-LAAAMTDPVLRQYVWLDLLLYEYACSLHEEQLRRYDL 319          
BLAST of mRNA_E-siliculosus-1a_F_contig1240.1506.1 vs. uniprot
Match: D7G715_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G715_ECTSI)

HSP 1 Score: 196 bits (499), Expect = 8.390e-57
Identity = 112/301 (37.21%), Postives = 161/301 (53.49%), Query Frame = 1
Query:    7 KAGGTTVKSLIQSSMKRMHSSMGLYTNHHWMRDRSTVKNGVTTAKSGITY----GAYTEALR------PHEGRD-CKWFTIFRHPISRLVSAYFYCKQNGWDELCASMVLKAGKTDLHTFAKHWGNYGLRQFSLAFVG---AEDVFATEQERGIDGRPV----MFPGWYRVKEYFENQLDVEQERALIQETGGSNDLALSYLLQPVEDLLSRNYSAVGILEKWETSMNLFNKALKVPNFNWQTASRNLGRKNVDKRLHDEEAQALRAAWDDPVLAKTLWLDILLYDHAVAVHNKQVEEHGI 855
            KAGGTTVK L+  S     S    Y ++ W + +   ++   +  S   +    G Y EALR      P + R  C+WFT+FRHP+SRLVSAY+YC+++  D+LCAS  + +   DL TFA+HWGN+ LRQF+L FV     +D   +    G  G       + PGWY +K +  ++  V  + +            L Y+ +PV DLL  NY+ VGILE W  +++LF+ AL +P   W+      G+ NVD R   E+   L+ A  DP + K L LD+ LY  AV + N+Q   +GI
Sbjct:   96 KAGGTTVKRLLFDSWG---SESTTYDSYQWKKGQGYAESVAASLASPAGWSAAAGGYLEALRRTPAFQPDDERTPCRWFTVFRHPVSRLVSAYYYCREDPSDQLCASEFVSSRNVDLVTFARHWGNFALRQFALGFVSHDKVKDFLVSPNGGGAMGLTAEQVELMPGWYMLKLFLNDRSGVADDTS-------PEGTRLEYMFRPVVDLLRDNYAVVGILEDWNATLSLFDSALDMPGMTWREEFERSGKLNVDTRFKGEKQDVLQQALSDPEIVKHLSLDLRLYGQAVDIFNQQRHSYGI 386          
BLAST of mRNA_E-siliculosus-1a_F_contig1240.1506.1 vs. uniprot
Match: D7G716_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G716_ECTSI)

HSP 1 Score: 196 bits (497), Expect = 7.380e-56
Identity = 119/297 (40.07%), Postives = 161/297 (54.21%), Query Frame = 1
Query:    7 KAGGTTVKSLIQSSMKRMHSSMGLYTNHHW-MRDRSTVKNGVTTA---KSGITYGAYTEALRPHE--GRDCKWFTIFRHPISRLVSAYFYCKQNGWDELCASMVLKAGKTDLHTFAKHWGNYGLRQFSLAFVGAEDVFATEQERGIDGRPVMFPGWYRVKEYFENQ-------LDVEQERALIQETGGSNDLALSYLLQPVEDLLSRNYSAVGILEKWETSMNLFNKALKVPNFNWQTASRNLGRKNVDKRLHDEEAQALRAAWDDPVLAKTLWLDILLYDHAVAVHNKQVEEHGIV 858
            K GG+TVK L++    R  S   +Y +  W   D  + K G   A   K  +  G YTEALR  E  G  C++FT+FRHPI+R+VSAYFYC+    D  CAS V++A   DL TFAKHWGN+ LRQF+L FV ++DV    QE             Y++K Y E         L   +     Q+   + D  L  LLQP  DL+   Y AVGILE+W T++ LF+  L +P  NW+      G+ +VD      E + L+ AW D  L K + LD+LLY+HAV V ++Q   HG++
Sbjct:  185 KCGGSTVKDLLED---RWGSRFFIYDSMRWKFGDEFSAKFGAKLALGDKWNVMTGGYTEALRLSEPVGAGCRFFTLFRHPIARMVSAYFYCRSVSGDVACASEVMQAKDVDLLTFAKHWGNFALRQFALGFVPSDDV----QE-------------YQLKMYLERPQKEDGGVLGQREAMTAHQDAAATPDAPLYELLQPAMDLVRDGYVAVGILEQWNTTLRLFDHTLDMPVMNWEEQFAESGKHHVDIVNKQLEIETLQQAWTDSELKKYMRLDLLLYEHAVDVFHQQARSHGLL 461          
BLAST of mRNA_E-siliculosus-1a_F_contig1240.1506.1 vs. uniprot
Match: D7FWQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWQ3_ECTSI)

HSP 1 Score: 195 bits (496), Expect = 1.040e-55
Identity = 115/301 (38.21%), Postives = 171/301 (56.81%), Query Frame = 1
Query:    7 KAGGTTVKSLIQSSMKRMHSSMGLYTNHHW-MRDRSTVKNGVTTAKS---GITYGAYTEALRPHEGRD--CKWFTIFRHPISRLVSAYFYCKQNGWDELCASMVLKAGKTDLHTFAKHWGNYGLRQFSLAFV---GAEDVFATEQERGI-DGRPVMFPGWYRVKEYFENQ------LDVEQERALIQETGGSNDLALSY-LLQPVEDLLSRNYSAVGILEKWETSMNLFNKALKVPNFNWQTASRNLGRKNVDKRLHDEEAQALRAAWDDPVLAKTLWLDILLYDHAVAVHNKQVEEHGIV 858
            K GG+TVK +++ S    +S   +Y ++ W + D  +   GV  A+     +  G YTEALR  E  D  C++FT+FRHPI+R+VSAYFYC+    D  CAS V+ A   DL TFAKHWGN+ +RQF+L FV   G ++   T + + + D       GWY++K Y E        +  + E   ++    +   A  Y LLQP  DL+   Y AVGILE+W T+++LF+ AL++P   W       G++ VD +    E++ L+ AW D  L K + LD+LLY+HAV V ++Q   +G++
Sbjct:  164 KCGGSTVKYMLRRSYGSRYS---IYDSNQWKLGDDISANFGVKLARGETWNVMAGGYTEALRRSEPVDAGCRFFTLFRHPIARMVSAYFYCRSTLGDAACASEVVDAKDVDLLTFAKHWGNFAVRQFALGFVPSDGVQEYIRTPEAQALHDFDLKKIAGWYQLKMYLERPEKGDWGVPGQSEAMTVEHDAAATLEAPLYDLLQPAMDLIRSGYVAVGILEQWNTTLHLFDHALEIPGMYWGAQFAEGGKQRVDYKNKRLESETLKQAWTDSELKKYMRLDLLLYEHAVDVFHEQARGYGLL 461          
BLAST of mRNA_E-siliculosus-1a_F_contig1240.1506.1 vs. uniprot
Match: D8LU75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU75_ECTSI)

HSP 1 Score: 146 bits (369), Expect = 5.860e-39
Identity = 91/246 (36.99%), Postives = 129/246 (52.44%), Query Frame = 1
Query:  127 VTTAKSGITYGAYTEALRPHEGRDCKWFTIFRHPISRLVSAYFYCKQNGWDELCASMVLKAGKTDLHTFAKHWGNYGLRQFSLAFVGAEDVFATEQERGIDGRPVMFPGWYRVKEYFENQLDVEQERALIQETGGSNDLALSYLLQPVEDLLSRNYSAVGILEKWETSMNLFNKALKVPNFNWQTASRNLGRKNVDKRLHD---EEAQALRAAWDDPVLAKTLWLDILLYDHAVAVHNKQVEEHGI 855
            V  ++  + +G   E+LR H+GR CKW TIFRHPI+RL+SAY +C     D +C         T L  FA+ WGN+ +RQF+LA V    V     +R       M   WY VKEY                 G + D  L   L+PV+ LLS  Y+AVGI ++ +T+M LF+KAL +   +W ++   LG    DK+  +    E++  R A ++P +   L LD+ LY+HAV V   QV + GI
Sbjct:   39 VMASRWKLLHGGCVESLRNHKGRSCKWITIFRHPIARLLSAYDHCLGAPKDPVCPP----TESTGLAAFAELWGNFAMRQFALAAVSPSAVKEWAAQRQARTGTSM---WYLVKEYLARG-------------GIAEDEVLGSKLEPVKGLLSTQYAAVGIAQELKTTMVLFSKALSMEGLDWSSSWATLGINEEDKQDSEYDITESEPFRQALENPRIVSALRLDMSLYEHAVHVFKDQVAQFGI 264          
BLAST of mRNA_E-siliculosus-1a_F_contig1240.1506.1 vs. uniprot
Match: A0A6H5JQM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM0_9PHAE)

HSP 1 Score: 142 bits (358), Expect = 3.950e-35
Identity = 87/239 (36.40%), Postives = 123/239 (51.46%), Query Frame = 1
Query:  148 ITYGAYTEALRPHEGRDCKWFTIFRHPISRLVSAYFYCKQNGWDELCASMVLKAGKTDLHTFAKHWGNYGLRQFSLAFVGAEDVFATEQERGIDGRPVMFPGWYRVKEYFENQLDVEQERALIQETGGSNDLALSYLLQPVEDLLSRNYSAVGILEKWETSMNLFNKALKVPNFNWQTASRNLG---RKNVDKRLHDEEAQALRAAWDDPVLAKTLWLDILLYDHAVAVHNKQVEEHGI 855
            + +G   E+LR H+ R CKW TIFRHPI+RL+SAY +C +   D +C         T L  FA+ WGN+ +RQF+L  V    V     +R       M   WY VKEY                 G + D  L  +L+PV+ LLS  Y+AVGI ++ ET+M LF+KAL +   +W ++   LG       D      E++  R A ++P +   L LD+ LY+HA+ V   QV + GI
Sbjct:  324 LLHGGCVESLRNHKERSCKWLTIFRHPIARLLSAYHHCLEAPKDPVCPP----TESTGLVVFAELWGNFAMRQFALESVSPSAVKEWAAQRQARTGTSM---WYLVKEYLARG-------------GIAEDEVLESMLEPVKGLLSTQYAAVGIAQELETTMVLFSKALSMEGLDWSSSWATLGINEEVKQDSEYDIAESEPFRQALENPRIVSALRLDMSLYEHAMHVFKDQVAQFGI 542          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1240.1506.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
A0A6H5L061_9PHAE4.090e-14693.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FS84_ECTSI4.100e-8445.51Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JY77_9PHAE1.510e-7444.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQY7_9PHAE7.530e-6440.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JNJ0_9PHAE8.010e-6137.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G715_ECTSI8.390e-5737.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G716_ECTSI7.380e-5640.07Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FWQ3_ECTSI1.040e-5538.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LU75_ECTSI5.860e-3936.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JQM0_9PHAE3.950e-3536.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1240contigE-siliculosus-1a_F_contig1240:7185..8894 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size861
Model size861
Exons2
Ec32 orthologEc-12_003640.1
Ec32 ortholog descriptionSulfotransferase
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.S
EggNOG OGs2CYGC@1,2S47N@2759
EggNOG free text desc.Sulfotransferase family
Seed eggNOG ortholog2880.D7G715
Seed ortholog evalue2.7e-48
Seed ortholog score199.1
Taxonomic scopeEukaryota
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927762.8052893-CDS-E-siliculosus-1a_F_contig1240:7184..78211622927762.8052893-CDS-E-siliculosus-1a_F_contig1240:7184..7821Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1240 7185..7821 -
1696318670.210269-CDS-E-siliculosus-1a_F_contig1240:7184..78211696318670.210269-CDS-E-siliculosus-1a_F_contig1240:7184..7821Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1240 7185..7821 -
1622927762.816211-CDS-E-siliculosus-1a_F_contig1240:8670..88941622927762.816211-CDS-E-siliculosus-1a_F_contig1240:8670..8894Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1240 8671..8894 -
1696318670.222993-CDS-E-siliculosus-1a_F_contig1240:8670..88941696318670.222993-CDS-E-siliculosus-1a_F_contig1240:8670..8894Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1240 8671..8894 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1240.1506.1prot_E-siliculosus-1a_F_contig1240.1506.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1240 7185..8894 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1240.1506.1

>prot_E-siliculosus-1a_F_contig1240.1506.1 ID=prot_E-siliculosus-1a_F_contig1240.1506.1|Name=mRNA_E-siliculosus-1a_F_contig1240.1506.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=287bp
MVKAGGTTVKSLIQSSMKRMHSSMGLYTNHHWMRDRSTVKNGVTTAKSGI
TYGAYTEALRPHEGRDCKWFTIFRHPISRLVSAYFYCKQNGWDELCASMV
LKAGKTDLHTFAKHWGNYGLRQFSLAFVGAEDVFATEQERGIDGRPVMFP
GWYRVKEYFENQLDVEQERALIQETGGSNDLALSYLLQPVEDLLSRNYSA
VGILEKWETSMNLFNKALKVPNFNWQTASRNLGRKNVDKRLHDEEAQALR
AAWDDPVLAKTLWLDILLYDHAVAVHNKQVEEHGIV*
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mRNA from alignment at E-siliculosus-1a_F_contig1240:7185..8894-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1240.1506.1 ID=mRNA_E-siliculosus-1a_F_contig1240.1506.1|Name=mRNA_E-siliculosus-1a_F_contig1240.1506.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1710bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1240:7185..8894- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGTTAAGGCCGGGGGAACGACCGTAAAAAGCTTAATTCAGTCGTCAAT GAAGCGAATGCACTCTTCAATGGGGCTATACACGAACCACCACTGGATGA GGGATAGAAGCACCGTGAAAAACGGCGTAACGACGGCCAAGAGCGGCATC ACATATGGTGCTTACACGGAAGCACTTCGCCCTCACGAGGGACGCGACTG CAAATGGTTCACCATTTTCCGGCAGTGAGTAAAACTTGACGTTATCTTCA TCGGGCTGTTGGCCACCACCTGAAAGTCATATCACCTGTTTTGCTCGCCA ACCTTCCCCCCTCTAGGCCCGTTTCGCAGACAGGCGATGTAGTCGAGCCC ATAGAACGAAAACTACATGCCGTGGACTATGCATGTGAGCCCTCTGGAGA GGGCTCGTAAGAGCACATCGCCATCAAGGGATGGTGCAAGATGAAACTAA CGCAGGCAGCAGGACCAACCCACAATTGGCTGCCAAAGGCCATGTGACGT TTCTCAAGCTTAACAGCTCGCACAGCTGACGTTTTGTTTGCTCCGCCTGC CCAGGGAAGGGCAAACCCTAACCCAACCAACCCAATGTCGTCACCAAATA CAATTCTCAATCTGACTGGGGCGACATATTTCAATTGGAAGTTTTGTCAT ATACATTCCGTGTCAGTCAAAACTTCTTTTTTCATGCGGCCCGAAGGTAG GCGACTTCCATGGTAGTTGGTTGAACTGGCTCCCATGGAAGCTCGTCGAC TTCAACTAGCTTCTATGGAAGTTAAAGATTTCGTGGAAGTCGTTCGCGAA ACGCCCCTAATTTGACTTGCAAGGAAGCTCCCTTTACTTCCATGGAAGTC ACTTGGCGAGTTTCCCTGGAATTCAAACTTAACCAACTTCCATAGAAGTG GTATTTCTCGACTTCCATGGAAGAATAATTGTAATTCCTTACGTGGAAGT ACACGCAATTTTTCATCTATTGTAGTGAATCTCCAGCGAACCTCAACGAA TCAATAAGAACACGAAACCCGTACATGCTGTCACCTGTTCTGTGCCTCAA ACGCCTCGTCGTCCTTTTTGCAGCCCGATATCACGGCTTGTGAGCGCGTA CTTTTACTGCAAGCAAAACGGTTGGGACGAGCTCTGCGCATCCATGGTCT TGAAGGCGGGCAAAACAGACCTGCATACGTTCGCCAAACACTGGGGCAAC TATGGCTTGCGTCAATTCTCCCTCGCGTTTGTCGGAGCAGAGGACGTATT TGCTACAGAGCAGGAACGTGGAATAGATGGACGACCAGTGATGTTTCCCG GATGGTATAGAGTCAAGGAGTACTTCGAAAACCAACTTGACGTGGAACAA GAACGGGCCCTCATTCAGGAAACCGGAGGATCAAATGACCTTGCACTGTC TTACTTACTCCAGCCTGTGGAGGACCTGCTGAGCAGAAACTACTCCGCTG TGGGAATACTGGAGAAGTGGGAAACGAGTATGAATCTGTTCAACAAAGCT CTCAAGGTGCCGAATTTCAACTGGCAAACGGCTTCTCGTAATCTCGGGCG AAAAAATGTTGACAAGAGACTCCATGACGAGGAGGCCCAGGCGCTACGCG CTGCGTGGGATGACCCGGTCCTCGCGAAAACGTTGTGGCTTGACATTCTC CTGTATGACCACGCTGTCGCCGTCCACAACAAGCAGGTCGAAGAACATGG CATTGTGTAA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1240:7185..8894-

>mRNA_E-siliculosus-1a_F_contig1240.1506.1 ID=mRNA_E-siliculosus-1a_F_contig1240.1506.1|Name=mRNA_E-siliculosus-1a_F_contig1240.1506.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1722bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1240:7185..8894- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGTTAAGGCCGGGGGAACGACCGTAAAAAGCTTAATTCAGTCGTCAAT
GAAGCGAATGCACTCTTCAATGGGGCTATACACGAACCACCACTGGATGA
GGGATAGAAGCACCGTGAAAAACGGCGTAACGACGGCCAAGAGCGGCATC
ACATATGGTGCTTACACGGAAGCACTTCGCCCTCACGAGGGACGCGACTG
CAAATGGTTCACCATTTTCCGGCAATGGTTAAGGCCGGGGGAACGACCGT
AAAAAGCTTAATTCAGTCGTCAATGAAGCGAATGCACTCTTCAATGGGGC
TATACACGAACCACCACTGGATGAGGGATAGAAGCACCGTGAAAAACGGC
GTAACGACGGCCAAGAGCGGCATCACATATGGTGCTTACACGGAAGCACT
TCGCCCTCACGAGGGACGCGACTGCAAATGGTTCACCATTTTCCGGCACC
CGATATCACGGCTTGTGAGCGCGTACTTTTACTGCAAGCAAAACGGTTGG
GACGAGCTCTGCGCATCCATGGTCTTGAAGGCGGGCAAAACAGACCTGCA
TACGTTCGCCAAACACTGGGGCAACTATGGCTTGCGTCAATTCTCCCTCG
CGTTTGTCGGAGCAGAGGACGTATTTGCTACAGAGCAGGAACGTGGAATA
GATGGACGACCAGTGATGTTTCCCGGATGGTATAGAGTCAAGGAGTACTT
CGAAAACCAACTTGACGTGGAACAAGAACGGGCCCTCATTCAGGAAACCG
GAGGATCAAATGACCTTGCACTGTCTTACTTACTCCAGCCTGTGGAGGAC
CTGCTGAGCAGAAACTACTCCGCTGTGGGAATACTGGAGAAGTGGGAAAC
GAGTATGAATCTGTTCAACAAAGCTCTCAAGGTGCCGAATTTCAACTGGC
AAACGGCTTCTCGTAATCTCGGGCGAAAAAATGTTGACAAGAGACTCCAT
GACGAGGAGGCCCAGGCGCTACGCGCTGCGTGGGATGACCCGGTCCTCGC
GAAAACGTTGTGGCTTGACATTCTCCTGTATGACCACGCTGTCGCCGTCC
ACAACAAGCAGGTCGAAGAACATGGCATTGTGTAACCCGATATCACGGCT
TGTGAGCGCGTACTTTTACTGCAAGCAAAACGGTTGGGACGAGCTCTGCG
CATCCATGGTCTTGAAGGCGGGCAAAACAGACCTGCATACGTTCGCCAAA
CACTGGGGCAACTATGGCTTGCGTCAATTCTCCCTCGCGTTTGTCGGAGC
AGAGGACGTATTTGCTACAGAGCAGGAACGTGGAATAGATGGACGACCAG
TGATGTTTCCCGGATGGTATAGAGTCAAGGAGTACTTCGAAAACCAACTT
GACGTGGAACAAGAACGGGCCCTCATTCAGGAAACCGGAGGATCAAATGA
CCTTGCACTGTCTTACTTACTCCAGCCTGTGGAGGACCTGCTGAGCAGAA
ACTACTCCGCTGTGGGAATACTGGAGAAGTGGGAAACGAGTATGAATCTG
TTCAACAAAGCTCTCAAGGTGCCGAATTTCAACTGGCAAACGGCTTCTCG
TAATCTCGGGCGAAAAAATGTTGACAAGAGACTCCATGACGAGGAGGCCC
AGGCGCTACGCGCTGCGTGGGATGACCCGGTCCTCGCGAAAACGTTGTGG
CTTGACATTCTCCTGTATGACCACGCTGTCGCCGTCCACAACAAGCAGGT
CGAAGAACATGGCATTGTGTAA
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