mRNA_E-siliculosus-1a_F_contig1240.1506.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1240.1506.1 vs. uniprot
Match: A0A6H5L061_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L061_9PHAE) HSP 1 Score: 418 bits (1074), Expect = 4.090e-146 Identity = 200/214 (93.46%), Postives = 205/214 (95.79%), Query Frame = 1
Query: 217 FRHPISRLVSAYFYCKQNGWDELCASMVLKAGKTDLHTFAKHWGNYGLRQFSLAFVGAEDVFATEQERGIDGRPVMFPGWYRVKEYFENQLDVEQERALIQETGGSNDLALSYLLQPVEDLLSRNYSAVGILEKWETSMNLFNKALKVPNFNWQTASRNLGRKNVDKRLHDEEAQALRAAWDDPVLAKTLWLDILLYDHAVAVHNKQVEEHGIV 858
++ PI RLVSAYFYCKQNGWDELCASMVLKAG TDLHTFAKHWGNYGLRQFSLAFVGAEDVFA EQERGIDGRPVMFPGWYRVKEYFENQ DVEQERAL+QETG SNDLA+SYLLQPVEDLLSRNYSAVGILEKWETSM LFNKALKVP+FNWQTASRNLGRKNVDKRLHDEEA ALRAAWDDPVLAKTLWLDI LYDHAVAVHNKQVEEHGIV
Sbjct: 18 YKCPIPRLVSAYFYCKQNGWDELCASMVLKAGNTDLHTFAKHWGNYGLRQFSLAFVGAEDVFAAEQERGIDGRPVMFPGWYRVKEYFENQFDVEQERALMQETGASNDLAMSYLLQPVEDLLSRNYSAVGILEKWETSMTLFNKALKVPSFNWQTASRNLGRKNVDKRLHDEEAHALRAAWDDPVLAKTLWLDIFLYDHAVAVHNKQVEEHGIV 231
BLAST of mRNA_E-siliculosus-1a_F_contig1240.1506.1 vs. uniprot
Match: D7FS84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS84_ECTSI) HSP 1 Score: 263 bits (673), Expect = 4.100e-84 Identity = 137/301 (45.51%), Postives = 198/301 (65.78%), Query Frame = 1
Query: 1 MVKAGGTTVKSLIQSSMKRMHSSMGLYTNHHWMRDRSTVKNGVTTAKSGITYGAYTEALRPHEG---RDCKWFTIFRHPISRLVSAYFYCKQNGWDELCASMVLKAGK--TDLHTFAKHWGNYGLRQFSLAFVGAEDVFATEQERGIDGRPVMF------PGWYRVKEYFENQLDVEQERALIQETGGSNDLA-----LSYLLQPVEDLLSRNYSAVGILEKWETSMNLFNKALKVPNFNWQTASRNLGRKNVDKRLHDEEAQALRAAWDDPVLAKTLWLDILLYDHAVAVHNKQVEEHGI 855
M KAGG+TVK ++ K + ++GLY + W+ + ++ + S + +GAYTE LRP G R+CKWFTIFRHPI RLVSAYFYCK+ D LCA++ L A TDL+ FA+HWG++GLRQF+LAFV E++ A + + G + PGWY +K Y + QLD +++ + GS A +S+LLQPV++LL+ Y+AVG+LE+WETS+ LFN+AL +P F+W ++G+KN D H+EEA+ L +W DP L + L LD+LLYD+AV+VHN+QV+++G+
Sbjct: 1 MNKAGGSTVKYMLAPWTKAQNVTVGLYDSPQWLEGKDFAQDFLGDENS-LMWGAYTEGLRPFGGLGLRECKWFTIFRHPIPRLVSAYFYCKKKPQDGLCATVALDANADDTDLYAFAEHWGDFGLRQFALAFVLPEELLANKVKYDATGICTPYHGKRSCPGWYELKLYLQQQLDEQEQGEGSRGWDGSGAAASGAATISHLLQPVQELLTNEYAAVGVLEQWETSLLLFNEALGMPGFDWPETFGSIGKKNSDGTFHNEEAEMLLRSWTDPRLRRYLSLDLLLYDYAVSVHNQQVDKYGL 300
BLAST of mRNA_E-siliculosus-1a_F_contig1240.1506.1 vs. uniprot
Match: A0A6H5JY77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY77_9PHAE) HSP 1 Score: 240 bits (613), Expect = 1.510e-74 Identity = 132/294 (44.90%), Postives = 173/294 (58.84%), Query Frame = 1
Query: 1 MVKAGGTTVKSLIQSSMKRMHSSMGLYTNHHWMRDRSTVKNGVTTAKSGITYGAYTEALRPHEGRDCKWFTIFRHPISRLVSAYFYCKQNGWDELCASMVLKAGKTDLHTFAKHWGNYGLRQFSLAFVGAEDVFATE-------QERGIDGRPVMFPGWYRVKEYFENQLDVEQERALIQETGGSNDLALSYLLQPVEDLLSRNYSAVGILEKWETSMNLFNKALKVPNFNWQTASRNLGRKNVD-KRLHDEEAQALRAAWDDPVLAKTLWLDILLYDHAVAVHNKQVEEHGIV 858
M K+GG TV+ +I + S L+ + W RS + V + TYG YTE LR ++ RDCKWFT+FRHP+SR+VSAYFYC++ D+LCA++VL A K DL TFA+HWGNYGLRQF+LA + AEDVF E Q RG V P WYR K Y L + + T + LA L ++ LS Y+AVGI+E+W+ SM LFN+ L + F+W + G+KN + AL+AAW P L K +WLDILLYDHA++VH QV + GIV
Sbjct: 58 MNKSGGMTVRKMIMPFLTEKGVSTALFDDIEWSSGRSYAETFVKE-NAVFTYGGYTEGLRMYDDRDCKWFTVFRHPVSRVVSAYFYCQRAHHDQLCAAVVLDASKVDLLTFAEHWGNYGLRQFALASIKAEDVFHNEVVSEFCQQARGHGD--VCIPAWYRQKHY----LHLPHQDDFCGPTQPESGLA--QFLSSAQETLSTRYAAVGIIEEWDNSMELFNRVLNLRRFDWVKEFQKSGKKNSGGSQFETASKSALKAAWHSPELKKFIWLDILLYDHALSVHRSQVADLGIV 342
BLAST of mRNA_E-siliculosus-1a_F_contig1240.1506.1 vs. uniprot
Match: A0A6H5JQY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQY7_9PHAE) HSP 1 Score: 212 bits (540), Expect = 7.530e-64 Identity = 119/291 (40.89%), Postives = 175/291 (60.14%), Query Frame = 1
Query: 1 MVKAGGTTVKSLIQSSMKRMHSSMGLYTNHHWMRDRSTVKNGVTTAKSGITYGAYTEALRPHEG-RDCKWFTIFRHPISRLVSAYFYCKQNGWDELCASMVLKAGKTDLHTFAKHWGNYGLRQFSLAFVGAEDVFATEQERGIDGRPVMFPGWYRVKEYFENQLDVEQER---ALIQETGGSNDLALSYLLQPVEDLLSRNYSAVGILEKWETSMNLFNKALKVPNFNWQTASRNLGRKNVDKRLHDEEAQ--ALRAAWDDPVLAKTLWLDILLYDHAVAVHNKQVEEHGI 855
M KAGGT+++ +I+ ++++G +T+ + V+ + + + +GAYTE LRP+ CKWFT+ RHPI+RLVSA+ YC D+LCA+ + K D++ FA+HWGN+G+ QF+LAF D+ TE V P WY+ K YFE +L + A I ++ + +LQPVE+LL Y+AVGILE+WETSM LF+ AL++P FNW + S + +NV HD +A+ L A+ DPVL + LWLDILLY+HA +VH Q+ +G+
Sbjct: 43 MNKAGGTSIRRMIKDYAAATNTTVGEFTHTQYNAGDRGVQQ-ILDRRPSLIWGAYTEGLRPYATVLGCKWFTMVRHPIARLVSAFNYCGIVPSDQLCATRIHKPEDGDIYDFAEHWGNHGVVQFALAFEDLNDILVTE---------VKSPPWYKAKLYFEGRLGPSGKTSTSANISTKDVCQNVWMPEILQPVEELLRSKYAAVGILEQWETSMMLFDHALQLPGFNWTSTSASSTPRNV----HDSKAKNDLLVASMTDPVLKQILWLDILLYEHACSVHKAQLSRYGL 319
BLAST of mRNA_E-siliculosus-1a_F_contig1240.1506.1 vs. uniprot
Match: A0A6H5JNJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNJ0_9PHAE) HSP 1 Score: 204 bits (520), Expect = 8.010e-61 Identity = 107/286 (37.41%), Postives = 170/286 (59.44%), Query Frame = 1
Query: 7 KAGGTTVKSLIQSSMKRMHSSMGLYTNHHWMRDRSTVKNGVTTAKSGITYGAYTEALRPHEGRDCKWFTIFRHPISRLVSAYFYCKQNGWDELCASMVLKAGKTDLHTFAKHWGNYGLRQFSLAFVGAEDVFATEQERGIDGRPVMFPGWYRVKEYFENQLDVEQERALIQETGGSND---LALSYLLQPVEDLLSRNYSAVGILEKWETSMNLFNKALKVPNFNWQTASRNLGRKNVDKRLHDEEAQALRAAWDDPVLAKTLWLDILLYDHAVAVHNKQVEEHGI 855
KAGGTTVK+ +++ + + ++ L + + R +++ + K + G Y E LR + CKWFT+ RHPI+RL+SA++YC D+LCA+ + K D++ FAKHWGNY L QF+L V ++FA E +D P W++ K YFE +L + ++ + + +LQPVE+LL NY+AVGILE W+ SM LF+ AL++P FNW AS +L + ++ +++A L AA DPVL + +WLD+LLY++A ++H +Q+ + +
Sbjct: 45 KAGGTTVKTHLRNYAESRNETVALCHSDWYARGDKGIQD-LLNDKPVLIAGGYAEGLRTSAFQGCKWFTMMRHPIARLISAFYYCSGGNRDQLCAANIHKPEDGDIYDFAKHWGNYALLQFALGVVDQHEIFAEE----VDA-----PAWFKAKLYFEGRLGYPGNMSTATNRTTHDEWQSVWIPDILQPVEELLRSNYAAVGILEHWQRSMMLFDHALEIPGFNWTVASASLSPRKSQNKIVEKKAM-LAAAMTDPVLRQYVWLDLLLYEYACSLHEEQLRRYDL 319
BLAST of mRNA_E-siliculosus-1a_F_contig1240.1506.1 vs. uniprot
Match: D7G715_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G715_ECTSI) HSP 1 Score: 196 bits (499), Expect = 8.390e-57 Identity = 112/301 (37.21%), Postives = 161/301 (53.49%), Query Frame = 1
Query: 7 KAGGTTVKSLIQSSMKRMHSSMGLYTNHHWMRDRSTVKNGVTTAKSGITY----GAYTEALR------PHEGRD-CKWFTIFRHPISRLVSAYFYCKQNGWDELCASMVLKAGKTDLHTFAKHWGNYGLRQFSLAFVG---AEDVFATEQERGIDGRPV----MFPGWYRVKEYFENQLDVEQERALIQETGGSNDLALSYLLQPVEDLLSRNYSAVGILEKWETSMNLFNKALKVPNFNWQTASRNLGRKNVDKRLHDEEAQALRAAWDDPVLAKTLWLDILLYDHAVAVHNKQVEEHGI 855
KAGGTTVK L+ S S Y ++ W + + ++ + S + G Y EALR P + R C+WFT+FRHP+SRLVSAY+YC+++ D+LCAS + + DL TFA+HWGN+ LRQF+L FV +D + G G + PGWY +K + ++ V + + L Y+ +PV DLL NY+ VGILE W +++LF+ AL +P W+ G+ NVD R E+ L+ A DP + K L LD+ LY AV + N+Q +GI
Sbjct: 96 KAGGTTVKRLLFDSWG---SESTTYDSYQWKKGQGYAESVAASLASPAGWSAAAGGYLEALRRTPAFQPDDERTPCRWFTVFRHPVSRLVSAYYYCREDPSDQLCASEFVSSRNVDLVTFARHWGNFALRQFALGFVSHDKVKDFLVSPNGGGAMGLTAEQVELMPGWYMLKLFLNDRSGVADDTS-------PEGTRLEYMFRPVVDLLRDNYAVVGILEDWNATLSLFDSALDMPGMTWREEFERSGKLNVDTRFKGEKQDVLQQALSDPEIVKHLSLDLRLYGQAVDIFNQQRHSYGI 386
BLAST of mRNA_E-siliculosus-1a_F_contig1240.1506.1 vs. uniprot
Match: D7G716_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G716_ECTSI) HSP 1 Score: 196 bits (497), Expect = 7.380e-56 Identity = 119/297 (40.07%), Postives = 161/297 (54.21%), Query Frame = 1
Query: 7 KAGGTTVKSLIQSSMKRMHSSMGLYTNHHW-MRDRSTVKNGVTTA---KSGITYGAYTEALRPHE--GRDCKWFTIFRHPISRLVSAYFYCKQNGWDELCASMVLKAGKTDLHTFAKHWGNYGLRQFSLAFVGAEDVFATEQERGIDGRPVMFPGWYRVKEYFENQ-------LDVEQERALIQETGGSNDLALSYLLQPVEDLLSRNYSAVGILEKWETSMNLFNKALKVPNFNWQTASRNLGRKNVDKRLHDEEAQALRAAWDDPVLAKTLWLDILLYDHAVAVHNKQVEEHGIV 858
K GG+TVK L++ R S +Y + W D + K G A K + G YTEALR E G C++FT+FRHPI+R+VSAYFYC+ D CAS V++A DL TFAKHWGN+ LRQF+L FV ++DV QE Y++K Y E L + Q+ + D L LLQP DL+ Y AVGILE+W T++ LF+ L +P NW+ G+ +VD E + L+ AW D L K + LD+LLY+HAV V ++Q HG++
Sbjct: 185 KCGGSTVKDLLED---RWGSRFFIYDSMRWKFGDEFSAKFGAKLALGDKWNVMTGGYTEALRLSEPVGAGCRFFTLFRHPIARMVSAYFYCRSVSGDVACASEVMQAKDVDLLTFAKHWGNFALRQFALGFVPSDDV----QE-------------YQLKMYLERPQKEDGGVLGQREAMTAHQDAAATPDAPLYELLQPAMDLVRDGYVAVGILEQWNTTLRLFDHTLDMPVMNWEEQFAESGKHHVDIVNKQLEIETLQQAWTDSELKKYMRLDLLLYEHAVDVFHQQARSHGLL 461
BLAST of mRNA_E-siliculosus-1a_F_contig1240.1506.1 vs. uniprot
Match: D7FWQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWQ3_ECTSI) HSP 1 Score: 195 bits (496), Expect = 1.040e-55 Identity = 115/301 (38.21%), Postives = 171/301 (56.81%), Query Frame = 1
Query: 7 KAGGTTVKSLIQSSMKRMHSSMGLYTNHHW-MRDRSTVKNGVTTAKS---GITYGAYTEALRPHEGRD--CKWFTIFRHPISRLVSAYFYCKQNGWDELCASMVLKAGKTDLHTFAKHWGNYGLRQFSLAFV---GAEDVFATEQERGI-DGRPVMFPGWYRVKEYFENQ------LDVEQERALIQETGGSNDLALSY-LLQPVEDLLSRNYSAVGILEKWETSMNLFNKALKVPNFNWQTASRNLGRKNVDKRLHDEEAQALRAAWDDPVLAKTLWLDILLYDHAVAVHNKQVEEHGIV 858
K GG+TVK +++ S +S +Y ++ W + D + GV A+ + G YTEALR E D C++FT+FRHPI+R+VSAYFYC+ D CAS V+ A DL TFAKHWGN+ +RQF+L FV G ++ T + + + D GWY++K Y E + + E ++ + A Y LLQP DL+ Y AVGILE+W T+++LF+ AL++P W G++ VD + E++ L+ AW D L K + LD+LLY+HAV V ++Q +G++
Sbjct: 164 KCGGSTVKYMLRRSYGSRYS---IYDSNQWKLGDDISANFGVKLARGETWNVMAGGYTEALRRSEPVDAGCRFFTLFRHPIARMVSAYFYCRSTLGDAACASEVVDAKDVDLLTFAKHWGNFAVRQFALGFVPSDGVQEYIRTPEAQALHDFDLKKIAGWYQLKMYLERPEKGDWGVPGQSEAMTVEHDAAATLEAPLYDLLQPAMDLIRSGYVAVGILEQWNTTLHLFDHALEIPGMYWGAQFAEGGKQRVDYKNKRLESETLKQAWTDSELKKYMRLDLLLYEHAVDVFHEQARGYGLL 461
BLAST of mRNA_E-siliculosus-1a_F_contig1240.1506.1 vs. uniprot
Match: D8LU75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU75_ECTSI) HSP 1 Score: 146 bits (369), Expect = 5.860e-39 Identity = 91/246 (36.99%), Postives = 129/246 (52.44%), Query Frame = 1
Query: 127 VTTAKSGITYGAYTEALRPHEGRDCKWFTIFRHPISRLVSAYFYCKQNGWDELCASMVLKAGKTDLHTFAKHWGNYGLRQFSLAFVGAEDVFATEQERGIDGRPVMFPGWYRVKEYFENQLDVEQERALIQETGGSNDLALSYLLQPVEDLLSRNYSAVGILEKWETSMNLFNKALKVPNFNWQTASRNLGRKNVDKRLHD---EEAQALRAAWDDPVLAKTLWLDILLYDHAVAVHNKQVEEHGI 855
V ++ + +G E+LR H+GR CKW TIFRHPI+RL+SAY +C D +C T L FA+ WGN+ +RQF+LA V V +R M WY VKEY G + D L L+PV+ LLS Y+AVGI ++ +T+M LF+KAL + +W ++ LG DK+ + E++ R A ++P + L LD+ LY+HAV V QV + GI
Sbjct: 39 VMASRWKLLHGGCVESLRNHKGRSCKWITIFRHPIARLLSAYDHCLGAPKDPVCPP----TESTGLAAFAELWGNFAMRQFALAAVSPSAVKEWAAQRQARTGTSM---WYLVKEYLARG-------------GIAEDEVLGSKLEPVKGLLSTQYAAVGIAQELKTTMVLFSKALSMEGLDWSSSWATLGINEEDKQDSEYDITESEPFRQALENPRIVSALRLDMSLYEHAVHVFKDQVAQFGI 264
BLAST of mRNA_E-siliculosus-1a_F_contig1240.1506.1 vs. uniprot
Match: A0A6H5JQM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM0_9PHAE) HSP 1 Score: 142 bits (358), Expect = 3.950e-35 Identity = 87/239 (36.40%), Postives = 123/239 (51.46%), Query Frame = 1
Query: 148 ITYGAYTEALRPHEGRDCKWFTIFRHPISRLVSAYFYCKQNGWDELCASMVLKAGKTDLHTFAKHWGNYGLRQFSLAFVGAEDVFATEQERGIDGRPVMFPGWYRVKEYFENQLDVEQERALIQETGGSNDLALSYLLQPVEDLLSRNYSAVGILEKWETSMNLFNKALKVPNFNWQTASRNLG---RKNVDKRLHDEEAQALRAAWDDPVLAKTLWLDILLYDHAVAVHNKQVEEHGI 855
+ +G E+LR H+ R CKW TIFRHPI+RL+SAY +C + D +C T L FA+ WGN+ +RQF+L V V +R M WY VKEY G + D L +L+PV+ LLS Y+AVGI ++ ET+M LF+KAL + +W ++ LG D E++ R A ++P + L LD+ LY+HA+ V QV + GI
Sbjct: 324 LLHGGCVESLRNHKERSCKWLTIFRHPIARLLSAYHHCLEAPKDPVCPP----TESTGLVVFAELWGNFAMRQFALESVSPSAVKEWAAQRQARTGTSM---WYLVKEYLARG-------------GIAEDEVLESMLEPVKGLLSTQYAAVGIAQELETTMVLFSKALSMEGLDWSSSWATLGINEEVKQDSEYDIAESEPFRQALENPRIVSALRLDMSLYEHAMHVFKDQVAQFGI 542 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1240.1506.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1240.1506.1 >prot_E-siliculosus-1a_F_contig1240.1506.1 ID=prot_E-siliculosus-1a_F_contig1240.1506.1|Name=mRNA_E-siliculosus-1a_F_contig1240.1506.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=287bp MVKAGGTTVKSLIQSSMKRMHSSMGLYTNHHWMRDRSTVKNGVTTAKSGIback to top mRNA from alignment at E-siliculosus-1a_F_contig1240:7185..8894- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1240.1506.1 ID=mRNA_E-siliculosus-1a_F_contig1240.1506.1|Name=mRNA_E-siliculosus-1a_F_contig1240.1506.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1710bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1240:7185..8894- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1240:7185..8894- >mRNA_E-siliculosus-1a_F_contig1240.1506.1 ID=mRNA_E-siliculosus-1a_F_contig1240.1506.1|Name=mRNA_E-siliculosus-1a_F_contig1240.1506.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1722bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1240:7185..8894- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |