prot_E-siliculosus-1a_F_contig1219.1383.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1219.1383.1
Unique Nameprot_E-siliculosus-1a_F_contig1219.1383.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length730
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1219.1383.1 vs. uniprot
Match: D8LMH1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMH1_ECTSI)

HSP 1 Score: 1169 bits (3025), Expect = 0.000e+0
Identity = 639/729 (87.65%), Postives = 643/729 (88.20%), Query Frame = 0
Query:    1 MHRAGSDSGESRGHSRDPGSSDSDEEDTNADTMDLQEAGDERSGSRSRSRTRNGWATDSQGEASTIAFKLHDKTRIGDSYQVVTIPGLRARTAEAKQEDLKIAPEKDHLLWDSSRAPDERRLQQLVKRLRIGSGRDDGGRPTSLLTHADVVAALHRCKYDPASAEASLVGLQRRRETKHKSASASSDARKLQHSRGDVSAEEATSPEDSATAQKSSNNISSIAPGGEPCTGKSDVGGNRWEDWSEADRAAFLVHLGDKHKDMNDVAEEFTTKSHGDVIEFYYNWKFHEPDYSRWQLMKRQIDIALTFPDFHQDICEACEEGGELLLCDTCSLAFHLRCLNPRLEDPPDNDWSCPECMRKHVTPETRARAKLFVKQRIVSIEEERRCMAQEEERRHERQALYGYLGQASAGIEHGHKRGGGASASNAENRRQRIMGHEEAEAQAERELSNRPWAKEDLAQLQRAVDEFGERGWRAMMANEKHKSLFHMRSPFIVKSMHRMLKDNELKRAKARARMAARADXXXXXXXXXXXXXDGDPAKDFCREAVSFAEADAAAAAVAMARTEAHESVDHPGEEAGGEGTFDDKSRARERRALLQKLIMDHGVGGLKTKLDMPVYSALKEEGSQSALINHWRSMQHRLRRRLERLGMVPKRKPGRPPKNPPTQQYPGFEAAYPGSTNAGAPTTQATGNNERGDLPREEDHGGERSRKRVRTEEKTENEQLPAASMRMQL 729
            MHRA SDSGESRGHSRDPGSSDSDEEDTN DTMDLQEAGDERSGSRSRSRTRNGWATDSQGEASTIA KLHDKTRIGDSYQ VTIPGLRARTAEAKQEDLKIAPEKDHLLWDSSRAPDERRLQQLVKRLRIGSGRDDGGRPTSLLTHADVVAALHRCKYDPASAEASLVGLQRRRETKHKSASAS DARKLQHSRGDVSAE ATSPEDSATAQKSSN ISSIAPGGEPCTGKSDVGGNRWEDWSEADRA FLVHLGDKHKDMNDVAEEF TKSHGDVIEFYYNWKFHEPDYSRWQLMKRQIDIAL                                                             ARAKLFVKQRIVSIEEERRCMAQEEERRHERQALYGYLGQASAGIEHGHKRGGGASASNAENRRQRIMGHEEAEAQAERELSNRPWAKEDLAQLQRAVDEFGERGWRAMMANEKHKSLFHMRSPFIVKSMHRMLKDNELKRAKARARMAARAD    XX       DGDPAKDFCREAVSFAEADAAAAAVAMARTEAHESVD+PGEEAGG GTFDDKSRARERRALLQKLIM+HGVGG+KTKLDMPVYSALKEEGSQS LINHWRSMQHRLRRRLERLGMVPKRKPGRPPKNPPT+QYPGFEAAYPGSTN GAPTTQATGNNERGDLPREEDHGGERSRKR RTEEK ENEQLPAASMRMQL
Sbjct:    1 MHRAASDSGESRGHSRDPGSSDSDEEDTNVDTMDLQEAGDERSGSRSRSRTRNGWATDSQGEASTIAVKLHDKTRIGDSYQAVTIPGLRARTAEAKQEDLKIAPEKDHLLWDSSRAPDERRLQQLVKRLRIGSGRDDGGRPTSLLTHADVVAALHRCKYDPASAEASLVGLQRRRETKHKSASASGDARKLQHSRGDVSAEAATSPEDSATAQKSSNQISSIAPGGEPCTGKSDVGGNRWEDWSEADRATFLVHLGDKHKDMNDVAEEFATKSHGDVIEFYYNWKFHEPDYSRWQLMKRQIDIAL-------------------------------------------------------------ARAKLFVKQRIVSIEEERRCMAQEEERRHERQALYGYLGQASAGIEHGHKRGGGASASNAENRRQRIMGHEEAEAQAERELSNRPWAKEDLAQLQRAVDEFGERGWRAMMANEKHKSLFHMRSPFIVKSMHRMLKDNELKRAKARARMAARADTKAKXXGDAIAGADGDPAKDFCREAVSFAEADAAAAAVAMARTEAHESVDNPGEEAGGAGTFDDKSRARERRALLQKLIMEHGVGGVKTKLDMPVYSALKEEGSQSVLINHWRSMQHRLRRRLERLGMVPKRKPGRPPKNPPTKQYPGFEAAYPGSTNVGAPTTQATGNNERGDLPREEDHGGERSRKRARTEEKAENEQLPAASMRMQL 668          
BLAST of mRNA_E-siliculosus-1a_F_contig1219.1383.1 vs. uniprot
Match: A0A4D9CS67_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CS67_9STRA)

HSP 1 Score: 105 bits (263), Expect = 9.550e-21
Identity = 48/139 (34.53%), Postives = 80/139 (57.55%), Query Frame = 0
Query:  243 WSEADRAAFLVHLGDKHKDMNDVAEEFTTKSHGDVIEFYYNWKFHEPDYSRWQLMKRQIDIALTFPDFHQDICEACEEGGELLLCDTCSLAFHLRCLNPRLEDPPDNDWSCPECMRKHVTPETRARAKLFVKQRIVSIE 381
            WS+ + A F+  + +  K+   +      +S  DV+  +Y WK    DY  W+  +    +    PD+H D+C+ CE  G+LL CDTC+LAFH++CL  R ED P+ D+SC +C  +++T   R RAK +V+ ++  ++
Sbjct:  168 WSQEEEAVFVEGMNEYDKNFVQIKALLPKRSVQDVVAHFYEWK-QRADYRAWKADRPLQYLEHAIPDYHADVCDMCERPGDLLCCDTCNLAFHMKCLGFRDEDVPE-DFSCSQCQAQYLTTSERERAKRWVESKVRKVQ 304          
BLAST of mRNA_E-siliculosus-1a_F_contig1219.1383.1 vs. uniprot
Match: W7TMX5_9STRA (Nucleosome-remodeling factor subunit, putative n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TMX5_9STRA)

HSP 1 Score: 107 bits (267), Expect = 1.900e-20
Identity = 51/147 (34.69%), Postives = 83/147 (56.46%), Query Frame = 0
Query:  235 VGGNRWEDWSEADRAAFLVHLGDKHKDMNDVAEEFTTKSHGDVIEFYYNWKFHEPDYSRWQLMKRQIDIALTFPDFHQDICEACEEGGELLLCDTCSLAFHLRCLNPRLEDPPDNDWSCPECMRKHVTPETRARAKLFVKQRIVSIE 381
            V  NR   WS+ + A F+  + +  K+   +      +S  DV+  +Y WK    DY  W+  +    +    PD+H D+C+ CE  G+LL CDTC+LAFH++CL  R ED P+ D+SC +C  +++T   R RAK +V+ ++  ++
Sbjct:  357 VDANRRMAWSQEEEALFVEGMNEYDKNFVQIKALLPKRSVQDVVAHFYEWK-QRADYRAWKADRPLQYLEHAIPDYHADVCDMCERPGDLLCCDTCNLAFHMKCLGFRDEDVPE-DFSCSQCQAQYLTTSERERAKRWVESKVRKVQ 501          
BLAST of mRNA_E-siliculosus-1a_F_contig1219.1383.1 vs. uniprot
Match: A0A7S1C3G3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C3G3_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 2.250e-17
Identity = 52/127 (40.94%), Postives = 72/127 (56.69%), Query Frame = 0
Query:  243 WSEADRAAFLVHLGDKHKDMNDVAEEFTTKSHGDVIEFYYN-WKFHEPDYSRWQLMKRQIDIALTFPDFHQDICEACEEGGELLLCDTCSLAFHLRCLNPRLEDPPDNDWSCPECMRKHVTPETRAR 368
            WS A+ A F + LG   K    VA +   ++  + +E++Y  WK   P +S+W   KR +  +L   +FH D+C  C  GG+LL CD+CSLAFH+ CL P L D P+ DW+CP C    V    RAR
Sbjct:   62 WSAAESALFELGLGRYGKFFGLVAMDIPHRTARECVEYFYGVWK-KLPRHSQW---KRGLGRSL---EFHDDVCAVCGSGGDLLCCDSCSLAFHVSCLRPPLFDLPEEDWACPRCRELSVPELERAR 181          
BLAST of mRNA_E-siliculosus-1a_F_contig1219.1383.1 vs. uniprot
Match: A0A7R9UFM1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFM1_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 2.920e-15
Identity = 34/80 (42.50%), Postives = 54/80 (67.50%), Query Frame = 0
Query:  303 IALTFPDFHQDICEACEEGGELLLCDTCSLAFHLRCLNPRLEDPPDNDWSCPECMRKHVTPETRARAKLFVKQRIVSIEE 382
            +    PD+H D+CE C+EGG+++ CDTC+L++H  CL P+LED P+  W CP C  K V+    A+AK +V +++  ++E
Sbjct:    4 VEEDIPDWHNDVCEICDEGGDIICCDTCNLSYHGSCLEPKLEDVPEF-WMCPACRVKFVSAADIAKAKEYVNRQVERVQE 82          
BLAST of mRNA_E-siliculosus-1a_F_contig1219.1383.1 vs. uniprot
Match: T1I428_RHOPR (Uncharacterized protein (Fragment) n=2 Tax=Rhodnius prolixus TaxID=13249 RepID=T1I428_RHOPR)

HSP 1 Score: 91.7 bits (226), Expect = 3.400e-15
Identity = 48/125 (38.40%), Postives = 66/125 (52.80%), Query Frame = 0
Query:  244 SEADRAAFLVHLGDKHKDMNDVAEEFTTKSHGDVIEFYYNWKFHEPD---YSRWQLMKRQIDIALTF---------PDFHQDICEACEEGGELLLCDTCSLAFHLRCLNPRLEDPPDNDWSCPEC 356
            S+A+    L    + +K+  + AEE TT S  +V   +Y   F+ P    +  W     +ID    F         P  HQD CE C++GGE++LCDTC  A+HL CL+P LED P+  WSCP C
Sbjct:  169 SDAEFEQMLAEAEEVNKEATEEAEEQTTGSGENVFSLFY---FYYPALGIHITWIYPMLRIDSNTAFLTTFGIRDSPTDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEDTPEGKWSCPHC 290          
BLAST of mRNA_E-siliculosus-1a_F_contig1219.1383.1 vs. uniprot
Match: A0A820U061_9BILA (Hypothetical protein n=1 Tax=Rotaria magnacalcarata TaxID=392030 RepID=A0A820U061_9BILA)

HSP 1 Score: 86.3 bits (212), Expect = 9.380e-15
Identity = 34/59 (57.63%), Postives = 43/59 (72.88%), Query Frame = 0
Query:  311 HQDICEACEEGGELLLCDTCSLAFHLRCLNPRLEDPPDNDWSCPECMRKHVTPETRARA 369
            HQD CE C++GGE++LCDTC  A+HL CL+P LE  P+ DWSCPEC +  +T  TR  A
Sbjct:    3 HQDYCEVCQQGGEIILCDTCPKAYHLVCLDPELEQAPEGDWSCPECTKNGITIRTRQAA 61          
BLAST of mRNA_E-siliculosus-1a_F_contig1219.1383.1 vs. uniprot
Match: A0A7S3LRW5_9STRA (Hypothetical protein n=2 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LRW5_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 2.450e-14
Identity = 42/87 (48.28%), Postives = 55/87 (63.22%), Query Frame = 0
Query:  275 GDVIEFYYN-WKFHEPDYSRWQLMKRQIDIALTFP-DFHQDICEACEEGGELLLCDTCSLAFHLRCLNPRLEDPPDNDWSCPECMRK 359
            G VI +YY+ WKF    Y  W+L  R     +  P +FH DICEAC + GE++ CD+C+L FH  CLNP L   P++DWSCP C+ K
Sbjct:  603 GSVIYYYYSHWKFSNA-YETWRLFVRS---RVESPQEFHNDICEACNQAGEVICCDSCNLVFHNGCLNPPLIKIPEDDWSCPVCVEK 685          
BLAST of mRNA_E-siliculosus-1a_F_contig1219.1383.1 vs. uniprot
Match: A0A0S7LFD7_9TELE (CHD5 (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7LFD7_9TELE)

HSP 1 Score: 79.7 bits (195), Expect = 4.820e-14
Identity = 30/62 (48.39%), Postives = 43/62 (69.35%), Query Frame = 0
Query:  298 KRQIDIALTFPDFHQDICEACEEGGELLLCDTCSLAFHLRCLNPRLEDPPDNDWSCPECMRK 359
            KR+ +    +   HQD CE C++GGE++LCDTC  A+HL CL+P LE  P+  WSCP C+++
Sbjct:   66 KRKKEDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCVKR 127          
BLAST of mRNA_E-siliculosus-1a_F_contig1219.1383.1 vs. uniprot
Match: A0A7D9J5R6_PARCT (Chromodomain-helicase-DNA-binding 4-like isoform X3 (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9J5R6_PARCT)

HSP 1 Score: 84.7 bits (208), Expect = 5.240e-14
Identity = 32/48 (66.67%), Postives = 41/48 (85.42%), Query Frame = 0
Query:  309 DFHQDICEACEEGGELLLCDTCSLAFHLRCLNPRLEDPPDNDWSCPEC 356
            D HQD CE CEE GELLLCDTC+L+FHL+CL+P L++ P+ +WSCP+C
Sbjct:  291 DQHQDYCEVCEESGELLLCDTCTLSFHLQCLDPPLDEAPEGEWSCPKC 338          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1219.1383.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMH1_ECTSI0.000e+087.65Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A4D9CS67_9STRA9.550e-2134.53Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7TMX5_9STRA1.900e-2034.69Nucleosome-remodeling factor subunit, putative n=1... [more]
A0A7S1C3G3_9STRA2.250e-1740.94Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7R9UFM1_9STRA2.920e-1542.50Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
T1I428_RHOPR3.400e-1538.40Uncharacterized protein (Fragment) n=2 Tax=Rhodniu... [more]
A0A820U061_9BILA9.380e-1557.63Hypothetical protein n=1 Tax=Rotaria magnacalcarat... [more]
A0A7S3LRW5_9STRA2.450e-1448.28Hypothetical protein n=2 Tax=Aplanochytrium stocch... [more]
A0A0S7LFD7_9TELE4.820e-1448.39CHD5 (Fragment) n=1 Tax=Poeciliopsis prolifica Tax... [more]
A0A7D9J5R6_PARCT5.240e-1466.67Chromodomain-helicase-DNA-binding 4-like isoform X... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 426..446
NoneNo IPR availableGENE3D1.10.10.60coord: 234..300
e-value: 9.4E-9
score: 37.0
NoneNo IPR availablePANTHERPTHR24102PHD FINGER PROTEINcoord: 311..400
NoneNo IPR availablePANTHERPTHR24102:SF28coord: 311..400
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 314..357
e-value: 4.5E-12
score: 56.1
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 311..446
e-value: 1.6E-18
score: 69.3
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 314..358
e-value: 1.6E-10
score: 40.7
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 312..359
score: 10.407
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 315..356
IPR017884SANT domainPROSITEPS51293SANTcoord: 238..289
score: 9.851
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 310..368

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1219contigE-siliculosus-1a_F_contig1219:1616..8116 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1219.1383.1mRNA_E-siliculosus-1a_F_contig1219.1383.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1219 1027..12510 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1219.1383.1 ID=prot_E-siliculosus-1a_F_contig1219.1383.1|Name=mRNA_E-siliculosus-1a_F_contig1219.1383.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=730bp
MHRAGSDSGESRGHSRDPGSSDSDEEDTNADTMDLQEAGDERSGSRSRSR
TRNGWATDSQGEASTIAFKLHDKTRIGDSYQVVTIPGLRARTAEAKQEDL
KIAPEKDHLLWDSSRAPDERRLQQLVKRLRIGSGRDDGGRPTSLLTHADV
VAALHRCKYDPASAEASLVGLQRRRETKHKSASASSDARKLQHSRGDVSA
EEATSPEDSATAQKSSNNISSIAPGGEPCTGKSDVGGNRWEDWSEADRAA
FLVHLGDKHKDMNDVAEEFTTKSHGDVIEFYYNWKFHEPDYSRWQLMKRQ
IDIALTFPDFHQDICEACEEGGELLLCDTCSLAFHLRCLNPRLEDPPDND
WSCPECMRKHVTPETRARAKLFVKQRIVSIEEERRCMAQEEERRHERQAL
YGYLGQASAGIEHGHKRGGGASASNAENRRQRIMGHEEAEAQAERELSNR
PWAKEDLAQLQRAVDEFGERGWRAMMANEKHKSLFHMRSPFIVKSMHRML
KDNELKRAKARARMAARADTKAKARGDATAGADGDPAKDFCREAVSFAEA
DAAAAAVAMARTEAHESVDHPGEEAGGEGTFDDKSRARERRALLQKLIMD
HGVGGLKTKLDMPVYSALKEEGSQSALINHWRSMQHRLRRRLERLGMVPK
RKPGRPPKNPPTQQYPGFEAAYPGSTNAGAPTTQATGNNERGDLPREEDH
GGERSRKRVRTEEKTENEQLPAASMRMQL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011011Znf_FYVE_PHD
IPR017884SANT_dom
IPR019786Zinc_finger_PHD-type_CS
IPR019787Znf_PHD-finger
IPR036427Bromodomain-like_sf
IPR001965Znf_PHD