mRNA_E-siliculosus-1a_F_contig10128.138.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig10128.138.1
Unique NamemRNA_E-siliculosus-1a_F_contig10128.138.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10128.138.1 vs. uniprot
Match: A0A7M1KEL5_9PSED (Lipoprotein n=3 Tax=Pseudomonas TaxID=286 RepID=A0A7M1KEL5_9PSED)

HSP 1 Score: 239 bits (609), Expect = 1.470e-75
Identity = 125/248 (50.40%), Postives = 170/248 (68.55%), Query Frame = 1
Query:    1 MPRLILYFLLVLTFPILSGCNGQQSLYDDLSQGSANEVMAELISNGIPVKSRRSDSGFSVLIHQSDTARAVHILSTAGLPREPRADLGSTFEKAGIISTPFEERARYIYALAQEMESTLTQIDGVTQARVQVVLPDRIAPGEPVHPASASVFIKHNAFLTPDAIHPRIRQLVMSSIPGLSQQGGNSSRVSIVFVPTREFADTGPEMTYFGPYLIPRHAANFWKMTLVISSIVVLLLCAGIGWLLWRRR 744
            M R +   +L+ T  +LSGC     L+ ++S+  ANEV+AEL    I  +      G +V +  +D +RAV  L  AGLPR  R+ LG  F K G+ISTP EERARYIYAL+QE+ESTL+ IDGV  ARV VVLP+R+APGEPV PASASVFIKHN  L PD I+PR+R++V SSIPG++    N+++++++FVP   + +   ++T+FGP+L+P     FW+ +LV   IV+LL   GIGWL+WRRR
Sbjct:    1 MFRRLTTLVLLSTVLMLSGCGESVELHRNISEQEANEVIAELADKQIRAQKIPGKDGVAVRVKANDISRAVRTLDAAGLPRTARSTLGDIFRKEGVISTPLEERARYIYALSQELESTLSNIDGVIVARVHVVLPERVAPGEPVQPASASVFIKHNPRLDPDNINPRVRRMVASSIPGMASAIDNTTKLTVIFVPATAYTEQ-QQLTHFGPFLVPVQELGFWRTSLVAPVIVILL--GGIGWLVWRRR 245          
BLAST of mRNA_E-siliculosus-1a_F_contig10128.138.1 vs. uniprot
Match: UPI0015A03CDD (type III secretion inner membrane ring lipoprotein SctJ n=1 Tax=Pseudomonas costantinii TaxID=168469 RepID=UPI0015A03CDD)

HSP 1 Score: 233 bits (595), Expect = 1.940e-73
Identity = 124/248 (50.00%), Postives = 173/248 (69.76%), Query Frame = 1
Query:    1 MPRLILYFLLVLTFPILSGCNGQQSLYDDLSQGSANEVMAELISNGIPVKSRRSDSGFSVLIHQSDTARAVHILSTAGLPREPRADLGSTFEKAGIISTPFEERARYIYALAQEMESTLTQIDGVTQARVQVVLPDRIAPGEPVHPASASVFIKHNAFLTPDAIHPRIRQLVMSSIPGLSQQGGNSSRVSIVFVPTREFADTGPEMTYFGPYLIPRHAANFWKMTLVISSIVVLLLCAGIGWLLWRRR 744
            +  LIL+ L+++    L+GC     L+ ++S+  ANEV+AEL    I  +      G +V +  SD +RAV  L  AGLPR  R+ LG  F K G+ISTP EERARYIYAL+QE+ESTL++IDGV  ARV VVLP+R+APGEPV PASASVFIKH+  L PD I+PR+R++V+SSIPG++    N++++++VFVP   + +   ++TY GP+L+P     FW+ +  ++ +VVL+L  GIGWLLWRRR
Sbjct:    5 LTTLILFSLVLM----LTGCGESVELHRNISESEANEVIAELADKQIRAQKIPGKDGVAVRVKASDISRAVRTLDAAGLPRLARSTLGDIFRKEGVISTPLEERARYIYALSQELESTLSKIDGVIVARVHVVLPERVAPGEPVQPASASVFIKHDPRLDPDNINPRVRRMVVSSIPGMASAIDNTTKLTVVFVPATAYKER-QQLTYLGPFLVPEQDLGFWRAS-AMAPLVVLML-GGIGWLLWRRR 245          
BLAST of mRNA_E-siliculosus-1a_F_contig10128.138.1 vs. uniprot
Match: A0A0A7JTL7_9PSED (Lipoprotein n=2 Tax=Pseudomonas parafulva TaxID=157782 RepID=A0A0A7JTL7_9PSED)

HSP 1 Score: 234 bits (596), Expect = 3.510e-73
Identity = 119/231 (51.52%), Postives = 158/231 (68.40%), Query Frame = 1
Query:   46 ILSGCNGQQSLYDDLSQGSANEVMAELISNGIPVKSRRSDSGFSVLIHQSDTARAVHILSTAGLPREPRADLGSTFEKAGIISTPFEERARYIYALAQEMESTLTQIDGVTQARVQVVLPDRIAPGEPVHPASASVFIKHNAFLTPDAIHPRIRQLVMSSIPGLSQQGGNSSRVSIVFVPTREFADTGPEMTYFGPYLIPRHAANFWKMTLVISSIVVLLLCAGIGWLLWR 738
            +L+ C  + +L+  LS+  ANEV+A+L  N I    R    G SVL+  +D   AV +L  AGLPR  RA LG  F K G+ISTP EERARYIYAL+QE+ESTL+QIDGV  ARV VVLP+R+APGEPV PASASVFIKH   L PD+I PR+R L+ S IPG++    N+S++S+VFVPT  + +   EM  FGP+L+      +W+  +V++ IV+L L  G+G+ L+R
Sbjct:   14 LLTACEERSTLHSRLSEQDANEVIAQLADNDIQASKRTEKDGMSVLVAPADLNSAVRVLEAAGLPRRSRASLGDIFRKEGVISTPLEERARYIYALSQELESTLSQIDGVVLARVHVVLPERVAPGEPVQPASASVFIKHTGALDPDSITPRVRNLIASGIPGMADAAHNTSKLSVVFVPTLPYQERR-EMAPFGPFLMKAEDVGYWRTVMVVTGIVLLSLLLGVGYGLYR 243          
BLAST of mRNA_E-siliculosus-1a_F_contig10128.138.1 vs. uniprot
Match: A0A2P8LBR5_9PSED (Lipoprotein n=6 Tax=Pseudomonas TaxID=286 RepID=A0A2P8LBR5_9PSED)

HSP 1 Score: 232 bits (592), Expect = 5.520e-73
Identity = 118/233 (50.64%), Postives = 159/233 (68.24%), Query Frame = 1
Query:   46 ILSGCNGQQSLYDDLSQGSANEVMAELISNGIPVKSRRSDSGFSVLIHQSDTARAVHILSTAGLPREPRADLGSTFEKAGIISTPFEERARYIYALAQEMESTLTQIDGVTQARVQVVLPDRIAPGEPVHPASASVFIKHNAFLTPDAIHPRIRQLVMSSIPGLSQQGGNSSRVSIVFVPTREFADTGPEMTYFGPYLIPRHAANFWKMTLVISSIVVLLLCAGIGWLLWRRR 744
            +LSGC     L+ ++S+  ANEV+AEL    I  +      G +V +  SD +RAV  L  AGLP+  R+ LG  F K G+ISTP EERARYIYAL+QE+ESTL+ IDGV  ARV VVLP+R+APGEPV PASASVFIKH+  L PD I+PR+R+LV SSIPG++    N+++++++FVP   + +   ++TY GP+L+P     FW+ +L+   I+ L   AGI WL WRRR
Sbjct:   16 MLSGCGDSVELHRNISEQEANEVIAELADKQIRAQKVPGKDGVAVRVKASDISRAVRTLDAAGLPKTARSTLGDIFRKEGVISTPLEERARYIYALSQELESTLSNIDGVIVARVHVVLPERVAPGEPVQPASASVFIKHDPRLDPDNINPRVRRLVASSIPGMASAIDNTTKLTVIFVPATAYTEQ-QQLTYLGPFLVPEQDLGFWRASLIAPLIIAL--SAGIAWLFWRRR 245          
BLAST of mRNA_E-siliculosus-1a_F_contig10128.138.1 vs. uniprot
Match: A0A4Y9TIY4_PSEFL (Lipoprotein n=5 Tax=Pseudomonas TaxID=286 RepID=A0A4Y9TIY4_PSEFL)

HSP 1 Score: 231 bits (589), Expect = 1.520e-72
Identity = 115/232 (49.57%), Postives = 162/232 (69.83%), Query Frame = 1
Query:   46 ILSGCNGQQSLYDDLSQGSANEVMAELISNGIPVKSRRSDSGFSVLIHQSDTARAVHILSTAGLPREPRADLGSTFEKAGIISTPFEERARYIYALAQEMESTLTQIDGVTQARVQVVLPDRIAPGEPVHPASASVFIKHNAFLTPDAIHPRIRQLVMSSIPGLSQQGGNSSRVSIVFVPTREFADTGPEMTYFGPYLIPRHAANFWKMTLVISSIVVLLLCAGIGWLLWRR 741
            +L+GC     L+ ++S+  ANEV+AEL    I  +      G +V ++ SD +RAV  L  AGLPR  R+ LG  F K G+ISTP EERARYIYAL+QE+ESTL+ IDGV  ARV VVLP+R+APGEPV PASASVFIKH+  L PD I+PR+R++V SSIPG++    N+ +++++FVP   + +   ++ YFGP+L+P H   FW+ ++++  + ++L  AG+GW LWRR
Sbjct:   16 MLTGCGESVELHRNISEQEANEVIAELADKQIRAQKIPGKDGVAVRVNASDISRAVRTLDAAGLPRLARSTLGDVFRKEGVISTPLEERARYIYALSQELESTLSNIDGVIVARVHVVLPERVAPGEPVQPASASVFIKHDPRLDPDKINPRVRRMVASSIPGMASALDNTVKLTVIFVPAIAYKEE-QQLVYFGPFLVPEHDLGFWRASVLLPLVALIL--AGVGWRLWRR 244          
BLAST of mRNA_E-siliculosus-1a_F_contig10128.138.1 vs. uniprot
Match: A0A1H0GQZ1_9PSED (Lipoprotein n=3 Tax=Pseudomonadaceae TaxID=135621 RepID=A0A1H0GQZ1_9PSED)

HSP 1 Score: 231 bits (588), Expect = 1.900e-72
Identity = 123/253 (48.62%), Postives = 168/253 (66.40%), Query Frame = 1
Query:    1 MPRLILYFLLVLTFPILSGCNGQQSLYDDLSQGSANEVMAELISNGIPVKSRRSDSGFSVLIHQSDTARAVHILSTAGLPREPRADLGSTFEKAGIISTPFEERARYIYALAQEMESTLTQIDGVTQARVQVVLPDRIAPGEPVHPASASVFIKHNAFLTPDAIHPRIRQLVMSSIPGLSQQGGNSSRVSIVFVPTREFADTGPEMTYFGPYLIPRHAANFWKMTLVISSIVVLLLCAGIGWLLWRRRMSAAA 759
            M R +   LL+L    LSGC     L+ ++S+  ANE++AEL    I  +  +   G +V +  SD  RAV  L   GLP+  R+ LG  F K G+ISTP EERARYIYAL+QE+E+TL+ IDGV  ARV VVLP+RIAPGEPV PASASVFIKH+  L PD I+ R+R++V SS+PG++    N+ ++++VFVP   + +   ++TY GP+LIP     FW+++L++   +VLL   GIGWLLWRR+  A A
Sbjct:    1 MYRRLSTLLLILLALTLSGCGESVELHRNISEQEANEIIAELADKQIRAQKIQGKDGVAVRVKASDINRAVRTLDAVGLPKVTRSTLGEIFRKEGVISTPLEERARYIYALSQELEATLSNIDGVVVARVHVVLPERIAPGEPVQPASASVFIKHDPRLDPDNINARVRRMVASSLPGMASAIDNTVKLTVVFVPATPYQEK-QQLTYLGPFLIPEQDLGFWRLSLLMP--LVLLFTGGIGWLLWRRKRLAPA 250          
BLAST of mRNA_E-siliculosus-1a_F_contig10128.138.1 vs. uniprot
Match: A0A0W0MRL5_PSEMA (Lipoprotein n=4 Tax=Pseudomonas TaxID=286 RepID=A0A0W0MRL5_PSEMA)

HSP 1 Score: 231 bits (588), Expect = 2.220e-72
Identity = 122/253 (48.22%), Postives = 169/253 (66.80%), Query Frame = 1
Query:    1 MPRLILYFLLVLTFPILSGCNGQQSLYDDLSQGSANEVMAELISNGIPVKSRRSDSGFSVLIHQSDTARAVHILSTAGLPREPRADLGSTFEKAGIISTPFEERARYIYALAQEMESTLTQIDGVTQARVQVVLPDRIAPGEPVHPASASVFIKHNAFLTPDAIHPRIRQLVMSSIPGLSQQGGNSSRVSIVFVPTREFADTGPEMTYFGPYLIPRHAANFWKMTLVISSIVVLLLCAGIGWLLWRRRMSAAA 759
            M R ++  L + T  IL+GC     L+ ++S+  ANEV+AEL    I  +      G +V +  SD +RAV  L  AGLPR  R+ LG  F K G+ISTP EERARYIYAL+QE+ESTL+ IDGV  ARV VVLP+RIAPGEPV PASASVFIKH+  L PD I+PR+R++V SSIPG++    N++++++VFVP   + +   ++ + GP+L+P     FW+M+  I + +V L+  GI W +WRRR + A+
Sbjct:    1 MYRRLISLLFISTTLILTGCGDSVELHRNISEPEANEVIAELADKQIRAQKIPGKDGVAVRVKASDISRAVRTLDAAGLPRLARSTLGDIFRKEGVISTPLEERARYIYALSQELESTLSNIDGVIVARVHVVLPERIAPGEPVQPASASVFIKHDPRLEPDKINPRVRRMVASSIPGMASAVDNTAKLTVVFVPATAYIEQ-QKLIHLGPFLVPEQDVGFWRMS--IFAPLVALILGGIAWQVWRRRQTRAS 250          
BLAST of mRNA_E-siliculosus-1a_F_contig10128.138.1 vs. uniprot
Match: J2E828_PSEFL (Lipoprotein n=3 Tax=Pseudomonas TaxID=286 RepID=J2E828_PSEFL)

HSP 1 Score: 230 bits (586), Expect = 1.210e-71
Identity = 121/235 (51.49%), Postives = 160/235 (68.09%), Query Frame = 1
Query:   46 ILSGCNGQQSLYDDLSQGSANEVMAELISNGIPVKSRRSDSGFSVLIHQSDTARAVHILSTAGLPREPRADLGSTFEKAGIISTPFEERARYIYALAQEMESTLTQIDGVTQARVQVVLPDRIAPGEPVHPASASVFIKHNAFLTPDAIHPRIRQLVMSSIPGLSQQGGNSSRVSIVFVPTREFADTGPEMTYFGPYLIPRHAANFWKMTLVISSIVVL-LLCAGIGWL--LWRR 741
            +L+GC+ + +L+  LS+  ANEV+AEL    I    +    G +VL+  +D   AVH+L  AGLPR  R+ LG  F K G+ISTP EERARYIYAL+QE+ESTL+QIDGV  ARV VVLP+R+APGEPV PASASVFIKH   L PD+I PR+R LV S IPG++    N+S++S+VFVPT  + +   +M YFGP+L+      +W+   V +SI +L LL  G+  L  LWR+
Sbjct:   12 LLNGCDERAALHSRLSEQDANEVIAELADKSIEASKQADKEGLTVLVEPADMNSAVHVLEAAGLPRRSRSSLGEIFRKEGVISTPMEERARYIYALSQELESTLSQIDGVVLARVHVVLPERVAPGEPVQPASASVFIKHTRALDPDSITPRVRNLVASGIPGMADAAQNASKLSVVFVPTAPYQERR-KMAYFGPFLMQADDVGYWRAMTVAASITLLALLLGGVFGLYRLWRK 245          
BLAST of mRNA_E-siliculosus-1a_F_contig10128.138.1 vs. uniprot
Match: UPI001905DB92 (type III secretion inner membrane ring lipoprotein SctJ n=1 Tax=unclassified Pseudomonas TaxID=196821 RepID=UPI001905DB92)

HSP 1 Score: 229 bits (585), Expect = 1.430e-71
Identity = 114/235 (48.51%), Postives = 163/235 (69.36%), Query Frame = 1
Query:   46 ILSGCNGQQSLYDDLSQGSANEVMAELISNGIPVKSRRSDSGFSVLIHQSDTARAVHILSTAGLPREPRADLGSTFEKAGIISTPFEERARYIYALAQEMESTLTQIDGVTQARVQVVLPDRIAPGEPVHPASASVFIKHNAFLTPDAIHPRIRQLVMSSIPGLSQQGGNSSRVSIVFVPTREFADTGPEMTYFGPYLIPRHAANFWKMTLVISSIVVLLLCAGIGW---LLWRR 741
            +L+ C  + +L+  LS+ +ANEV+A L    I    +    G SVL+ ++D   AVH+L  AGLPR  R+ LG  F K G+ISTP EERARY+YAL+QE+ESTL+QIDGV  ARV VVLP+R+APGEPV PASASVFIKH + L PD+I PR+R ++ S IPG++    NSS++S+VFVPT  + +   ++ +FGP+L+      +W+  ++++S++VL L  G+G+    LWR+
Sbjct:   14 LLTACEERSALHSRLSEQAANEVIAALADENIQASKQVDKDGLSVLVARADLNSAVHVLEAAGLPRRSRSSLGDIFRKEGVISTPLEERARYLYALSQELESTLSQIDGVVLARVHVVLPERVAPGEPVQPASASVFIKHTSALDPDSITPRVRSMIASGIPGMADAPSNSSKLSVVFVPTAPYQERR-QLAHFGPFLMQADELAYWRTVILVASVLVLSLLLGLGYGIYRLWRK 247          
BLAST of mRNA_E-siliculosus-1a_F_contig10128.138.1 vs. uniprot
Match: A0A0X1T5D8_PSEAA (Lipoprotein n=2 Tax=Pseudomonas agarici TaxID=46677 RepID=A0A0X1T5D8_PSEAA)

HSP 1 Score: 228 bits (581), Expect = 3.070e-71
Identity = 123/244 (50.41%), Postives = 161/244 (65.98%), Query Frame = 1
Query:   25 LLVLTFPILSGCNGQQSLYDDLSQGSANEVMAELISNGIPVKSRRSDSGFSVLIHQSDTARAVHILSTAGLPREPRADLGSTFEKAGIISTPFEERARYIYALAQEMESTLTQIDGVTQARVQVVLPDRIAPGEPVHPASASVFIKHNAFLTPDAIHPRIRQLVMSSIPGLSQQGGNSSRVSIVFVPTREFADTGPEMTYFGPYLIPRHAANFWKMTLVISSIVVLLLCAGIGWLL---WRRRM 747
            +L+L   +L+GC+ +  L+  LS+  ANEV+A+L    I    +    G +V++   +  RAV IL  AGLPR  R  LG  F+K G+ISTP EERARYIYAL+QE+ESTL+QIDGV  ARV VVLP+RIAPGEPV PASA+VFIKH A L PD++  RI+Q+V SSIPG+SQ+  NS + +IVFVP  EF D   ++  FGP+L+      FW M L+ S +  LLL   I   L   WR+ +
Sbjct:    7 ILLLCLTLLAGCSDESKLFGALSEQDANEVIAQLADQHIEAHKQSEKLGVTVIVPSHEINRAVRILDAAGLPRRTRTSLGEIFKKEGVISTPLEERARYIYALSQELESTLSQIDGVVVARVHVVLPERIAPGEPVQPASAAVFIKHTAVLDPDSVRGRIQQMVASSIPGMSQEALNSKKFAIVFVPAVEFEDK-QKLVQFGPFLVDSRDQGFWNMALIASLVGALLLVVLIALALRADWRQAL 249          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10128.138.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7M1KEL5_9PSED1.470e-7550.40Lipoprotein n=3 Tax=Pseudomonas TaxID=286 RepID=A0... [more]
UPI0015A03CDD1.940e-7350.00type III secretion inner membrane ring lipoprotein... [more]
A0A0A7JTL7_9PSED3.510e-7351.52Lipoprotein n=2 Tax=Pseudomonas parafulva TaxID=15... [more]
A0A2P8LBR5_9PSED5.520e-7350.64Lipoprotein n=6 Tax=Pseudomonas TaxID=286 RepID=A0... [more]
A0A4Y9TIY4_PSEFL1.520e-7249.57Lipoprotein n=5 Tax=Pseudomonas TaxID=286 RepID=A0... [more]
A0A1H0GQZ1_9PSED1.900e-7248.62Lipoprotein n=3 Tax=Pseudomonadaceae TaxID=135621 ... [more]
A0A0W0MRL5_PSEMA2.220e-7248.22Lipoprotein n=4 Tax=Pseudomonas TaxID=286 RepID=A0... [more]
J2E828_PSEFL1.210e-7151.49Lipoprotein n=3 Tax=Pseudomonas TaxID=286 RepID=J2... [more]
UPI001905DB921.430e-7148.51type III secretion inner membrane ring lipoprotein... [more]
A0A0X1T5D8_PSEAA3.070e-7150.41Lipoprotein n=2 Tax=Pseudomonas agarici TaxID=4667... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig10128contigE-siliculosus-1a_F_contig10128:1921..2679 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop0
Cds size759
Model size759
Exons1
Hectar predicted targeting categorysignal peptide
BRITEko00000,ko00001,ko00002,ko02044
Best eggNOG OGNA|NA|NA
Best tax levelGammaproteobacteria
COG Functional cat.U
EggNOG OGs1N69F@1224,1RMNM@1236,COG4669@1,COG4669@2
EggNOG free text desc.Lipoprotein
KEGG ModuleM00332,M00542,M00660
KEGG Pathwayko03070,map03070
KEGG TC3.A.6.1,3.A.6.3
KEGG koko:K03222
Preferred namehrcJ
Seed eggNOG ortholog1038922.PflQ2_0350
Seed ortholog evalue3.4e-58
Seed ortholog score231.9
Taxonomic scopeBacteria
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927515.494036-CDS-E-siliculosus-1a_F_contig10128:1920..26791622927515.494036-CDS-E-siliculosus-1a_F_contig10128:1920..2679Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10128 1921..2679 +
1696318563.0713916-CDS-E-siliculosus-1a_F_contig10128:1920..26791696318563.0713916-CDS-E-siliculosus-1a_F_contig10128:1920..2679Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10128 1921..2679 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig10128.138.1prot_E-siliculosus-1a_F_contig10128.138.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig10128 1921..2679 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig10128.138.1

>prot_E-siliculosus-1a_F_contig10128.138.1 ID=prot_E-siliculosus-1a_F_contig10128.138.1|Name=mRNA_E-siliculosus-1a_F_contig10128.138.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=253bp
MPRLILYFLLVLTFPILSGCNGQQSLYDDLSQGSANEVMAELISNGIPVK
SRRSDSGFSVLIHQSDTARAVHILSTAGLPREPRADLGSTFEKAGIISTP
FEERARYIYALAQEMESTLTQIDGVTQARVQVVLPDRIAPGEPVHPASAS
VFIKHNAFLTPDAIHPRIRQLVMSSIPGLSQQGGNSSRVSIVFVPTREFA
DTGPEMTYFGPYLIPRHAANFWKMTLVISSIVVLLLCAGIGWLLWRRRMS
AAA
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mRNA from alignment at E-siliculosus-1a_F_contig10128:1921..2679+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig10128.138.1 ID=mRNA_E-siliculosus-1a_F_contig10128.138.1|Name=mRNA_E-siliculosus-1a_F_contig10128.138.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=759bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10128:1921..2679+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGCCACGCCTCATTCTTTATTTCTTATTGGTTCTTACATTTCCGATACT TTCGGGATGCAATGGTCAGCAAAGTTTATATGACGACCTATCCCAAGGTA GCGCCAATGAGGTCATGGCAGAACTTATTTCAAACGGAATTCCCGTAAAA AGCAGGAGAAGCGACTCAGGCTTTTCCGTTCTAATACATCAAAGCGATAC TGCCCGCGCCGTACATATCCTCTCAACCGCAGGGCTCCCACGGGAACCCC GCGCCGATCTTGGCAGCACTTTCGAAAAAGCAGGCATTATTTCAACACCT TTCGAAGAAAGGGCACGCTATATTTACGCGCTTGCACAAGAAATGGAGTC CACGCTTACACAAATTGACGGTGTTACTCAAGCCAGAGTGCAGGTGGTTC TACCCGACAGGATTGCTCCAGGAGAGCCTGTTCACCCAGCGTCAGCCTCC GTCTTTATTAAGCATAACGCCTTCCTGACACCGGATGCTATTCACCCAAG GATAAGACAACTCGTTATGAGCAGCATTCCCGGCCTCTCTCAGCAAGGTG GAAATAGCTCTCGCGTCTCAATCGTCTTTGTACCCACTAGAGAATTTGCT GATACCGGCCCGGAAATGACCTACTTTGGCCCCTATTTGATACCTCGCCA CGCAGCTAATTTTTGGAAAATGACCTTAGTCATATCTTCGATCGTTGTGC TACTACTATGTGCAGGCATTGGTTGGCTATTATGGCGCCGCAGGATGTCA GCAGCCGCG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10128:1921..2679+

>mRNA_E-siliculosus-1a_F_contig10128.138.1 ID=mRNA_E-siliculosus-1a_F_contig10128.138.1|Name=mRNA_E-siliculosus-1a_F_contig10128.138.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1518bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10128:1921..2679+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGCCACGCCTCATTCTTTATTTCTTATTGGTTCTTACATTTCCGATACT
TTCGGGATGCAATGGTCAGCAAAGTTTATATGACGACCTATCCCAAGGTA
GCGCCAATGAGGTCATGGCAGAACTTATTTCAAACGGAATTCCCGTAAAA
AGCAGGAGAAGCGACTCAGGCTTTTCCGTTCTAATACATCAAAGCGATAC
TGCCCGCGCCGTACATATCCTCTCAACCGCAGGGCTCCCACGGGAACCCC
GCGCCGATCTTGGCAGCACTTTCGAAAAAGCAGGCATTATTTCAACACCT
TTCGAAGAAAGGGCACGCTATATTTACGCGCTTGCACAAGAAATGGAGTC
CACGCTTACACAAATTGACGGTGTTACTCAAGCCAGAGTGCAGGTGGTTC
TACCCGACAGGATTGCTCCAGGAGAGCCTGTTCACCCAGCGTCAGCCTCC
GTCTTTATTAAGCATAACGCCTTCCTGACACCGGATGCTATTCACCCAAG
GATAAGACAACTCGTTATGAGCAGCATTCCCGGCCTCTCTCAGCAAGGTG
GAAATAGCTCTCGCGTCTCAATCGTCTTTGTACCCACTAGAGAATTTGCT
GATACCGGCCCGGAAATGACCTACTTTGGCCCCTATTTGATACCTCGCCA
CGCAGCTAATTTTTGGAAAATGACCTTAGTCATATCTTCGATCGTTGTGC
TACTACTATGTGCAGGCATTGGTTGGCTATTATGGCGCCGCAGGATGTCA
GCAGCCGCGATGCCACGCCTCATTCTTTATTTCTTATTGGTTCTTACATT
TCCGATACTTTCGGGATGCAATGGTCAGCAAAGTTTATATGACGACCTAT
CCCAAGGTAGCGCCAATGAGGTCATGGCAGAACTTATTTCAAACGGAATT
CCCGTAAAAAGCAGGAGAAGCGACTCAGGCTTTTCCGTTCTAATACATCA
AAGCGATACTGCCCGCGCCGTACATATCCTCTCAACCGCAGGGCTCCCAC
GGGAACCCCGCGCCGATCTTGGCAGCACTTTCGAAAAAGCAGGCATTATT
TCAACACCTTTCGAAGAAAGGGCACGCTATATTTACGCGCTTGCACAAGA
AATGGAGTCCACGCTTACACAAATTGACGGTGTTACTCAAGCCAGAGTGC
AGGTGGTTCTACCCGACAGGATTGCTCCAGGAGAGCCTGTTCACCCAGCG
TCAGCCTCCGTCTTTATTAAGCATAACGCCTTCCTGACACCGGATGCTAT
TCACCCAAGGATAAGACAACTCGTTATGAGCAGCATTCCCGGCCTCTCTC
AGCAAGGTGGAAATAGCTCTCGCGTCTCAATCGTCTTTGTACCCACTAGA
GAATTTGCTGATACCGGCCCGGAAATGACCTACTTTGGCCCCTATTTGAT
ACCTCGCCACGCAGCTAATTTTTGGAAAATGACCTTAGTCATATCTTCGA
TCGTTGTGCTACTACTATGTGCAGGCATTGGTTGGCTATTATGGCGCCGC
AGGATGTCAGCAGCCGCG
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