mRNA_E-siliculosus-1a_F_contig1215.1370.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1215.1370.1
Unique NamemRNA_E-siliculosus-1a_F_contig1215.1370.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1215.1370.1 vs. uniprot
Match: A0A6H5K2Y0_9PHAE (FYVE-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2Y0_9PHAE)

HSP 1 Score: 319 bits (817), Expect = 1.830e-108
Identity = 160/173 (92.49%), Postives = 163/173 (94.22%), Query Frame = 1 
Query:   10 GVPGVITLNPKMHWMPDRMCRVCYGCNSPFTMFRRRHHCRVCGQIFCHTCSSNHVDARALGINASVRMCNPCAEQLPDSRLRRLEAGPLLDREAKDTAGNPRRSSFKRRRSPLGNRAAGGVSPVGVSSGGQSKRERGTPPPYSRAPPEKTPTAAAAAAEALANAVRKSAIAAE 528
            GVPGVITLNPKMHWMPDRMCRVCYGCNSPFTMFRRRHHCRVCGQIFCHTCSSNHVDARALGINASVRMCNPCAEQLPDSR+RR+EAGPL DREAKDTAGNPRR+S KRRRSPL NRA GGVSPVG SSGGQSKRERGT   YSRAPPEK PTAAAAAAEALA AVRKSAIAAE
Sbjct:   84 GVPGVITLNPKMHWMPDRMCRVCYGCNSPFTMFRRRHHCRVCGQIFCHTCSSNHVDARALGINASVRMCNPCAEQLPDSRVRRIEAGPLPDREAKDTAGNPRRASSKRRRSPLDNRATGGVSPVGASSGGQSKRERGTLSSYSRAPPEKAPTAAAAAAEALATAVRKSAIAAE 256
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1215.1370.1 vs. uniprot
Match: D7G3Z3_ECTSI (1-phosphatidylinositol-3-phosphate 5-kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Z3_ECTSI)

HSP 1 Score: 303 bits (776), Expect = 3.560e-92
Identity = 155/177 (87.57%), Postives = 156/177 (88.14%), Query Frame = 1 
Query:    1 GVGGVPGVITLNPKMHWMPDRMCRVCYGCNSPFTMFRRRHHCRVCGQIFCHTCSSNHVDARALGINASVRMCNPCAEQLPDSRLRRLEAGPLLDREAKDTAGNPRRSSFKRRRSPLGNRAAGGVSPVGVSSGGQSKRERGTPPPYSRAPPEKTPTAAAAAAEALANAVRKSAIAAEE 531
            G GGVPGVITLNPKMHWMPDRMCRVCYGCNSPFTMFRRRHHCRVCGQIFCHTCSSNHVDARALGINASVRMCNPCAEQLPDSRLRRLEAGPL DREAKDTAGNPRRSS KRRRSPL NRAAGGVSPVGVSSGGQSKRERGTP  Y+R               ALANAVRKSAIAAEE
Sbjct:  147 GGGGVPGVITLNPKMHWMPDRMCRVCYGCNSPFTMFRRRHHCRVCGQIFCHTCSSNHVDARALGINASVRMCNPCAEQLPDSRLRRLEAGPLPDREAKDTAGNPRRSSSKRRRSPLDNRAAGGVSPVGVSSGGQSKRERGTPXXYTRXXXXXXXXXXXXXXXALANAVRKSAIAAEE 323
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1215.1370.1 vs. uniprot
Match: A0A835ZF88_9STRA (FYVE-type domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF88_9STRA)

HSP 1 Score: 106 bits (265), Expect = 3.110e-27
Identity = 41/67 (61.19%), Postives = 51/67 (76.12%), Query Frame = 1 
Query:   34 NPKMHWMPDRMCRVCYGCNSPFTMFRRRHHCRVCGQIFCHTCSSNHVDARALGINASVRMCNPCAEQ 234
            +PK++WMPD++CRVCY C +PFTMFRRRHHCRVCGQ+FC  CS   VD +  GI  S+R C  C +Q
Sbjct:    1 SPKLYWMPDKICRVCYECGAPFTMFRRRHHCRVCGQVFCQNCSGYSVDGKDFGIAGSIRTCRMCYDQ 67
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1215.1370.1 vs. uniprot
Match: A0A7S4DP41_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DP41_9EUKA)

HSP 1 Score: 103 bits (258), Expect = 3.320e-24
Identity = 41/68 (60.29%), Postives = 51/68 (75.00%), Query Frame = 1 
Query:   31 LNPKMHWMPDRMCRVCYGCNSPFTMFRRRHHCRVCGQIFCHTCSSNHVDARALGINASVRMCNPCAEQ 234
            L  K HWMPDR C+VCY C  PFT+FRRRHHCR+CGQ+FC++CSS+ VD     I  +VR+CN C +Q
Sbjct:  132 LLSKKHWMPDRTCKVCYDCEMPFTLFRRRHHCRICGQVFCNSCSSHMVDGALYNIPGNVRVCNYCFDQ 199
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1215.1370.1 vs. uniprot
Match: A0A7S2GIE7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GIE7_9STRA)

HSP 1 Score: 101 bits (251), Expect = 9.530e-24
Identity = 49/122 (40.16%), Postives = 69/122 (56.56%), Query Frame = 1 
Query:   46 HWMPDRMCRVCYGCNSPFTMFRRRHHCRVCGQIFCHTCSSNHVDARALGINASVRMCNPCAEQLPDSRL---------RRLEAGPLLDREAKDTAGNPRRSSFKRRRSPLGNRAAGGVSPVG 384
            +WMPDR+C+VCY C  PF M RRRHHCR+CGQ+FCH+CSS  V+ +A GI  +VR C  C +Q+  + +         R++  G ++   A    G P+          LG   + GV P+G
Sbjct:   31 YWMPDRLCKVCYDCELPFNMLRRRHHCRMCGQVFCHSCSSYFVEGKAAGIPGTVRACKMCHDQVNSANVQQVVSHRMQRQIRRGEIMTDGAVLREGMPK----------LGRSRSAGVLPLG 142
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1215.1370.1 vs. uniprot
Match: A0A482SVF7_9ARCH (FYVE-type domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SVF7_9ARCH)

HSP 1 Score: 103 bits (257), Expect = 1.460e-23
Identity = 39/74 (52.70%), Postives = 52/74 (70.27%), Query Frame = 1 
Query:   40 KMHWMPDRMCRVCYGCNSPFTMFRRRHHCRVCGQIFCHTCSSNHVDARALGINASVRMCNPCAEQLPDSRLRRL 261
            K  WMPD+ C+VCYGC   FTMFRRRHHCR+CGQ+FC+ CS+N ++   L +  S+R+C PC +Q  D   + L
Sbjct:   28 KEFWMPDKYCKVCYGCEESFTMFRRRHHCRLCGQVFCNNCSNNFIEGSVLNMTGSIRVCRPCYDQSMDKTEKEL 101
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1215.1370.1 vs. uniprot
Match: A0A7S2R4A4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R4A4_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 4.140e-21
Identity = 38/56 (67.86%), Postives = 42/56 (75.00%), Query Frame = 1 
Query:   16 PGVITLNPKMHWMPDRMCRVCYGCNSPFTMFRRRHHCRVCGQIFCHTCSSNHVDAR 183
            P V  LN  M WMPDR+C+VCY C  PF MF RRHHCRVCGQIFCH+CSS  VD +
Sbjct:  107 PAVSLLNKDMFWMPDRLCKVCYDCERPFNMFVRRHHCRVCGQIFCHSCSSYSVDGK 162
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1215.1370.1 vs. uniprot
Match: A0A1E7FV97_9STRA (FYVE/PHD zinc finger protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FV97_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 2.310e-20
Identity = 35/63 (55.56%), Postives = 47/63 (74.60%), Query Frame = 1 
Query:   49 WMPDRMCRVCYGCNSPFTMFRRRHHCRVCGQIFCHTCSSNHVDARALGINASVRMCNPCAEQL 237
            WMPDR+C+ CY C++PFT+FRRRHHCR+CGQ+FC+TCS   V A +   N  +R C  C +Q+
Sbjct:    1 WMPDRLCKTCYSCDAPFTVFRRRHHCRICGQVFCNTCSGYFVPASSN--NIILRTCKMCFDQV 61
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1215.1370.1 vs. uniprot
Match: M4BZJ9_HYAAE (FYVE-type domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BZJ9_HYAAE)

HSP 1 Score: 95.9 bits (237), Expect = 9.570e-20
Identity = 41/92 (44.57%), Postives = 63/92 (68.48%), Query Frame = 1 
Query:   16 PGVITLNPKMHWMPDRMCRVCYGCNSPFTMFRRRHHCRVCGQIFCHTCSSNHVDARALGINASVRMCNPCAEQLPDSRLRRL---EAGPLLD 282
            P + T++   +WMPDR+C+VCY C++ F++FRRRHHCR+CGQIFCH CS++ +D  + G   ++R+C  C  +L D+  R+    E G + D
Sbjct:   61 PSLTTVS-NQYWMPDRLCKVCYDCSAAFSLFRRRHHCRLCGQIFCHECSNSFIDGTSHGFPGAIRVCKFCV-RLNDAASRKAKLRENGHIAD 150
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1215.1370.1 vs. uniprot
Match: A0A7S3NNB9_9STRA (1-phosphatidylinositol-3-phosphate 5-kinase n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NNB9_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 9.930e-20
Identity = 40/81 (49.38%), Postives = 53/81 (65.43%), Query Frame = 1 
Query:   13 VPGVITLNPKMHWMPDRMCRVCYGCNSPFTMFRRRHHCRVCGQIFCHTCSSNHVDARALGINASVRMCNPCAEQLPDSRLR 255
            +P  I    + +WMPDR+CR+CY C  PF +FRR+HHCR CGQIFCH+CSS  VD R   +   VR C  C  Q+ +++ R
Sbjct:  162 MPSRIVPFSREYWMPDRLCRMCYECELPFNVFRRKHHCRFCGQIFCHSCSSYFVDGRLFLLIGMVRACRLCHNQIVNNQER 242
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1215.1370.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K2Y0_9PHAE1.830e-10892.49FYVE-type domain-containing protein (Fragment) n=1... [more]
D7G3Z3_ECTSI3.560e-9287.571-phosphatidylinositol-3-phosphate 5-kinase n=1 Ta... [more]
A0A835ZF88_9STRA3.110e-2761.19FYVE-type domain-containing protein (Fragment) n=1... [more]
A0A7S4DP41_9EUKA3.320e-2460.29Hypothetical protein (Fragment) n=1 Tax=Lotharella... [more]
A0A7S2GIE7_9STRA9.530e-2440.16Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A482SVF7_9ARCH1.460e-2352.70FYVE-type domain-containing protein n=1 Tax=archae... [more]
A0A7S2R4A4_9STRA4.140e-2167.86Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A1E7FV97_9STRA2.310e-2055.56FYVE/PHD zinc finger protein (Fragment) n=1 Tax=Fr... [more]
M4BZJ9_HYAAE9.570e-2044.57FYVE-type domain-containing protein n=1 Tax=Hyalop... [more]
A0A7S3NNB9_9STRA9.930e-2049.381-phosphatidylinositol-3-phosphate 5-kinase n=1 Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1215contigE-siliculosus-1a_F_contig1215:32412..34551 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop0
Cds size531
Model size534
Exons4
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko01000,ko04131
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.T
EC2.7.1.150
EggNOG OGsCOG5253@1,KOG0230@2759
EggNOG free text desc.Translation initiation factor IF-2, N-terminal region
KEGG Pathwayko00562,ko04070,ko04145,ko04810,map00562,map04070,map04145,map04810
KEGG ReactionR05802,R10951
KEGG koko:K00921
KEGG rclassRC00002,RC00078
Seed eggNOG ortholog2880.D7G3Z3
Seed ortholog evalue1.7e-80
Seed ortholog score305.4
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1215.1370.1prot_E-siliculosus-1a_F_contig1215.1370.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1215 32412..34550 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927733.866812-CDS-E-siliculosus-1a_F_contig1215:32411..324681622927733.866812-CDS-E-siliculosus-1a_F_contig1215:32411..32468Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1215 32412..32468 +
1696318659.365148-CDS-E-siliculosus-1a_F_contig1215:32411..324681696318659.365148-CDS-E-siliculosus-1a_F_contig1215:32411..32468Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1215 32412..32468 +
1622927733.8801916-CDS-E-siliculosus-1a_F_contig1215:32921..330631622927733.8801916-CDS-E-siliculosus-1a_F_contig1215:32921..33063Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1215 32922..33063 +
1696318659.374805-CDS-E-siliculosus-1a_F_contig1215:32921..330631696318659.374805-CDS-E-siliculosus-1a_F_contig1215:32921..33063Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1215 32922..33063 +
1622927733.896346-CDS-E-siliculosus-1a_F_contig1215:33725..338201622927733.896346-CDS-E-siliculosus-1a_F_contig1215:33725..33820Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1215 33726..33820 +
1696318659.382373-CDS-E-siliculosus-1a_F_contig1215:33725..338201696318659.382373-CDS-E-siliculosus-1a_F_contig1215:33725..33820Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1215 33726..33820 +
1622927733.9170673-CDS-E-siliculosus-1a_F_contig1215:34313..345501622927733.9170673-CDS-E-siliculosus-1a_F_contig1215:34313..34550Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1215 34314..34550 +
1696318659.3923752-CDS-E-siliculosus-1a_F_contig1215:34313..345501696318659.3923752-CDS-E-siliculosus-1a_F_contig1215:34313..34550Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1215 34314..34550 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1215.1370.1

>prot_E-siliculosus-1a_F_contig1215.1370.1 ID=prot_E-siliculosus-1a_F_contig1215.1370.1|Name=mRNA_E-siliculosus-1a_F_contig1215.1370.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=177bp
GVGGVPGVITLNPKMHWMPDRMCRVCYGCNSPFTMFRRRHHCRVCGQIFC
HTCSSNHVDARALGINASVRMCNPCAEQLPDSRLRRLEAGPLLDREAKDT
AGNPRRSSFKRRRSPLGNRAAGGVSPVGVSSGGQSKRERGTPPPYSRAPP
EKTPTAAAAAAEALANAVRKSAIAAEE
back to top

mRNA from alignment at E-siliculosus-1a_F_contig1215:32412..34551+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1215.1370.1 ID=mRNA_E-siliculosus-1a_F_contig1215.1370.1|Name=mRNA_E-siliculosus-1a_F_contig1215.1370.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=2140bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1215:32412..34551+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GGGGTCGGCGGTGTGCCTGGAGTGATCACGCTCAACCCTAAGATGCACTG
GATGCCCGTGAGTTTTGGTCGATGCTGGGGGGGTCGGTGTGGGACATACG
TCCAGGCTTCCCGAAAACAGGCTTTTTTGGTCGTGCTCTTGATATATATG
CTGCAGGATGATAATCCCAGCGCGATGGCCATCGTTTTTAGCCGCAGATG
GACGACCGCGTACGTACGTTTACTATCCTATCTACATATTTTGCAGAGGT
ATGCGGCTGGGCATGTCCGCTGCAAGACTGACTGGCTTGTTTTCATTTTC
ATTGGTCAGCCCGTTACCGCGGCCGATGCTTTTTGACACAACACACACAG
AGAGAGCAGGGAGGGGGGGGACGCCCTAAGCTCTTTCTTGGAGTTCTCAT
CGGATGAAGCGCCGCGTGTCGTCCAAGGTGTCACAGTCACAATTCGTGGG
CGAAAAAAGAAGCGGCTTGGTACTAACTAATAGCACGCTGCGGTAATCCA
CGCATTGCAGGACAGGATGTGCAGGGTCTGCTACGGGTGTAACAGCCCCT
TCACGATGTTCAGGCGCCGCCACCATTGCCGAGTCTGCGGACAGATCTTC
TGCCACACGTGCAGCTCTAACCACGTGGACGCCCGGGCACTCGGAATAAA
CGGTGAGGCCCGCTACAATCGAACGTCGGTTTAGTTTTTTTTATTCCGTC
GGCTTTTGTTTTTCCTAGAATTAGAAAGGAGCAAGCCCAGTTCAGGCCTG
CTTCAATCGAACGCCCGTTGTTTTCCCGACAACGTGTTGAAAGGGGGTAA
GCGCTGAGTTTTGCTGCAAAGAAAAAGTGAGAAACTACTTTGGAAGAAAA
CAACAGCCCGAACTGGGAACTGCTGTAGCATCTTCAGGAAAAAATCAAGC
AACAAATGTCGATTGGGTGATTTTAGATGGCTCGAGGACCTGTGAGTCTT
TTGAAACCACGAACCCTGTGGAACACACAAGGATCATACGGTAAGCCGAT
CCGTCTACCACTTGAAAGTTGAGAGCTTGCTTCCGTGAACGTAACCGTTT
GTGGCACTAATGAACACGTGCCTCGTAATCCCACCTCTTCTGGACGTCGG
GGGCTCTGAACCCACTCGGCATGTTTGCAAGCACCAGACGGGCGGGACCA
CAGAAGAAAAACGACACTCGTTTTTTTTTTTTCTGTTGTTGTCCACCTTC
GAACTGCAGTAGTTTAATGGCATGAAGGTTGATTTCTCCACCCCCCTCTT
CGCGATTCCACGGTGCCCCTCCCCGCCGACACACCCAATTTCTTGCGATG
GGTTGGCGTGGTAGCATCCGTCCGCATGTGCAACCCATGTGCCGAGCAGC
TGCCGGACTCGAGGCTGCGGAGACTTGAAGCTGGACCTTTACTAGACCGA
GAAGCTAAGGTATTTGCTCAAAGTTTGATGCTGCAACAGTTTCGGTGCCG
TCGTGTTGTTGTTGTTGTTGTTGTTGTTGTTGGTGGTGGTGGTGGTGGTG
GTGTTCCTCGTTGTTGTTGTCATCGTCGTCGATTTGGTCGACAGACCTAT
GTGATCATCGCTTGTACAAGTAGGGTTCGGTTGGGGCGATGAGGTTGGGT
AGGTATGCGTATATTTTTTCTTTCGGTGCTCCCCCTGGCGGCACTTTTGA
CCGGTGCCGCAGGAAACCTACTTCTGTGTGGCACGGCGTCCACCTCCGGA
TGAACGTGCCGCACCGCGGCCAAGATGTGGTCTCGCATTCCTCTCACCTC
CAACCTCAGTTTTTGGTGACATAACGCGCTGGGGGGGTAGTAGAGACCAC
CGAACCACGCACGACCGAAAATAAATTGCATGTCGTACCCCCACCACGAC
GAAGAATAAATGAAATGTCGTACCCCCCGTCGTGGTGCTTGAAACGGTGC
AGGACACGGCGGGCAACCCGCGGCGGTCATCATTCAAGCGCCGAAGAAGC
CCACTCGGCAACAGGGCCGCAGGCGGCGTGTCTCCTGTGGGCGTCTCCAG
CGGTGGGCAGTCGAAGCGGGAGCGCGGCACCCCGCCTCCCTACTCCCGAG
CTCCCCCGGAGAAGACTCCCACCGCCGCCGCGGCCGCCGCAGAAGCTCTC
GCCAACGCCGTGAGAAAGTCCGCGATAGCGGCGGAGGAGG
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1215:32412..34551+

>mRNA_E-siliculosus-1a_F_contig1215.1370.1 ID=mRNA_E-siliculosus-1a_F_contig1215.1370.1|Name=mRNA_E-siliculosus-1a_F_contig1215.1370.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1062bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1215:32412..34551+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GGGGTCGGCGGTGTGCCTGGAGTGATCACGCTCAACCCTAAGATGCACTG
GATGCCCGGGGTCGGCGGTGTGCCTGGAGTGATCACGCTCAACCCTAAGA
TGCACTGGATGCCCGACAGGATGTGCAGGGTCTGCTACGGGTGTAACAGC
CCCTTCACGATGTTCAGGCGCCGCCACCATTGCCGAGTCTGCGGACAGAT
CTTCTGCCACACGTGCAGCTCTAACCACGTGGACGCCCGGGCACTCGGAA
TAAACGGACAGGATGTGCAGGGTCTGCTACGGGTGTAACAGCCCCTTCAC
GATGTTCAGGCGCCGCCACCATTGCCGAGTCTGCGGACAGATCTTCTGCC
ACACGTGCAGCTCTAACCACGTGGACGCCCGGGCACTCGGAATAAACGCA
TCCGTCCGCATGTGCAACCCATGTGCCGAGCAGCTGCCGGACTCGAGGCT
GCGGAGACTTGAAGCTGGACCTTTACTAGACCGAGAAGCTAAGCATCCGT
CCGCATGTGCAACCCATGTGCCGAGCAGCTGCCGGACTCGAGGCTGCGGA
GACTTGAAGCTGGACCTTTACTAGACCGAGAAGCTAAGGACACGGCGGGC
AACCCGCGGCGGTCATCATTCAAGCGCCGAAGAAGCCCACTCGGCAACAG
GGCCGCAGGCGGCGTGTCTCCTGTGGGCGTCTCCAGCGGTGGGCAGTCGA
AGCGGGAGCGCGGCACCCCGCCTCCCTACTCCCGAGCTCCCCCGGAGAAG
ACTCCCACCGCCGCCGCGGCCGCCGCAGAAGCTCTCGCCAACGCCGTGAG
AAAGTCCGCGATAGCGGCGGAGGAGGACACGGCGGGCAACCCGCGGCGGT
CATCATTCAAGCGCCGAAGAAGCCCACTCGGCAACAGGGCCGCAGGCGGC
GTGTCTCCTGTGGGCGTCTCCAGCGGTGGGCAGTCGAAGCGGGAGCGCGG
CACCCCGCCTCCCTACTCCCGAGCTCCCCCGGAGAAGACTCCCACCGCCG
CCGCGGCCGCCGCAGAAGCTCTCGCCAACGCCGTGAGAAAGTCCGCGATA
GCGGCGGAGGAG
back to top