mRNA_E-siliculosus-1a_F_contig11383.912.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig11383.912.1
Unique NamemRNA_E-siliculosus-1a_F_contig11383.912.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig11383.912.1 vs. uniprot
Match: A0A3B0C7M3_9FLAO (Sugar porter family MFS transporter n=2 Tax=Flavobacteriaceae TaxID=49546 RepID=A0A3B0C7M3_9FLAO)

HSP 1 Score: 648 bits (1671), Expect = 5.540e-232
Identity = 318/376 (84.57%), Postives = 350/376 (93.09%), Query Frame = 1
Query:    1 MNSKILRIALTASLSGFLFGFDTVVISGANLPIKELWNTSPWFHGTFIMSMALWGTVLGSLLGGIPCDKFGRKKTLFWIGILYAASALGSALANDPYVFSFFRFIGGLGVGASSVAAPIYISEMSSSTNRGKLGGLYQFNLVLGILIAFISNYLLQGFGGENDWRWMLGVEAIPAILYTIMVLQIPNSPRWLAINRQNQQGALDTLNLLYAASEAQKKLSEIKQSLSLSTIKENLFSGRYKVPLMLAFLLAFFNQLSGINFVLYYAPEILERAGLASQESLFSSIAIGIVNLVFTFIGIWLIDNLGRKQLMKIGSIGYIISLAMVGWWFYTGASSSLLLTFVLIFIASHAVGQGAVIWVFISEIFPQKVSASGQSW 1128
            MNSK+ RI+LTA+LSGFLFGFDTVVISGANLPIKELWNTSPWFHGTFIMSMALWGTV+GSL GGIPCD+FGRKKTLFWIGILYAASALGSA+A DPY FSFFRFIGGLGVGASSVAAPIYISE+SS  NRGKLG LYQFNLVLGIL+AFISNYLLQGFGG NDWRWMLGVEAIPAILYTIMV++IPNSPRWLAI +Q+ +GAL TL LL++ ++A  KL EIK+S+S++ I E LFS RYK PL+LAFL+AFFNQLSGINFVLYYAPEILERAGLA+QESLFSSI+IGIVNL+FTF+G+WLID LGRKQLMKIGS+GYI+SLAMVGW FY+GASS+LLLTFVLIFIASHAVGQGAVIWVFISEIFP KV A GQSW
Sbjct:    1 MNSKLFRISLTAALSGFLFGFDTVVISGANLPIKELWNTSPWFHGTFIMSMALWGTVIGSLFGGIPCDRFGRKKTLFWIGILYAASALGSAIAPDPYTFSFFRFIGGLGVGASSVAAPIYISEISSPENRGKLGALYQFNLVLGILVAFISNYLLQGFGGSNDWRWMLGVEAIPAILYTIMVIKIPNSPRWLAITKQDDEGALKTLKLLFSENQASAKLQEIKESISVTRIGEKLFSKRYKTPLILAFLIAFFNQLSGINFVLYYAPEILERAGLAAQESLFSSISIGIVNLIFTFVGVWLIDRLGRKQLMKIGSVGYIVSLAMVGWCFYSGASSTLLLTFVLIFIASHAVGQGAVIWVFISEIFPNKVRAFGQSW 376          
BLAST of mRNA_E-siliculosus-1a_F_contig11383.912.1 vs. uniprot
Match: A4AMQ8_MARSH (Xylose transporter n=2 Tax=unclassified Maribacter TaxID=2615042 RepID=A4AMQ8_MARSH)

HSP 1 Score: 632 bits (1629), Expect = 1.270e-225
Identity = 309/376 (82.18%), Postives = 338/376 (89.89%), Query Frame = 1
Query:    1 MNSKILRIALTASLSGFLFGFDTVVISGANLPIKELWNTSPWFHGTFIMSMALWGTVLGSLLGGIPCDKFGRKKTLFWIGILYAASALGSALANDPYVFSFFRFIGGLGVGASSVAAPIYISEMSSSTNRGKLGGLYQFNLVLGILIAFISNYLLQGFGGENDWRWMLGVEAIPAILYTIMVLQIPNSPRWLAINRQNQQGALDTLNLLYAASEAQKKLSEIKQSLSLSTIKENLFSGRYKVPLMLAFLLAFFNQLSGINFVLYYAPEILERAGLASQESLFSSIAIGIVNLVFTFIGIWLIDNLGRKQLMKIGSIGYIISLAMVGWWFYTGASSSLLLTFVLIFIASHAVGQGAVIWVFISEIFPQKVSASGQSW 1128
            MNSK+ RI+LTA+LSGFLFGFDTVVISGANLPIKELW+TSPWFHGTFIMSMALWGTV+GSL GGIPCD+FGRKKTLFWIGILYA SALGS LA DPY+FSFFRFIGGLGVGASSVAAPIYISE+SS  NRGKLG LYQFNLVLGILIAFISNYLLQG GG+NDWRWMLGVEAIPAILYTIMV+ IPNSPRWL +N+ + +GAL+TL L+Y   EA  KL +IK        KE+LFSG YK PL+LAFL+AFFNQLSGINFVLYYAPEILERAGLA+QESLFSSI+IGIVNL+FTF+G+WLID LGRKQLMKIGSIGYIISL MVGW FYTGASS LLLTF+ +FIASHA+GQGAVIWVFISEIFP K+ A GQSW
Sbjct:    1 MNSKLFRISLTAALSGFLFGFDTVVISGANLPIKELWDTSPWFHGTFIMSMALWGTVIGSLFGGIPCDRFGRKKTLFWIGILYAVSALGSGLATDPYMFSFFRFIGGLGVGASSVAAPIYISEISSPENRGKLGALYQFNLVLGILIAFISNYLLQGIGGDNDWRWMLGVEAIPAILYTIMVISIPNSPRWLVLNKGDDEGALNTLKLIYTDEEAHNKLDDIKAHNPAGQAKESLFSGNYKTPLILAFLIAFFNQLSGINFVLYYAPEILERAGLAAQESLFSSISIGIVNLIFTFVGVWLIDRLGRKQLMKIGSIGYIISLGMVGWCFYTGASSVLLLTFICVFIASHAIGQGAVIWVFISEIFPNKIRAFGQSW 376          
BLAST of mRNA_E-siliculosus-1a_F_contig11383.912.1 vs. uniprot
Match: A0A846QPN6_9FLAO (Sugar porter (SP) family MFS transporter n=1 Tax=Saonia flava TaxID=523696 RepID=A0A846QPN6_9FLAO)

HSP 1 Score: 629 bits (1621), Expect = 1.880e-224
Identity = 304/376 (80.85%), Postives = 341/376 (90.69%), Query Frame = 1
Query:    1 MNSKILRIALTASLSGFLFGFDTVVISGANLPIKELWNTSPWFHGTFIMSMALWGTVLGSLLGGIPCDKFGRKKTLFWIGILYAASALGSALANDPYVFSFFRFIGGLGVGASSVAAPIYISEMSSSTNRGKLGGLYQFNLVLGILIAFISNYLLQGFGGENDWRWMLGVEAIPAILYTIMVLQIPNSPRWLAINRQNQQGALDTLNLLYAASEAQKKLSEIKQSLSLSTIKENLFSGRYKVPLMLAFLLAFFNQLSGINFVLYYAPEILERAGLASQESLFSSIAIGIVNLVFTFIGIWLIDNLGRKQLMKIGSIGYIISLAMVGWWFYTGASSSLLLTFVLIFIASHAVGQGAVIWVFISEIFPQKVSASGQSW 1128
            MNSKI RI+LTA+LSGFLFGFDTVVISGANLPIKELWNTSPWFHGTFIMSMALWGTV+GSL GG+PC++FGRKKTLFWIGILYA SA+GS LA DPY+FSFFRFIGGLGVGASSVAAPIYISE+S++ NRGKLG LYQF LVLGILIAFISNYLL G GGENDWRWMLG+EAIPAILYT++V++IPNSPRWLAI +Q+ +GAL+TL  LY   +A  KL EIK  +S   +KE+LFSG YK PL+LAFL+AFFNQLSGINF+LYYAPEILERAGLA+QESLFSSIAIG++NL+FTF+G+WLID LGRKQLMKIGS GYIISL MVGW FY+GASS+LLL F+L+FIASHAVGQGAVIWVFISEIFP KV A GQSW
Sbjct:    1 MNSKIFRISLTAALSGFLFGFDTVVISGANLPIKELWNTSPWFHGTFIMSMALWGTVIGSLFGGVPCERFGRKKTLFWIGILYALSAIGSGLATDPYMFSFFRFIGGLGVGASSVAAPIYISEISTAKNRGKLGALYQFMLVLGILIAFISNYLLIGVGGENDWRWMLGIEAIPAILYTVLVVKIPNSPRWLAITKQDDRGALETLKQLYTEEDALNKLKEIKSDISTKKVKESLFSGNYKTPLILAFLIAFFNQLSGINFILYYAPEILERAGLATQESLFSSIAIGLINLIFTFVGVWLIDRLGRKQLMKIGSFGYIISLGMVGWCFYSGASSTLLLIFILVFIASHAVGQGAVIWVFISEIFPNKVRAFGQSW 376          
BLAST of mRNA_E-siliculosus-1a_F_contig11383.912.1 vs. uniprot
Match: UPI00126A5BB7 (sugar porter family MFS transporter n=1 Tax=Pelagihabitans pacificus TaxID=2696054 RepID=UPI00126A5BB7)

HSP 1 Score: 628 bits (1619), Expect = 3.790e-224
Identity = 313/376 (83.24%), Postives = 342/376 (90.96%), Query Frame = 1
Query:    1 MNSKILRIALTASLSGFLFGFDTVVISGANLPIKELWNTSPWFHGTFIMSMALWGTVLGSLLGGIPCDKFGRKKTLFWIGILYAASALGSALANDPYVFSFFRFIGGLGVGASSVAAPIYISEMSSSTNRGKLGGLYQFNLVLGILIAFISNYLLQGFGGENDWRWMLGVEAIPAILYTIMVLQIPNSPRWLAINRQNQQGALDTLNLLYAASEAQKKLSEIKQSLSLSTIKENLFSGRYKVPLMLAFLLAFFNQLSGINFVLYYAPEILERAGLASQESLFSSIAIGIVNLVFTFIGIWLIDNLGRKQLMKIGSIGYIISLAMVGWWFYTGASSSLLLTFVLIFIASHAVGQGAVIWVFISEIFPQKVSASGQSW 1128
            MNSK+ RI+LTA+LSGFLFGFDTVVISGANLPIKELW+TSPWFHGTFIMSMALWGTV+GSLLGGIPCD+FGRKKTLFWIG+LYA SALGS LA DPY+FSFFRFIGGLGVGASSVAAPIYISE+SS  NRGKLG LYQFNLVLGILIAFISNYLL+G GGENDWR+MLG+EAIPAI+YTIMV+ IPNSPRWLAI +Q++ GAL TL  L+   EAQ+KL EI++    +  KE LFSG+Y VPLMLAFLLAFFNQLSGINFVLYYAPEILERAGLA+QESLFSSI+IGIVNL+FTF+G+ LID LGRKQLMKIGSIGYI+SLAMVGW FYT ASS LLLTFVLIFIASHAVGQGAVIWVFISEIFP KV A GQSW
Sbjct:    1 MNSKLFRISLTAALSGFLFGFDTVVISGANLPIKELWDTSPWFHGTFIMSMALWGTVIGSLLGGIPCDRFGRKKTLFWIGVLYAISALGSGLATDPYMFSFFRFIGGLGVGASSVAAPIYISEISSPENRGKLGALYQFNLVLGILIAFISNYLLKGVGGENDWRFMLGIEAIPAIIYTIMVISIPNSPRWLAITKQDEAGALKTLRFLFTEQEAQEKLKEIEEHNPETVEKERLFSGKYSVPLMLAFLLAFFNQLSGINFVLYYAPEILERAGLAAQESLFSSISIGIVNLIFTFVGVRLIDKLGRKQLMKIGSIGYILSLAMVGWCFYTSASSMLLLTFVLIFIASHAVGQGAVIWVFISEIFPNKVRAYGQSW 376          
BLAST of mRNA_E-siliculosus-1a_F_contig11383.912.1 vs. uniprot
Match: A0A2N0FTA6_9FLAO (Sugar porter (SP) family MFS transporter n=3 Tax=Flavobacteriaceae TaxID=49546 RepID=A0A2N0FTA6_9FLAO)

HSP 1 Score: 623 bits (1607), Expect = 2.450e-222
Identity = 308/376 (81.91%), Postives = 339/376 (90.16%), Query Frame = 1
Query:    1 MNSKILRIALTASLSGFLFGFDTVVISGANLPIKELWNTSPWFHGTFIMSMALWGTVLGSLLGGIPCDKFGRKKTLFWIGILYAASALGSALANDPYVFSFFRFIGGLGVGASSVAAPIYISEMSSSTNRGKLGGLYQFNLVLGILIAFISNYLLQGFGGENDWRWMLGVEAIPAILYTIMVLQIPNSPRWLAINRQNQQGALDTLNLLYAASEAQKKLSEIKQSLSLSTIKENLFSGRYKVPLMLAFLLAFFNQLSGINFVLYYAPEILERAGLASQESLFSSIAIGIVNLVFTFIGIWLIDNLGRKQLMKIGSIGYIISLAMVGWWFYTGASSSLLLTFVLIFIASHAVGQGAVIWVFISEIFPQKVSASGQSW 1128
            MNSK+ +I+LTA+LSGFLFGFDTVVISGANLPIKELWNTSPWFHGTFIMSMALWGTV+GSL GGIPCDKFGRKKTLFWIGILYAASALGSA+A DPY+FSFFRFIGGLGVGASSVAAPIYISE+SS  NRGKLG LYQFNLVLGILIAFISN+LL+GF G NDWRWMLGVEAIPA+ YT+MV++IPNSPRWLA+ + +  GAL+TL LL    EA+ KL EIK     +   E LFSGRYK PL+LAFL+AFFNQLSGINFVLYYAPEILERAGLA+QESLFSSI+IGIVNL+FTF+G+WLID LGRKQLMKIGSIGYIISL+MVGW FY+G  S+LLLTF+LIFIASHAVGQGAVIWVFISEIFP KV A GQSW
Sbjct:    1 MNSKLFKISLTAALSGFLFGFDTVVISGANLPIKELWNTSPWFHGTFIMSMALWGTVIGSLFGGIPCDKFGRKKTLFWIGILYAASALGSAVAPDPYLFSFFRFIGGLGVGASSVAAPIYISEISSPNNRGKLGALYQFNLVLGILIAFISNFLLKGFDGANDWRWMLGVEAIPALAYTLMVVKIPNSPRWLALKKNDFDGALNTLRLLLTEEEAKLKLEEIKTQNPTTEKPEGLFSGRYKTPLILAFLIAFFNQLSGINFVLYYAPEILERAGLAAQESLFSSISIGIVNLIFTFVGVWLIDRLGRKQLMKIGSIGYIISLSMVGWCFYSGVDSALLLTFILIFIASHAVGQGAVIWVFISEIFPNKVRAFGQSW 376          
BLAST of mRNA_E-siliculosus-1a_F_contig11383.912.1 vs. uniprot
Match: A0A5B7SSV5_9FLAO (Sugar porter family MFS transporter n=1 Tax=Aggregatimonas sangjinii TaxID=2583587 RepID=A0A5B7SSV5_9FLAO)

HSP 1 Score: 617 bits (1592), Expect = 4.530e-220
Identity = 307/376 (81.65%), Postives = 341/376 (90.69%), Query Frame = 1
Query:    1 MNSKILRIALTASLSGFLFGFDTVVISGANLPIKELWNTSPWFHGTFIMSMALWGTVLGSLLGGIPCDKFGRKKTLFWIGILYAASALGSALANDPYVFSFFRFIGGLGVGASSVAAPIYISEMSSSTNRGKLGGLYQFNLVLGILIAFISNYLLQGFGGENDWRWMLGVEAIPAILYTIMVLQIPNSPRWLAINRQNQQGALDTLNLLYAASEAQKKLSEIKQSLSLSTIKENLFSGRYKVPLMLAFLLAFFNQLSGINFVLYYAPEILERAGLASQESLFSSIAIGIVNLVFTFIGIWLIDNLGRKQLMKIGSIGYIISLAMVGWWFYTGASSSLLLTFVLIFIASHAVGQGAVIWVFISEIFPQKVSASGQSW 1128
            MNSK+ RI++TA+LSGFLFGFDTVVISGANLPI+ELW+TSP FHG FIMSMALWGTV+GSLLGGIPCDK GRKKTLFWIG+LYAASALGSALA DPY+FSFFRFIGGLGVGASSVAAPIYISE+S+  NRGKLGGLYQF LVLGILIAFISNYLLQG GGENDWRWMLGVEAIPAI+YT+MVL IPNSPRWLAI +++  GAL TL +L +  EA++KL EIK    +S +KE LFSG+YK PL+LAFLLAFFNQLSGINFVLYYAPEILERAGLA+QESLFSSI+IGIVNL+FTF+GI L+D  GRKQLMKIGS+GYIISLA VGW FY+GASS +LLTFVL+FIASHA+GQGAVIWVFISEIFP KV A GQSW
Sbjct:    1 MNSKLFRISMTAALSGFLFGFDTVVISGANLPIRELWDTSPLFHGVFIMSMALWGTVIGSLLGGIPCDKLGRKKTLFWIGVLYAASALGSALAADPYLFSFFRFIGGLGVGASSVAAPIYISEISTKENRGKLGGLYQFMLVLGILIAFISNYLLQGVGGENDWRWMLGVEAIPAIIYTLMVLSIPNSPRWLAITKKDDAGALKTLAMLTSPDEAKEKLQEIKNLNPVSIVKEKLFSGKYKTPLLLAFLLAFFNQLSGINFVLYYAPEILERAGLAAQESLFSSISIGIVNLIFTFVGIRLLDKWGRKQLMKIGSLGYIISLATVGWCFYSGASSMVLLTFVLVFIASHAIGQGAVIWVFISEIFPNKVRAYGQSW 376          
BLAST of mRNA_E-siliculosus-1a_F_contig11383.912.1 vs. uniprot
Match: A0A0S1SED5_9FLAO (MFS transporter n=1 Tax=Sediminicola sp. YIK13 TaxID=1453352 RepID=A0A0S1SED5_9FLAO)

HSP 1 Score: 597 bits (1540), Expect = 4.280e-212
Identity = 291/376 (77.39%), Postives = 330/376 (87.77%), Query Frame = 1
Query:    1 MNSKILRIALTASLSGFLFGFDTVVISGANLPIKELWNTSPWFHGTFIMSMALWGTVLGSLLGGIPCDKFGRKKTLFWIGILYAASALGSALANDPYVFSFFRFIGGLGVGASSVAAPIYISEMSSSTNRGKLGGLYQFNLVLGILIAFISNYLLQGFGGENDWRWMLGVEAIPAILYTIMVLQIPNSPRWLAINRQNQQGALDTLNLLYAASEAQKKLSEIKQSLSLSTIKENLFSGRYKVPLMLAFLLAFFNQLSGINFVLYYAPEILERAGLASQESLFSSIAIGIVNLVFTFIGIWLIDNLGRKQLMKIGSIGYIISLAMVGWWFYTGASSSLLLTFVLIFIASHAVGQGAVIWVFISEIFPQKVSASGQSW 1128
            MN +ILRI+LTA+L+GFLFGFDTVVISGANLPIKELW TSPWFHGTFIMSMALWGTVLGSL GGIPCD+ GRKKTLFWIG+LY  SALGSA+A+DPY+FSFFR IGGLGVGASSVAAPIYISE+S++ NRGKLG LYQFN+V GI IAFISNYLL+GF G NDWRWMLGVEAIPA++Y IMVLQ+PNSPRWL +NR+++ GAL  L  +   ++A  KL EIK S+ + T K  LF G+YK PL+LAFL+AFFNQLSGINFVLYYAPEILERAGL  +ESLF+SI+IGI+NL+FT IGI LID LGRKQLMKIGS+GYIISL+MVGW FYTGASS+LLL F+  FIASHA+GQGAVIWVFISEIFP KV A GQSW
Sbjct:    1 MNKRILRISLTAALAGFLFGFDTVVISGANLPIKELWQTSPWFHGTFIMSMALWGTVLGSLFGGIPCDRLGRKKTLFWIGVLYTISALGSAVASDPYIFSFFRLIGGLGVGASSVAAPIYISEISTAQNRGKLGALYQFNIVFGIFIAFISNYLLKGFDGANDWRWMLGVEAIPAVIYCIMVLQVPNSPRWLVLNRKDEAGALKMLTYISDKAQALIKLEEIKNSIGVKTAKAGLFEGKYKKPLVLAFLIAFFNQLSGINFVLYYAPEILERAGLGGKESLFNSISIGIINLIFTLIGIQLIDRLGRKQLMKIGSLGYIISLSMVGWCFYTGASSTLLLIFICAFIASHAIGQGAVIWVFISEIFPNKVRAYGQSW 376          
BLAST of mRNA_E-siliculosus-1a_F_contig11383.912.1 vs. uniprot
Match: UPI0006477B04 (sugar porter family MFS transporter n=1 Tax=Cellulophaga sp. Hel_I_12 TaxID=1249972 RepID=UPI0006477B04)

HSP 1 Score: 590 bits (1522), Expect = 2.030e-209
Identity = 288/376 (76.60%), Postives = 329/376 (87.50%), Query Frame = 1
Query:    1 MNSKILRIALTASLSGFLFGFDTVVISGANLPIKELWNTSPWFHGTFIMSMALWGTVLGSLLGGIPCDKFGRKKTLFWIGILYAASALGSALANDPYVFSFFRFIGGLGVGASSVAAPIYISEMSSSTNRGKLGGLYQFNLVLGILIAFISNYLLQGFGGENDWRWMLGVEAIPAILYTIMVLQIPNSPRWLAINRQNQQGALDTLNLLYAASEAQKKLSEIKQSLSLSTIKENLFSGRYKVPLMLAFLLAFFNQLSGINFVLYYAPEILERAGLASQESLFSSIAIGIVNLVFTFIGIWLIDNLGRKQLMKIGSIGYIISLAMVGWWFYTGASSSLLLTFVLIFIASHAVGQGAVIWVFISEIFPQKVSASGQSW 1128
            MN+KI+RIALTA+L+GFLFGFDTVVISGANLPIK+LWNTSPWFHGTFIMSMALWGTV+GSLLG IPCD+ GRKKTLFWIG+LY  SALGSALA DPY+FSFFRFIGGLGVGASSVAAPIYISE+SS+ NRGKLG  YQFN+V GI IAFISNY L+GF G NDWRWMLGVEAIPAI+YT+MVL+IPNSPRWLAI + + +GAL  L  +     A  KL EIK+SL  +  KE LF+G Y  P++LAFL++FFNQLSGINFVLYYAPEILERAGL  ++SLF+SI+IGIVNL+FT +G+ LID LGR+QLM IGS+GYIISL MVGW FYTGAS++LLL FVL+FIASHA+GQGAVIWVFISEIFP KV A+GQSW
Sbjct:    1 MNAKIIRIALTAALAGFLFGFDTVVISGANLPIKQLWNTSPWFHGTFIMSMALWGTVIGSLLGSIPCDRIGRKKTLFWIGVLYTISALGSALAPDPYLFSFFRFIGGLGVGASSVAAPIYISEISSAENRGKLGASYQFNIVFGIFIAFISNYFLKGFDGINDWRWMLGVEAIPAIIYTVMVLKIPNSPRWLAIRKNDDEGALKVLETISTKELAVTKLKEIKESLQRNLSKEKLFNGTYNKPIILAFLISFFNQLSGINFVLYYAPEILERAGLGGEDSLFASISIGIVNLIFTLVGVRLIDQLGRRQLMFIGSVGYIISLGMVGWCFYTGASATLLLIFVLVFIASHAIGQGAVIWVFISEIFPNKVRAAGQSW 376          
BLAST of mRNA_E-siliculosus-1a_F_contig11383.912.1 vs. uniprot
Match: UPI0013CFDA41 (sugar porter family MFS transporter n=2 Tax=Flagellimonas TaxID=444459 RepID=UPI0013CFDA41)

HSP 1 Score: 589 bits (1519), Expect = 7.200e-209
Identity = 288/376 (76.60%), Postives = 334/376 (88.83%), Query Frame = 1
Query:    1 MNSKILRIALTASLSGFLFGFDTVVISGANLPIKELWNTSPWFHGTFIMSMALWGTVLGSLLGGIPCDKFGRKKTLFWIGILYAASALGSALANDPYVFSFFRFIGGLGVGASSVAAPIYISEMSSSTNRGKLGGLYQFNLVLGILIAFISNYLLQGFGGENDWRWMLGVEAIPAILYTIMVLQIPNSPRWLAINRQNQQGALDTLNLLYAASEAQKKLSEIKQSLSLSTIKENLFSGRYKVPLMLAFLLAFFNQLSGINFVLYYAPEILERAGLASQESLFSSIAIGIVNLVFTFIGIWLIDNLGRKQLMKIGSIGYIISLAMVGWWFYTGASSSLLLTFVLIFIASHAVGQGAVIWVFISEIFPQKVSASGQSW 1128
            MN++I RI+LTA+L+GFLFGFDTVVISGANLPIKELW+T+P FHG FIMSMALWGTVLGSL GG+PCDK GRKKTL WIG+LY  SALGSALA+DPY+FSFFRFIGG+GVGASSVAAPIYISE+S+  NRGKLG +YQFN+V GI IAFISNYLL+GFGG NDWRWMLGVEAIPA+ YT+MVL IPNSPRWL + RQ++ GAL TL  +     A K+L+EIK++L  S  K++LFSG+Y   L+LAF LAFFNQLSGINF+LYYAPEILERAGLA++ESLFSSI+IGIVNL+FT +GI LID+LGRKQLMKIGSIGYI+SLA+VGW FY+ ASS+LLL+F+L+FIASHA+GQGAVIWVFISEIFP KV ASGQSW
Sbjct:    1 MNNRIFRISLTAALAGFLFGFDTVVISGANLPIKELWDTTPLFHGIFIMSMALWGTVLGSLFGGVPCDKLGRKKTLIWIGVLYFVSALGSALAHDPYLFSFFRFIGGVGVGASSVAAPIYISEISTPDNRGKLGAMYQFNIVFGIFIAFISNYLLEGFGGTNDWRWMLGVEAIPALAYTVMVLSIPNSPRWLMMKRQDEDGALRTLEYISNKEVAIKRLNEIKEALGKSFSKDSLFSGKYNKQLLLAFFLAFFNQLSGINFILYYAPEILERAGLAAKESLFSSISIGIVNLIFTLVGIRLIDHLGRKQLMKIGSIGYIVSLAVVGWCFYSDASSTLLLSFILVFIASHAIGQGAVIWVFISEIFPNKVRASGQSW 376          
BLAST of mRNA_E-siliculosus-1a_F_contig11383.912.1 vs. uniprot
Match: A0A7Y3F2J1_9FLAO (Sugar porter family MFS transporter n=2 Tax=Eudoraea TaxID=446680 RepID=A0A7Y3F2J1_9FLAO)

HSP 1 Score: 587 bits (1513), Expect = 5.480e-208
Identity = 287/376 (76.33%), Postives = 329/376 (87.50%), Query Frame = 1
Query:    1 MNSKILRIALTASLSGFLFGFDTVVISGANLPIKELWNTSPWFHGTFIMSMALWGTVLGSLLGGIPCDKFGRKKTLFWIGILYAASALGSALANDPYVFSFFRFIGGLGVGASSVAAPIYISEMSSSTNRGKLGGLYQFNLVLGILIAFISNYLLQGFGGENDWRWMLGVEAIPAILYTIMVLQIPNSPRWLAINRQNQQGALDTLNLLYAASEAQKKLSEIKQSLSLSTIKENLFSGRYKVPLMLAFLLAFFNQLSGINFVLYYAPEILERAGLASQESLFSSIAIGIVNLVFTFIGIWLIDNLGRKQLMKIGSIGYIISLAMVGWWFYTGASSSLLLTFVLIFIASHAVGQGAVIWVFISEIFPQKVSASGQSW 1128
            M+ +I RI+LTA+L+GFLFGFDTVVISGANLPIKELWNTSPWFHGTFIMSMALWGTV+GSL GGIPCD FGRKKTLFWIG+LY  SA+GSALA DPY+FSFFRFIGGLGVGASSVAAPIY+SE+SSS NRG+L  LYQFN+V GI IAFISNYLL+GF G NDWRWMLGVEAIPA +Y++MVL+IPNSPRWL I +Q+ + AL  L  L     AQ+KL EIK S  +S  +E LF+ +YK PL+LAFL+AFFNQLSGINF+LYYAPEILERAGLA++ESLFSSI+IGIVNL+FT +GI LID +GR++LM IGSIGYIISLAMVGW FY+GA S++LL F+LIFIASHA+GQGAVIWVFISEIFP KV A GQSW
Sbjct:    1 MDKRIFRISLTAALAGFLFGFDTVVISGANLPIKELWNTSPWFHGTFIMSMALWGTVVGSLFGGIPCDLFGRKKTLFWIGVLYFISAMGSALAVDPYMFSFFRFIGGLGVGASSVAAPIYVSEISSSKNRGQLVALYQFNIVFGIFIAFISNYLLKGFDGANDWRWMLGVEAIPAFIYSLMVLKIPNSPRWLVIKKQDNKRALKVLEFLSNKEHAQQKLEEIKNSFKVSDAQEKLFTSKYKKPLILAFLIAFFNQLSGINFILYYAPEILERAGLAARESLFSSISIGIVNLIFTLVGIRLIDKVGRRELMNIGSIGYIISLAMVGWCFYSGADSTILLVFILIFIASHAIGQGAVIWVFISEIFPNKVRAFGQSW 376          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig11383.912.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3B0C7M3_9FLAO5.540e-23284.57Sugar porter family MFS transporter n=2 Tax=Flavob... [more]
A4AMQ8_MARSH1.270e-22582.18Xylose transporter n=2 Tax=unclassified Maribacter... [more]
A0A846QPN6_9FLAO1.880e-22480.85Sugar porter (SP) family MFS transporter n=1 Tax=S... [more]
UPI00126A5BB73.790e-22483.24sugar porter family MFS transporter n=1 Tax=Pelagi... [more]
A0A2N0FTA6_9FLAO2.450e-22281.91Sugar porter (SP) family MFS transporter n=3 Tax=F... [more]
A0A5B7SSV5_9FLAO4.530e-22081.65Sugar porter family MFS transporter n=1 Tax=Aggreg... [more]
A0A0S1SED5_9FLAO4.280e-21277.39MFS transporter n=1 Tax=Sediminicola sp. YIK13 Tax... [more]
UPI0006477B042.030e-20976.60sugar porter family MFS transporter n=1 Tax=Cellul... [more]
UPI0013CFDA417.200e-20976.60sugar porter family MFS transporter n=2 Tax=Flagel... [more]
A0A7Y3F2J1_9FLAO5.480e-20876.33Sugar porter family MFS transporter n=2 Tax=Eudora... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig11383contigE-siliculosus-1a_F_contig11383:838..1965 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop0
Cds size1128
Model size1128
Exons1
Hectar predicted targeting categorysignal peptide
Best eggNOG OGNA|NA|NA
Best tax levelMaribacter
COG Functional cat.EGP
EggNOG OGs1HY74@117743,2PG58@252356,4NE09@976,COG0477@1,COG2814@2
EggNOG free text desc.Sugar (and other) transporter
Preferred namexylE
Seed eggNOG ortholog313603.FB2170_03315
Seed ortholog evalue6.3e-178
Seed ortholog score630.2
Taxonomic scopeBacteria
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927648.9420907-CDS-E-siliculosus-1a_F_contig11383:837..19651622927648.9420907-CDS-E-siliculosus-1a_F_contig11383:837..1965Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig11383 838..1965 +
1696318624.4553623-CDS-E-siliculosus-1a_F_contig11383:837..19651696318624.4553623-CDS-E-siliculosus-1a_F_contig11383:837..1965Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig11383 838..1965 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig11383.912.1prot_E-siliculosus-1a_F_contig11383.912.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig11383 838..1965 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig11383.912.1

>prot_E-siliculosus-1a_F_contig11383.912.1 ID=prot_E-siliculosus-1a_F_contig11383.912.1|Name=mRNA_E-siliculosus-1a_F_contig11383.912.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=376bp
MNSKILRIALTASLSGFLFGFDTVVISGANLPIKELWNTSPWFHGTFIMS
MALWGTVLGSLLGGIPCDKFGRKKTLFWIGILYAASALGSALANDPYVFS
FFRFIGGLGVGASSVAAPIYISEMSSSTNRGKLGGLYQFNLVLGILIAFI
SNYLLQGFGGENDWRWMLGVEAIPAILYTIMVLQIPNSPRWLAINRQNQQ
GALDTLNLLYAASEAQKKLSEIKQSLSLSTIKENLFSGRYKVPLMLAFLL
AFFNQLSGINFVLYYAPEILERAGLASQESLFSSIAIGIVNLVFTFIGIW
LIDNLGRKQLMKIGSIGYIISLAMVGWWFYTGASSSLLLTFVLIFIASHA
VGQGAVIWVFISEIFPQKVSASGQSW
back to top

mRNA from alignment at E-siliculosus-1a_F_contig11383:838..1965+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig11383.912.1 ID=mRNA_E-siliculosus-1a_F_contig11383.912.1|Name=mRNA_E-siliculosus-1a_F_contig11383.912.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1128bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig11383:838..1965+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGAATTCTAAAATTCTTCGTATTGCATTAACAGCATCATTATCTGGTTT CTTATTCGGATTTGACACAGTAGTTATAAGTGGTGCAAATCTGCCCATAA AGGAGCTTTGGAATACATCGCCATGGTTTCATGGCACTTTCATTATGTCA ATGGCTTTGTGGGGTACAGTACTTGGTTCACTTTTGGGAGGAATACCGTG TGACAAATTTGGTAGAAAGAAAACACTTTTTTGGATTGGAATTTTATATG CCGCATCTGCTCTGGGTTCAGCATTAGCAAATGACCCTTACGTCTTTTCA TTTTTTAGATTTATTGGAGGTTTGGGGGTTGGCGCATCTTCTGTTGCAGC ACCTATATATATTTCTGAAATGTCATCGTCGACCAACAGGGGTAAACTGG GCGGGCTATATCAGTTCAATCTAGTTTTAGGTATTTTGATAGCCTTTATT TCAAATTATTTACTTCAAGGATTTGGTGGAGAAAATGATTGGCGATGGAT GTTAGGTGTCGAAGCGATACCTGCGATTCTTTATACCATCATGGTTTTAC AAATTCCTAACAGTCCTAGATGGTTAGCCATCAATCGACAAAATCAACAA GGAGCATTAGACACACTTAACCTACTTTATGCTGCAAGTGAAGCTCAAAA AAAACTTAGTGAAATCAAACAAAGCCTATCGTTATCGACTATAAAGGAAA ATCTATTTTCTGGTCGCTATAAAGTCCCTTTGATGTTGGCATTTTTGTTG GCATTTTTTAATCAACTCTCAGGTATAAACTTCGTTTTATACTACGCCCC TGAAATTCTCGAAAGAGCCGGACTAGCTTCACAAGAATCGTTATTTAGTT CTATCGCCATCGGAATTGTAAACCTTGTTTTTACATTTATAGGCATTTGG TTGATTGATAATTTAGGTAGAAAACAATTGATGAAAATCGGTTCTATCGG TTATATTATTAGTCTTGCTATGGTAGGCTGGTGGTTCTATACTGGTGCTA GTTCTTCCCTTTTACTAACTTTCGTCTTAATATTTATTGCCTCCCATGCA GTTGGGCAAGGAGCGGTGATTTGGGTTTTCATTTCAGAAATTTTTCCACA AAAGGTAAGCGCATCAGGTCAGTCTTGG
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig11383:838..1965+

>mRNA_E-siliculosus-1a_F_contig11383.912.1 ID=mRNA_E-siliculosus-1a_F_contig11383.912.1|Name=mRNA_E-siliculosus-1a_F_contig11383.912.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2256bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig11383:838..1965+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGAATTCTAAAATTCTTCGTATTGCATTAACAGCATCATTATCTGGTTT
CTTATTCGGATTTGACACAGTAGTTATAAGTGGTGCAAATCTGCCCATAA
AGGAGCTTTGGAATACATCGCCATGGTTTCATGGCACTTTCATTATGTCA
ATGGCTTTGTGGGGTACAGTACTTGGTTCACTTTTGGGAGGAATACCGTG
TGACAAATTTGGTAGAAAGAAAACACTTTTTTGGATTGGAATTTTATATG
CCGCATCTGCTCTGGGTTCAGCATTAGCAAATGACCCTTACGTCTTTTCA
TTTTTTAGATTTATTGGAGGTTTGGGGGTTGGCGCATCTTCTGTTGCAGC
ACCTATATATATTTCTGAAATGTCATCGTCGACCAACAGGGGTAAACTGG
GCGGGCTATATCAGTTCAATCTAGTTTTAGGTATTTTGATAGCCTTTATT
TCAAATTATTTACTTCAAGGATTTGGTGGAGAAAATGATTGGCGATGGAT
GTTAGGTGTCGAAGCGATACCTGCGATTCTTTATACCATCATGGTTTTAC
AAATTCCTAACAGTCCTAGATGGTTAGCCATCAATCGACAAAATCAACAA
GGAGCATTAGACACACTTAACCTACTTTATGCTGCAAGTGAAGCTCAAAA
AAAACTTAGTGAAATCAAACAAAGCCTATCGTTATCGACTATAAAGGAAA
ATCTATTTTCTGGTCGCTATAAAGTCCCTTTGATGTTGGCATTTTTGTTG
GCATTTTTTAATCAACTCTCAGGTATAAACTTCGTTTTATACTACGCCCC
TGAAATTCTCGAAAGAGCCGGACTAGCTTCACAAGAATCGTTATTTAGTT
CTATCGCCATCGGAATTGTAAACCTTGTTTTTACATTTATAGGCATTTGG
TTGATTGATAATTTAGGTAGAAAACAATTGATGAAAATCGGTTCTATCGG
TTATATTATTAGTCTTGCTATGGTAGGCTGGTGGTTCTATACTGGTGCTA
GTTCTTCCCTTTTACTAACTTTCGTCTTAATATTTATTGCCTCCCATGCA
GTTGGGCAAGGAGCGGTGATTTGGGTTTTCATTTCAGAAATTTTTCCACA
AAAGGTAAGCGCATCAGGTCAGTCTTGGATGAATTCTAAAATTCTTCGTA
TTGCATTAACAGCATCATTATCTGGTTTCTTATTCGGATTTGACACAGTA
GTTATAAGTGGTGCAAATCTGCCCATAAAGGAGCTTTGGAATACATCGCC
ATGGTTTCATGGCACTTTCATTATGTCAATGGCTTTGTGGGGTACAGTAC
TTGGTTCACTTTTGGGAGGAATACCGTGTGACAAATTTGGTAGAAAGAAA
ACACTTTTTTGGATTGGAATTTTATATGCCGCATCTGCTCTGGGTTCAGC
ATTAGCAAATGACCCTTACGTCTTTTCATTTTTTAGATTTATTGGAGGTT
TGGGGGTTGGCGCATCTTCTGTTGCAGCACCTATATATATTTCTGAAATG
TCATCGTCGACCAACAGGGGTAAACTGGGCGGGCTATATCAGTTCAATCT
AGTTTTAGGTATTTTGATAGCCTTTATTTCAAATTATTTACTTCAAGGAT
TTGGTGGAGAAAATGATTGGCGATGGATGTTAGGTGTCGAAGCGATACCT
GCGATTCTTTATACCATCATGGTTTTACAAATTCCTAACAGTCCTAGATG
GTTAGCCATCAATCGACAAAATCAACAAGGAGCATTAGACACACTTAACC
TACTTTATGCTGCAAGTGAAGCTCAAAAAAAACTTAGTGAAATCAAACAA
AGCCTATCGTTATCGACTATAAAGGAAAATCTATTTTCTGGTCGCTATAA
AGTCCCTTTGATGTTGGCATTTTTGTTGGCATTTTTTAATCAACTCTCAG
GTATAAACTTCGTTTTATACTACGCCCCTGAAATTCTCGAAAGAGCCGGA
CTAGCTTCACAAGAATCGTTATTTAGTTCTATCGCCATCGGAATTGTAAA
CCTTGTTTTTACATTTATAGGCATTTGGTTGATTGATAATTTAGGTAGAA
AACAATTGATGAAAATCGGTTCTATCGGTTATATTATTAGTCTTGCTATG
GTAGGCTGGTGGTTCTATACTGGTGCTAGTTCTTCCCTTTTACTAACTTT
CGTCTTAATATTTATTGCCTCCCATGCAGTTGGGCAAGGAGCGGTGATTT
GGGTTTTCATTTCAGAAATTTTTCCACAAAAGGTAAGCGCATCAGGTCAG
TCTTGG
back to top