mRNA_E-siliculosus-1a_F_contig1118.789.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1118.789.1 vs. uniprot
Match: D7G0I7_ECTSI (PhyA2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0I7_ECTSI) HSP 1 Score: 1091 bits (2822), Expect = 0.000e+0 Identity = 533/549 (97.09%), Postives = 535/549 (97.45%), Query Frame = 1
Query: 70 MPSNKHAACSHALKPPLKPLVLAAVMMVTSCSSRTPDGLIVVSRHGVRRQFPSSTHDFSKYAPGKTFETEDKDWGVDGSMGVLTQHGYDAAHLMGKFQGQKYAGDGLPLDSCSDMFVYCEEASRGGSGDRDMPRDEFTAEAFFKGFTEGWTAAGGDATVGSCPVPEPHFEEVEYLIDQGSKPRGDAGQCRLGSEQEVQGVVGKVDEWTRLLRSKLQKLNDVLGCCDRSLCPADHPEDQPCTLMDMPHVWDEEHWYVTFTGPVYAGKYFSEWFLLNYLNGMDVAWGELSEEDVMDLAAFVTEYRHFEFDLLAARPFGSALLMHVVAALDQMETGENLDAVAHTPDVKLVYYAAHDTNLLYLAELLDLKWVSKGWQPNHTPPGGELVFEAYMVDGELNVAAFFDIATPSQIRELTDLTPSNPPGRVAITIPGCSQGEELLCPLSKLRALAIRSVDAECITPPELVEYVSDSWAKDAVVLQAEAAQGGDDDVVMHARVTPNMGQLLVGLMMGLAVGGMAVWGLRSKVGAAGLRNRGGGRDDDNVELLRDGGP 1716
MPSNKHA+ SHALKP LKPLVLA VMMVTSCSSRTPDGLIVVSRHGVRRQFPSSTHDFSKYAPGKTFETEDKDWGVDGSMGVLTQHGYDAAHLMGKFQGQKYAGDGLPLDSCSDMFVYCEE DMPRDEFTAEAFFKGFTEGWTAAGGDA VGSCPVPEPHFEEVEYLIDQGSKPRGDAGQCRLGSEQEVQGVVGKVDEWTRLLRSKLQKLNDVLGCCDRSLCPADHPEDQPCTLMDMPHVWDEEHWYVTFTGPVYAGKYFSEWFLLNYLNGMDVAWGELSEEDVMDLAAFVTEYRHFEFDLLAARPFGSALLMHVVAALDQMETGENLDAVAHTPDVKLVYYAAHDTNLLYLAELLDLKWVSKGWQPNHTPPGGELVFEAYMVDGELNVAAFFDIATPSQIRELTDL+PSNPPGRVAITIPGCSQGEELLCPLSKLRALAIRSVDAECITPPELVEYVSDSWAKDAVVLQAEAAQGGDDDVVMHARVTPNMGQLLVGLMMGLAVGGMA WGLRSKVGAAGLRNRGGGRDDDNVELLRDGGP
Sbjct: 1 MPSNKHASYSHALKPCLKPLVLATVMMVTSCSSRTPDGLIVVSRHGVRRQFPSSTHDFSKYAPGKTFETEDKDWGVDGSMGVLTQHGYDAAHLMGKFQGQKYAGDGLPLDSCSDMFVYCEE---------DMPRDEFTAEAFFKGFTEGWTAAGGDAAVGSCPVPEPHFEEVEYLIDQGSKPRGDAGQCRLGSEQEVQGVVGKVDEWTRLLRSKLQKLNDVLGCCDRSLCPADHPEDQPCTLMDMPHVWDEEHWYVTFTGPVYAGKYFSEWFLLNYLNGMDVAWGELSEEDVMDLAAFVTEYRHFEFDLLAARPFGSALLMHVVAALDQMETGENLDAVAHTPDVKLVYYAAHDTNLLYLAELLDLKWVSKGWQPNHTPPGGELVFEAYMVDGELNVAAFFDIATPSQIRELTDLSPSNPPGRVAITIPGCSQGEELLCPLSKLRALAIRSVDAECITPPELVEYVSDSWAKDAVVLQAEAAQGGDDDVVMHARVTPNMGQLLVGLMMGLAVGGMAAWGLRSKVGAAGLRNRGGGRDDDNVELLRDGGP 540
BLAST of mRNA_E-siliculosus-1a_F_contig1118.789.1 vs. uniprot
Match: R1FLM4_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FLM4_EMIHU) HSP 1 Score: 474 bits (1219), Expect = 6.390e-159 Identity = 255/463 (55.08%), Postives = 307/463 (66.31%), Query Frame = 1
Query: 127 LVLAAVMMVTSCSSRTPDGLIVVSRHGVRRQFPSSTHDFSKYAPGKTFETEDKDWGVDGS-MGVLTQHGYDAAHLMGKFQGQKYAGDGLPLDS-CSD--MFVYCEEASRGGSGDRDMPRDEFTAEAFFKGFTEGWTAAGGDATVGSCPVPEPHFEEVEYLIDQGSKPRGDAGQCRLGSEQEVQGVVG-KVDEWTRLLRSKLQKLNDVLGCCDRSLCPADHPEDQPCTLMDMPHVWDEEHWYVTFTGPVYAGKYFSEWFLLNYLNGMDVAWGELSEEDVMDLAAFVTEYRHFEFDLLAARPFGSALLMHVVAALDQMETGENLDAVAHTPDVKLVYYAAHDTNLLYLAELLDLKWVSKGWQPNHTPPGGELVFEAYMVDGELN------VAAFFDIATPSQIRELTDLTPSNP---PGRVAITIPGCSQGEE------LLCPLSKLRALAIRSVDAECITPPEL 1455
L L A + + ++ PD I+VSRHGVRRQFPSS +FS YAPGK F+T D+ WG G MGVLTQHGY A MG +Q +YA D C+D FVYCEE +MPRDE TAEAFFKG C +P H E VEYLIDQGSKPRG+ GQC LG++ +V+G VG VD + RL + L KL+++LGCC +SLCPA + C+L D+P WD HWY TF+GP+YAGKYF+EW L LNGMD AWG+LS E+VM+ +AFVT+YR FEFDLLAARPFGSALL H+ A+L Q E+G+ A+AH P +LVYYAAHDTNLLYLAELL LKW+S G+QPNHTPPGG LVFEA+ N +A +FDI TP QIRELT L+ +P P RV +TIPGCS E LLCPLS L ++V ECITPP+L
Sbjct: 4 LPLGAASVAAATAAAVPDRAIIVSRHGVRRQFPSSAFNFSLYAPGKHFDTSDEAWGAGGEGMGVLTQHGYAAVQRMGAYQSGRYASLLSAADGGCADGAAFVYCEE---------NMPRDEKTAEAFFKGL--------------GCALPPLHSEGVEYLIDQGSKPRGENGQCALGTQAQVEGRVGGSVDGYLRLYKPLLAKLSELLGCCAKSLCPAGM---ESCSLEDLPGSWDPAHWYTTFSGPIYAGKYFAEWIELTMLNGMDFAWGKLSVEEVMEFSAFVTQYRAFEFDLLAARPFGSALLSHIAASLTQWESGQREPALAHDPSPRLVYYAAHDTNLLYLAELLGLKWLSHGYQPNHTPPGGALVFEAFGPANPANPLDEWQIALYFDIQTPLQIRELTVLSDDDPATTPSRVPVTIPGCSTKAEDDPHAPLLCPLSTFTRLVRQAVQPECITPPDL 440
BLAST of mRNA_E-siliculosus-1a_F_contig1118.789.1 vs. uniprot
Match: A0A6H5K0D8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0D8_9PHAE) HSP 1 Score: 448 bits (1153), Expect = 2.010e-153 Identity = 220/279 (78.85%), Postives = 223/279 (79.93%), Query Frame = 1
Query: 463 MPRDEFTAEAFFKGFTEGWTAAGGDATVGSCPVPEPHFEEVEYLIDQGSKPRGDAGQCRLGSEQEVQGVVGKVDEWTRLLRSKLQKLNDVLGCCDRSLCPADHPEDQPCTLMDMPHVWDEEHWYVTFTGPVYAGKYFSEWFLLNYLNGMDVAWGELSEEDVMDLAAFVTEYRHFEFDLLAARPFGSALLMHVVAALDQMETGENLDAVAHTPDVKLVYYAAHDTNLLYLAELLDLKWVSKGWQPNHTPPGGELVFEAYMVDGELNVAAFFDIATPSQIR 1299
MPRDEFTAEAFFKGFTEGWTAAGGD TVGSCPVPEPHFE VEYLIDQGSKPRGDAGQCRLGSEQEVQGVVGKVDEWTRLLRSKLQKLNDVLGCCDRSLCPADHPEDQPCTLMDMPHVWDEEHWYVTFTGPVYAGKYFSEWFLLNYLNGMDVAWGEL + ARP VKLVYYAAHDTNLLYLAELLDLKWVS+GWQPNHTPPGGELVFEAYM+DGELNVAAFFDIATPSQ R
Sbjct: 1 MPRDEFTAEAFFKGFTEGWTAAGGDTTVGSCPVPEPHFEGVEYLIDQGSKPRGDAGQCRLGSEQEVQGVVGKVDEWTRLLRSKLQKLNDVLGCCDRSLCPADHPEDQPCTLMDMPHVWDEEHWYVTFTGPVYAGKYFSEWFLLNYLNGMDVAWGELRWGRIRQ-----------------ARP---------------------------ARRVKLVYYAAHDTNLLYLAELLDLKWVSEGWQPNHTPPGGELVFEAYMLDGELNVAAFFDIATPSQAR 235
BLAST of mRNA_E-siliculosus-1a_F_contig1118.789.1 vs. uniprot
Match: R1DX28_EMIHU (Uncharacterized protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DX28_EMIHU) HSP 1 Score: 449 bits (1155), Expect = 3.020e-150 Identity = 241/429 (56.18%), Postives = 290/429 (67.60%), Query Frame = 1
Query: 142 VMMVTSCSS---RTPDGLIVVSRHGVRRQFPSSTHDFSKYAPGKTFETEDKDWGVDGS-MGVLTQHGYDAAHLMGKFQGQKYAGDGLPLDS-CSD--MFVYCEEASRGGSGDRDMPRDEFTAEAFFKGFTEGWTAAGGDATVGSCPVPEPHFEEVEYLIDQGSKPRGDAGQCRLGSEQEVQGVVG-KVDEWTRLLRSKLQKLNDVLGCCDRSLCPADHPEDQPCTLMDMPHVWDEEHWYVTFTGPVYAGKYFSEWFLLNYLNGMDVAWGELSEEDVMDLAAFVTEYRHFEFDLLAARPFGSALLMHVVAALDQMETGENLDAVAHTPDVKLVYYAAHDTNLLYLAELLDLKWVSKGWQPNHTPPGGELVFEAYMVDGELN------VAAFFDIATPSQIRELTDLTPSNP---PGRVAITIPGCSQGEE 1377
+ +VTS ++ PD I+VSRHGVRRQFPSS +FS YAPGK F+T D+ WG G MGVLTQHGY A MG +Q +YA D C+D FVYCEE +MPRDE TAEAFFKG C +P H E VEYLIDQGSKPRG+ GQC LG++ +V+G VG VD + RL + L KL+++LGCC +SLCPA + C+L D+P WD HWY TF+GP+YAGKYF+EW L LNGMD AWG+LS E+VM+L+AFVT+YR FEFDLLAARPFGSALL H+ A+L Q E+G+ A+AH P +LVYYAAHDTNLLYLAELL LKW+S G+QPNHTPPGG LVFEA+ N +A +FDI TP QIRELT L+ +P P RV +TIPGCS E
Sbjct: 1 MFLVTSAAAVGHAAPDRAIIVSRHGVRRQFPSSAFNFSLYAPGKHFDTSDEAWGAGGEGMGVLTQHGYAAVQRMGAYQSGRYASLLSAADGGCADGAAFVYCEE---------NMPRDEKTAEAFFKGL--------------GCALPPLHSEGVEYLIDQGSKPRGENGQCALGTQAQVEGRVGGSVDGYLRLYKPLLAKLSELLGCCAKSLCPAGM---ESCSLEDLPGSWDPAHWYTTFSGPIYAGKYFAEWIELTMLNGMDFAWGKLSVEEVMELSAFVTQYRAFEFDLLAARPFGSALLSHIAASLTQWESGQREPALAHDPSPRLVYYAAHDTNLLYLAELLGLKWLSHGYQPNHTPPGGALVFEAFGPANPANPLDEWQIALYFDIQTPLQIRELTVLSDDDPATTPSRVPVTIPGCSTEAE 403
BLAST of mRNA_E-siliculosus-1a_F_contig1118.789.1 vs. uniprot
Match: A0A7S0ECG0_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0ECG0_9EUKA) HSP 1 Score: 446 bits (1147), Expect = 5.210e-148 Identity = 237/460 (51.52%), Postives = 295/460 (64.13%), Query Frame = 1
Query: 124 PLVLAAVMMVTSCSSRTPDGLIVVSRHGVRRQFPSSTHDFSKYAPGKTFETEDKDWGVDGS-------MGVLTQHGYDAAHLMGKFQGQKYAGDGLPLDSCSDMFVYCEEASRGGSGDRDMPRDEFTAEAFFKGFTEGWTAAGGDATVGSCPVPEPHFEEVEYLIDQGSKPRGDAGQCRLGSEQEVQGVVG-KVDEWTRLLRSKLQKLNDVLGCCDRSLCPADHPEDQPCTLMDMPHVWDEEHWYVTFTGPVYAGKYFSEWFLLNYLNGMDVAWGELSEEDVMDLAAFVTEYRHFEFDLLAARPFGSALLMHVVAALDQMETGENLDAVAHTPDVKLVYYAAHDTNLLYLAELLDLKWVSKGWQPNHTPPGGELVFEAYMVD------GELNVAAFFDIATPSQIRELTDLTPSNP---PGRVAITIPGCS----QGEELLCPLSKLRALAIRSVDAECI 1440
PL + + ++T + D +I++SRHGVRRQFPS+ +FS YAPGK F+T D+ WG G MGVLTQHGY A MG +Q Q+Y + C +VYCEE MPRD TAEAFFKG +G P H E EYLIDQGS PRGD G+C LG++ +V+G VG VDE+ RL +++KL+++LGCCD SLC P C+L D+P +D++HWY TF+GP+YAGKYF+EW L LNGMD AWG+L+ E+VM+L+AFVT+YR FEFD+LAARPFGSALL HV A L Q G AV H +LVYYAAHDTNLLYLAELL+LKW++KGWQPNHTPPGG LV EA GE +A FFD+ TP Q+R+LTDL+ + P RV + +PGCS +G LLCPL L R+V AECI
Sbjct: 15 PLAGSMLPLLTLSLGYSADRVIIISRHGVRRQFPSAAFNFSLYAPGKDFDTSDESWGAAGGEHGSKAEMGVLTQHGYAAVERMGAYQSQRYKS---LVPGCRGAYVYCEEK---------MPRDAKTAEAFFKG-------------MGCETTPALHSEGAEYLIDQGSTPRGDQGECALGTQAQVEGRVGGSVDEYLRLYMPRIRKLSELLGCCDASLCGK--PAGSSCSLEDLPSAFDQKHWYTTFSGPMYAGKYFAEWIELTMLNGMDFAWGKLTVEEVMELSAFVTQYRAFEFDMLAARPFGSALLAHVGATLQQWAGGAAQPAVTHAASERLVYYAAHDTNLLYLAELLELKWLAKGWQPNHTPPGGMLVVEALAPTNDANPTGEWQLAVFFDVQTPQQVRDLTDLSDDDEATKPSRVPVAVPGCSVQLREGGPLLCPLPTFLQLVGRTVRAECI 447
BLAST of mRNA_E-siliculosus-1a_F_contig1118.789.1 vs. uniprot
Match: A0A7S3SNZ1_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3SNZ1_EMIHU) HSP 1 Score: 374 bits (961), Expect = 4.520e-122 Identity = 196/343 (57.14%), Postives = 236/343 (68.80%), Query Frame = 1
Query: 475 EFTAEAFFKGFTEGWTAAGGDATVGSCPVPEPHFEEVEYLIDQGSKPRGDAGQCRLGSEQEVQGVVG-KVDEWTRLLRSKLQKLNDVLGCCDRSLCPADHPEDQPCTLMDMPHVWDEEHWYVTFTGPVYAGKYFSEWFLLNYLNGMDVAWGELSEEDVMDLAAFVTEYRHFEFDLLAARPFGSALLMHVVAALDQMETGENLDAVAHTPDVKLVYYAAHDTNLLYLAELLDLKWVSKGWQPNHTPPGGELVFEAYMVDGELN------VAAFFDIATPSQIRELTDLTPSNP---PGRVAITIPGCSQGEE------LLCPLSKLRALAIRSVDAECITPPEL 1455
E TAEAFFKG C +P H E VEYLIDQGSKPRG+ GQC LG++ +V+G VG VD + RL + L KL+++LGCC +SLCPA + C+L D+P WD HWY TF+GP+YAGKYF+EW L LNGMD AWG+LS E+VM+L+AFVT+YR FEFDLLAARPFGSALL H+ A+L Q E+G+ A+AH P +LVYYAAHDTNLLYLAELL LKW+S G+QPNHTPPGG LVFEA+ N +A +FDI TP QIRELT L+ +P P RV +TIPGCS E LLCPLS L ++V ECITPP+L
Sbjct: 1 EKTAEAFFKGL--------------GCALPPLHSEGVEYLIDQGSKPRGENGQCALGTQAQVEGRVGGSVDGYLRLYKPLLAKLSELLGCCAKSLCPAGM---ESCSLEDLPGSWDPAHWYTTFSGPIYAGKYFAEWIELTMLNGMDFAWGKLSVEEVMELSAFVTQYRAFEFDLLAARPFGSALLSHIAASLTQWESGQREPALAHDPSPRLVYYAAHDTNLLYLAELLGLKWLSHGYQPNHTPPGGALVFEAFGPANPANPLDEWQIALYFDIQTPLQIRELTVLSDDDPATTPSRVPVTIPGCSTKAEGDPHAPLLCPLSTFTRLVRQAVQPECITPPDL 326
BLAST of mRNA_E-siliculosus-1a_F_contig1118.789.1 vs. uniprot
Match: A0A024TG40_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TG40_9STRA) HSP 1 Score: 175 bits (444), Expect = 1.270e-44 Identity = 145/506 (28.66%), Postives = 217/506 (42.89%), Query Frame = 1
Query: 130 VLAAVMMVTSCSSRTPDGLIVVSRHGVRRQF-----PSSTHDFSKYAPGK-TFETEDKDWGVDGSMGVL-----TQHGYDAAHLMGKFQGQK-YAGDGLPLDSCSDMFVYCEEASRGGSGDRDMPRDEFTAEAFFKGFTEGWTAAGGDATVGSCPVPEPHFEEVEYLIDQGSKPRGDAGQCRLGSEQEVQGVVGK--VDEWTRLLRSKLQKLNDVLGCCDRSLCPADHPEDQPCTLMDMPHVWDEEHWYVTFTGPVYAGKYFSEWFLLNYLNGMDVAWGELSEEDVMDLAAFVTEYRHFEFDLLAARPFGSALLMHVVAALDQMETGENLDAVAHTPDVK-----------LVYYAAHDTNLLYLAELLDLKWVSKGWQPNHTPPGGELVFEAYM------VDGELNVAAFFDIATPSQIRELTDLTPSNPPGRVAITIPGCSQGEELL-------CPLSKLRALAIRSVDAECITP-----------PELVEYVSDSWAKDAVVL 1500
+LAA MM ++ + ++VVSRHGVR + P + + +Y+ K F + +WG + L T+HG MG++ Q Y SC D F Y + D RD TA+ F GF +C P L +QG P C + S +G+VG D RL ++ +LN V+ CC+ +C + + C L +P W + +Y + + ++ SEWFLL LN M + ++ +DV+ L A + + + FGS LL+H+VA++ Q + +AVA D ++YA HD NLL+L LL L+W ++ W + PG LV E + + + V AFF A+P+QIR LTP NPP RV + IP CSQ L C S + A ++ C++P P V S SWA VV+
Sbjct: 14 ILAASMMASAELRQ----VLVVSRHGVRGPYGPDDLPPTETNMQRYSKNKFPFPVKGTEWGTSNNDAELVTPKITKHGAQVIRRMGEYFAQHLYPSIAAASASCGDAFAYAD----------DNERDYITAQEFLHGFLP------------TCADLSPVTNGTRLLFEQGQDP---TATCPVASHSMYEGIVGASTTDNVARLFERQIARLNAVVDCCEPVVCNSTAADG--CDLFHVPSTWTGK-FYDPWHDSLSEAQFLSEWFLLQSLNNMSLP-PSMALDDVVALGAIHKAHMDLVTNQFNSENFGSTLLVHLVASMQQTIQQSSPEAVARHRDDDGPHLLQSLSNTFLFYAGHDINLLFLKNLLRLEWETENWLADQPNPGSMLVLELHADRPHSTAETDFYVEAFFMAASPTQIRHAQVLTPENPPDRVPVAIPHCSQDIVLANGTAAVRCAFSDFKHAAGLAIRQACVSPSLAKFAASLLAPTRVPRHSASWAFKVVVV 486
BLAST of mRNA_E-siliculosus-1a_F_contig1118.789.1 vs. uniprot
Match: A0A1V9YF74_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YF74_9STRA) HSP 1 Score: 174 bits (442), Expect = 2.250e-44 Identity = 139/488 (28.48%), Postives = 215/488 (44.06%), Query Frame = 1
Query: 139 AVMMVTSCSSRTPDGLIVVSRHGVRRQF-----PSSTHDFSKYAPGK-TFETEDKDWGVDGSMGVL-----TQHGYDAAHLMGK-FQGQKYAGDGLPLDSCSDMFVYCEEASRGGSGDRDMPRDEFTAEAFFKGFTEGWTAAGGDATVGSCPVPEPHFEEVEYLIDQGSKPRGDAGQCRLGSEQEVQGVVGKV--DEWTRLLRSKLQKLNDVLGCCDRSLCPADHPED-----QPCTLMDMPHVWDEEHWYVTFTGPVYAGKYFSEWFLLNYLNGMDVAWGELSEEDVMDLAAFVTEYRHFEFDLLAARPFGSALLMHVVAALDQMETGENLDA-------VAHTPDVKLVYYAAHDTNLLYLAELLDLKWVSKGWQPNHTPPGGELVFEAYMVDG--------ELNVAAFFDIATPSQIRELTDLTPSNPPGRVAITIPGCSQGE-------ELLCPLSKLRALAIRSVDAECITPPELVEYVSDSW 1479
++ ++ + +++ + VVSRHGVR + P + + +Y+ + F +WG ++ L T HG + MG+ F Y P ++C+ F Y + D RD TA+AF GF +C +P L +QG P C S+ G+VG V D R L ++Q+LNDV+ CC +C A C L +P W + +Y ++ +Y SEWFLL LN M + + + ED+++L A + + A FGS LL+H+VA++D+ T + + H + +YYA HD NLLYL LL ++W + W N PG L+FE + +G + V A+F A+P QIR L+P NPP RV ++IP CSQ ++ C +A +SV C++ L Y S W
Sbjct: 7 SLTLIATAAAQGLRQVAVVSRHGVRGPYGPDGLPPTLANLQRYSKNQFPFPVLATEWGTSDNVSELVSPKLTAHGRNVIQRMGEYFAAHMYPTLAKP-ETCTKTFAYAD----------DNERDIDTAQAFLDGFLPP-----------ACAGVKPDTTGARLLFEQGQDP---TAICPATSQTLYHGIVGNVTADNIIRHLAPEIQELNDVVDCCKPEVCTATSARSLLAQASTCNLFTVPSTWSGK-FYEPWSDAFSEAQYLSEWFLLQSLNNMTLPPSK-TLEDMIELGAVHNAHIQLITNQFNAENFGSTLLVHLVASMDEAITQRPVPIAPGTGPHLLHDIASRFLYYAGHDINLLYLKNLLRMEWDTNNWNANQPNPGSMLLFEVHADEGKETSTSVEDFFVQAYFVAASPKQIRRAEVLSPQNPPIRVPVSIPQCSQDVVLPSNKVQVQCRFVDFKATVGKSVRHACVSE-SLQSYASTLW 466
BLAST of mRNA_E-siliculosus-1a_F_contig1118.789.1 vs. uniprot
Match: W4FST5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FST5_9STRA) HSP 1 Score: 169 bits (428), Expect = 2.400e-42 Identity = 142/499 (28.46%), Postives = 210/499 (42.08%), Query Frame = 1
Query: 139 AVMMVTSCSSRTPDGLIVVSRHGVRRQF-----PSSTHDFSKYAPGK-TFETEDKDWGVDGSMGVL-----TQHG---------YDAAHLMGKFQGQKYAGDGLPLDSCSDMFVYCEEASRGGSGDRDMPRDEFTAEAFFKGFTEGWTAAGGDATVGSCPVPEPHFEEVEYLIDQGSKPRGDAGQCRLGSEQEVQGVVG--KVDEWTRLLRSKLQKLNDVLGCCDRSLCPADHPEDQPCTLMDMPHVWDEEHWYVTFTGPVYAGKYFSEWFLLNYLNGMDVAWGELSEEDVMDLAAFVTEYRHFEFDLLAARPFGSALLMHVVAALDQ---------METGEN--------LDAVAH---TPDVKLVYYAAHDTNLLYLAELLDLKWVSKGWQPNHTPPGGELVFEAYMV------DGELNVAAFFDIATPSQIRELTDLTPSNPPGRVAITIPGCSQGEEL-------LCPLSKLRALAIRSVDAECITPPELVEYVS 1470
AV MVT+ ++VVSRHGVR + P + + +Y+ K F + DWG L T+HG Y A HL + C+D F Y + D RD TA+ F GF C P L +QG P C + S+ QG+VG D R ++ LN +LGCC+ +C + DQ C L +P W + +Y + + ++ SEWFLL LN M + ++ DV+ L + + + FGS LL+H+VA++ Q +++G D H + K ++YA HD NLL+L LL L+W ++ W N PG LVFE + + + V A+F A+PSQIR L+P NPP RV +TIP CSQ L C + + A ++ +C++P L +Y +
Sbjct: 5 AVAMVTTMVCAELRQVLVVSRHGVRGPYGPEGLPPTEANMQRYSKDKYPFPVKATDWGTSDDATELVSPKITKHGARVIRNMGEYFAKHLYPSYMAAAAVTTSPASAVCADAFAYAD----------DNERDYLTAQEFLHGFLP------------HCSELSPVINGTRLLFEQGQDP---TATCPVASQAMYQGIVGGPTTDNVARQYAVEISSLNSLLGCCEPVVCGLRNATDQ-CDLFHVPSAWTGK-FYEPWQDSLSEAQFLSEWFLLQSLNNMSLP-PAMTLADVVSLGVIHKVHMDLITNEFNSENFGSTLLVHLVASMQQTIQQASPVSVKSGNKSGNHXXXXXDQGPHLLQSLSNKFLFYAGHDINLLFLKNLLRLEWETENWLSNQPNPGSMLVFELHTEQPHSTSEVDFYVQAYFVAASPSQIRHAETLSPHNPPDRVEVTIPHCSQDVVLPNGTAAVRCTFTDFKQAAGLAIRQQCVSPT-LAKYAA 474
BLAST of mRNA_E-siliculosus-1a_F_contig1118.789.1 vs. uniprot
Match: A0A6G0WHA8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WHA8_9STRA) HSP 1 Score: 166 bits (421), Expect = 1.380e-41 Identity = 137/483 (28.36%), Postives = 209/483 (43.27%), Query Frame = 1
Query: 184 LIVVSRHGVRRQF------PSSTHDFSKYAPGK-TFETEDKDWGVDGSMGVL-----TQHGYDAAHLMGKFQGQKYAGDGLPLDSCSDMFVYCEEASRGGSGDRDMPRDEFTAEAFFKGFTEGWTAAGGDATVGSCPVPEPHFEEVEYLIDQGSKPRGDAGQCRLGSEQEVQGVVGKVD--EWTRLLRSKLQKLNDVLGCCDRSLCPADHPEDQPCTLMDMPHVWDEEHWYVTFTGPVYAGKYFSEWFLLNYLNGMDVAWGELSEEDVMDLAAFVTEYRHFEFDLLAARPFGSALLMHVVAALDQMETGENLDA-------VAHTPDVKLVYYAAHDTNLLYLAELLDLKWVSKGWQPNHTPPGGELVFEAYM------VDGELNVAAFFDIATPSQIRELTDLTPSNPPGRVAITIPGCSQGEELL-------CPLSKLRALAIRSVDAECITPPELVEYVSD--------SWAKDAVVLQA 1506
++VVSRHG+R + P+ + +Y+ K F + +WG L T+HG MGK+ G + L CSD F Y + R D TA+ F GF SC P + L +QG + C SE GVVG V R+ + +++ +ND++GCC+ LC D C L +P W + +Y + + ++ SEWFLL LN M + L+ +D++ L + + A FGS LL+H+VA++ Q G + + + K ++YA HD NLLYL +LL L+W + W PN G LVFE + ++ + V A+F ATP+QIR L+ NPP RV ++IP CS L C + + A ++ C++P L +Y +W+ VV+ A
Sbjct: 19 VLVVSRHGIRGPYGPDGLEPTEVN-MQRYSKLKYPFPVKGTEWGTSEDEAELVSPKITKHGTHVIQNMGKYFGA-HLYPTLANIQCSDAFAYADNNER----------DIVTAQQFLSGFLP------------SCTSLVPTTNDTRLLFEQG---QDSTAICPATSESIYSGVVGDVTTANLVRIYKPEIKAINDLVGCCEPVLC--DLNSTASCDLFGVPSRWSGK-FYEPWQDTLSEAQFLSEWFLLQSLNNMTIP-PPLTLDDIVQLGVLHKVHMDLITNQFNAENFGSTLLVHIVASMQQAIQGSPIPIPPGAGPHLLQSLTNKFLFYAGHDINLLYLRDLLRLEWETAHWLPNQPNVGSMLVFELHSYVNNSALESDYYVEAYFVTATPNQIRNAETLSSQNPPDRVLVSIPHCSHDVVLADGKVATRCNYTNFKEAARLAIRQACVSPT-LAKYAKSMPSGPRETAWSFKVVVVAA 469 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1118.789.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1118.789.1 >prot_E-siliculosus-1a_F_contig1118.789.1 ID=prot_E-siliculosus-1a_F_contig1118.789.1|Name=mRNA_E-siliculosus-1a_F_contig1118.789.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=573bp PAPAITRTSNSLSVIGSRACCAAMPSNKHAACSHALKPPLKPLVLAAVMMback to top mRNA from alignment at E-siliculosus-1a_F_contig1118:14478..23533- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1118.789.1 ID=mRNA_E-siliculosus-1a_F_contig1118.789.1|Name=mRNA_E-siliculosus-1a_F_contig1118.789.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=9056bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1118:14478..23533- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1118:14478..23533- >mRNA_E-siliculosus-1a_F_contig1118.789.1 ID=mRNA_E-siliculosus-1a_F_contig1118.789.1|Name=mRNA_E-siliculosus-1a_F_contig1118.789.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3438bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1118:14478..23533- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |