mRNA_E-siliculosus-1a_F_contig1110.749.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1110.749.1
Unique NamemRNA_E-siliculosus-1a_F_contig1110.749.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1110.749.1 vs. uniprot
Match: D7G8F8_ECTSI (RPAP3_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8F8_ECTSI)

HSP 1 Score: 1326 bits (3433), Expect = 0.000e+0
Identity = 733/770 (95.19%), Postives = 741/770 (96.23%), Query Frame = 2 
Query:   56 MTGKGGHDAYGKDGPGAAAFRVQHQIRQNAQDMQEYLTDLSSWEKSIKKKDKQLSRKAMSESSSSGNRRAIPDTGTPPIRPAGSTVPVSSGPAPQPSPPTQKLSAKSLGCRNDGADGRPHINVNA------TGDSGKAKSSMSAAGHTYDKGYGKWAKFDIDAALRSVDQEEE-GVNDKRRSSSXXXXXXXXXKNQGTPRLTPATMIDRSCSRGLRRPPPPKHTVAPTSTSRSSQSSRDLEKEERERGNTKFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPRHVKSLQRRAAARNALGKHRAALVDLQTAAEIGPTSKQVRKDLSKTLETLKTVVRRAPKTHVRVESFPLPAPKPRGYSQPGTPIEEGLPPTVTNAAVSATNHNASVTGDEDTAAPYSSVLQESTDKRATNEATVYSYQARTIVEELPDEAEATLATPIPIPRAPTNAVSSVQSASLPTASIAVAAQNERGGDAVPRSYGREDRDITVDPAEDTPKIATVEGSLTKTTTPGAATPSEATDVAAAHTVRPAVSTDLASKTGPPALSLVGVGAKEVTEKASPGGEGNNLSRGAHPAVKEEATCPSLEARTEDKELCAPTRTPQQGGPSTPAPACRAMAHALQLPTTGYQFESMWRGTDGSPEGRLELLRAVPPSTIAKIFRRTPIEVELLGGVLQELGKAFLPRRPATALRWLKNLSKASRFSMTVALLGEEDGRAAAREVLRRLEAAPPTKVDPKDVDVLRKQFSC 2344
            MTGKG HDAYGKDGPGAAAFRVQHQIR+NAQDMQEYLTDLSSWEKSIKKKDKQLSRKAMSESSSSGNRRAIPDTGTPPIRP GSTVPVSSGPAPQPS PTQKLSAKSLGCRNDGADGRPHINVNA      TGDSGKAKSSMSAAGHTYDKGYGKWAKFDIDAALRSVDQEEE GVNDKRRSS XXXXXXXXXKNQGTPRLTPATM+DRSCSRGLRRPPPPKHTVAPTSTSRSSQS RDLEKEERE+GNTKFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPRHVKSLQ+RAAARNALGKHRAAL DLQTAAEI PTSKQVRKDLSKTLETLKTVVRRAPKTHVRVESFPLPAPKPRGYSQPGTPIEEG+PPTV NAAVSATNHNASVTGDEDTAAPYSSVLQESTDKRATNEATVYSYQARTIVEELPDEAEATLATPIP PRAPTNAVSSVQS  LPTASIAVAAQNERGGDAVPRSYGR DRDITVDPA DTPKIATVEGSLTKTTTPGAATPSEATDVAAAHTVRPAVSTDLASKTGPPALSLV VGAK VTE+AS GGE NNLSRG HP VKEEATCPSLEARTEDKELCAPT+TPQQG PSTPAPACRA AHALQLPTTGYQFESMWRGTDGSPEGRLELLRAVPPSTIAKIFRRTPIEVELLGGVLQELGKAFLPRRPATALRWLK+LSKASRFSMTVALLGEEDGRAAAREVLRRLEAA PTKVDPKDVDVLRKQFSC
Sbjct:    1 MTGKGDHDAYGKDGPGAAAFRVQHQIRRNAQDMQEYLTDLSSWEKSIKKKDKQLSRKAMSESSSSGNRRAIPDTGTPPIRPPGSTVPVSSGPAPQPSQPTQKLSAKSLGCRNDGADGRPHINVNAANGGGATGDSGKAKSSMSAAGHTYDKGYGKWAKFDIDAALRSVDQEEEEGVNDKRRSSXXXXXXXXXXKNQGTPRLTPATMVDRSCSRGLRRPPPPKHTVAPTSTSRSSQSPRDLEKEEREKGNTKFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPRHVKSLQQRAAARNALGKHRAALGDLQTAAEIDPTSKQVRKDLSKTLETLKTVVRRAPKTHVRVESFPLPAPKPRGYSQPGTPIEEGVPPTVANAAVSATNHNASVTGDEDTAAPYSSVLQESTDKRATNEATVYSYQARTIVEELPDEAEATLATPIPTPRAPTNAVSSVQSVPLPTASIAVAAQNERGGDAVPRSYGRVDRDITVDPAGDTPKIATVEGSLTKTTTPGAATPSEATDVAAAHTVRPAVSTDLASKTGPPALSLVDVGAKAVTEQASAGGEDNNLSRGTHP-VKEEATCPSLEARTEDKELCAPTQTPQQGRPSTPAPACRATAHALQLPTTGYQFESMWRGTDGSPEGRLELLRAVPPSTIAKIFRRTPIEVELLGGVLQELGKAFLPRRPATALRWLKSLSKASRFSMTVALLGEEDGRAAAREVLRRLEAASPTKVDPKDVDVLRKQFSC 769
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BLAST of mRNA_E-siliculosus-1a_F_contig1110.749.1 vs. uniprot
Match: A0A6A4EVA2_9STRA (RPAP3_C domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4EVA2_9STRA)

HSP 1 Score: 171 bits (433), Expect = 9.830e-42
Identity = 129/337 (38.28%), Postives = 175/337 (51.93%), Query Frame = 2 
Query:  119 VQHQIRQNAQDMQEYLTDLSSWEKSIKKKDKQLSRKAMSESSSSGNRRAIPDTGTPPIRPAGSTVPVSSGPAPQPSPPTQKLSAKSLGCRNDGADGRPHINVNATGDSGKAKSSMSAAGHTYDKGYGKWAKFDIDAALRSVDQEEEGVNDKRRSSSXXXXXXXXXKNQGTPRLTPATMIDRSCSRGLRRPPPPKHTVAPTSTSRSSQSSRDLEKEERERGNTKFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPRHVKSLQRRAAARNALGKHRAALVDLQTAAEIGPTSKQVRKDLSKTLETLKTVVRRAPK 1129
            VQHQIR NA  +Q+Y +DL +WEKSI K+D             S  +RA   T  P    AG+T            PP +      +G  N+ ADG     VN     GK   S     HTYDKGY +W KFD+DAAL+  D++    + K +S +                           S  L+  P P+  VA      +S S++  E+ E+E GN  + +GD+  A+KSYTRCLG N ++++  SNRAMA LK +EF  AE D   AL+ DP HVKS  RR  ARN+LGKHR AL+D Q AA + P S+Q++  +  T E ++T ++RAPK
Sbjct:   14 VQHQIRANASQLQDYFSDLYAWEKSIGKED-------------SARKRAAKTTKKPAT--AGAT------------PPPRGARGNGVGRNNEAADG-----VN-----GKKPDS-----HTYDKGYNRWEKFDVDAALKEADED---ASTKTKSGA--------------------------ASPPLQSSPVPRRVVA------ASPSTKSREELEKEGGNAHYKRGDYVAAIKSYTRCLGYNPQNAVVLSNRAMAYLKNREFANAEDDCTLALKADPLHVKSYSRRGTARNSLGKHRLALLDFQQAATLDPKSRQIQTQVQSTRELIRTAIKRAPK 273
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BLAST of mRNA_E-siliculosus-1a_F_contig1110.749.1 vs. uniprot
Match: K3WL17_GLOUD (RPAP3_C domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WL17_GLOUD)

HSP 1 Score: 171 bits (433), Expect = 1.160e-41
Identity = 135/355 (38.03%), Postives = 188/355 (52.96%), Query Frame = 2 
Query:   95 GPGAAAFRVQHQIRQNAQDMQEYLTDLSSWEKSIKKKDKQLSRKAMSESSSSGNRRAIPDTGTPPIRPAGSTVPVSSGPAPQPSPPTQKLSAKSLGCRNDGADGRPHINVNATGDSGKAKSSMSAA---GHTYDKGYGKWAKFDIDAALRSVDQEEEGVNDKRRSSSXXXXXXXXXKNQGTPRLTPATMIDRSCSRGLRRPPPPKHTVAPTSTSRSSQSSRDLEKEERERGNTKFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPRHVKSLQRRAAARNALGKHRAALVDLQTAAEIGPTSKQVRKDLSKTLETLKTVVRRAPK-THVRVE 1147
            G  A+  +VQHQIR NA  +Q+Y +DL SWEKSI +++                 RA                            P +++            D  P   V   GDS   K + + A   GHTYDKGY KWAKFD+DAALR  D++         S+SXXXXXXXXX        + A +++ +          P    + T+ SR        E+ ERE GN  + +GD+  A+K YTRCLG N  +++  SNRAMA+LK +EFGKAE D + AL++DP H+KSL RR  ARN+LGKHR AL+D + AAE+ P S+Q++  ++ T E ++T ++RAPK T  ++E
Sbjct:    5 GASASTLQVQHQIRANAAQLQDYFSDLYSWEKSINEEEXXXXXXXXXXXXXXXXXRA----------------------------PRRRV--------QQATDATP---VEGDGDSANDKGAAAKADPAGHTYDKGYSKWAKFDVDAALREADED---------STSXXXXXXXXXXXXXXXLSSKAVVVEET---------EPAAKASATTKSR--------EELEREDGNAHYQRGDYVAAIKCYTRCLGYNPHNAVVLSNRAMAHLKNREFGKAEEDCNLALKIDPSHLKSLSRRGTARNSLGKHRLALLDFERAAELDPKSRQIQTQIASTRELIRTAIKRAPKRTQFKIE 294
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BLAST of mRNA_E-siliculosus-1a_F_contig1110.749.1 vs. uniprot
Match: A0A081B1U1_PHYPR (Uncharacterized protein n=1 Tax=Phytophthora parasitica P1976 TaxID=1317066 RepID=A0A081B1U1_PHYPR)

HSP 1 Score: 161 bits (408), Expect = 1.780e-39
Identity = 117/341 (34.31%), Postives = 164/341 (48.09%), Query Frame = 2 
Query:  107 AAFRVQHQIRQNAQDMQEYLTDLSSWEKSIKKKDKQLSRKAMSESSSSGNRRAIPDTGTPPIRPAGSTVPVSSGPAPQPSPPTQKLSAKSLGCRNDGADGRPHINVNATGDSGKAKSSMSAAGHTYDKGYGKWAKFDIDAALRSVDQEEEGVNDKRRSSSXXXXXXXXXKNQGTPRLTPATMIDRSCSRGLRRPPPPKHTVAPTSTSRSSQSSRDLEKEERERGNTKFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPRHVKSLQRRAAARNALGKHRAALVDLQTAAEIGPTSKQVRKDLSKTLETLKTVVRRAPK 1129
            +   VQHQIR NA  +Q+Y +DL +WEK+I K+D    R A +  S +      P T T                                            I V++ G+     +      HTYDKGY +W KFD+DAAL+  D++E      ++ S+            G  R+T  + I                  A T+T    ++  +LEKEE   GN  + +GD+  A+KSYTRCLG N ++++  SNRAMA LK +EF  AE D   AL+ DP HVKS  RR  ARNALGKHR AL+D   AA + P S+Q++  L  T   ++T ++R+PK
Sbjct:    8 SVVEVQHQIRANASQLQDYFSDLYAWEKTIHKEDSARKRAAKTAKSPTAIAAPPPRTAT-------------------------------------------IIGVDSNGEKVSTANEKKLDAHTYDKGYKRWEKFDVDAALKEADEDEGNKRQNKQQSASVQA-----SGTGPSRVTATSNIP----------------AASTTT----KTREELEKEE---GNAHYKRGDYVAAIKSYTRCLGYNPQNAVVLSNRAMAYLKNREFANAEDDCTLALKSDPAHVKSYSRRGTARNALGKHRLALLDFHRAAMLDPKSRQIQTQLQSTRNVIRTAIKRSPK 277
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BLAST of mRNA_E-siliculosus-1a_F_contig1110.749.1 vs. uniprot
Match: A0A329RPX3_9STRA (RPAP3_C domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RPX3_9STRA)

HSP 1 Score: 164 bits (416), Expect = 2.430e-39
Identity = 123/347 (35.45%), Postives = 178/347 (51.30%), Query Frame = 2 
Query:   89 KDGPGAAAFRVQHQIRQNAQDMQEYLTDLSSWEKSIKKKDKQLSRKAMSESSSSGNRRAIPDTGTPPIRPAGSTVPVSSGPAPQPSPPTQKLSAKSLGCRNDGADGRPHINVNATGDSGKAKSSMSAAGHTYDKGYGKWAKFDIDAALRSVDQEEEGVNDKRRSSSXXXXXXXXXKNQGTPRLTPATMIDRSCSRGLRRPPPPKHTVAPTSTSRSSQSSRDLEKEERERGNTKFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPRHVKSLQRRAAARNALGKHRAALVDLQTAAEIGPTSKQVRKDLSKTLETLKTVVRRAPK 1129
            K+   ++   VQHQIR NA  +Q+Y +DL +WE +I K++             S  +RA         + A S+V  ++ P P+ +                       + V + G+   A +      HTYDKGY +W KFD+DAAL+  D EE G+  K   +S         ++ G+  L  AT                    +  STS +++S  +LEKEE   GN  + +GD+  A+KSYTRCLG N ++++  SNRAMA LK +EF  AE D   AL+ DP HVKS  RR  ARN+LGKHR AL+D Q AA + P S+Q++  L  T E ++T ++R+PK
Sbjct:   22 KEDKTSSVVEVQHQIRANASQLQDYFSDLYAWEMTIDKEN-------------SARKRAT--------KTAKSSVAANAAPPPRVA---------------------TIVGVGSNGEELYAGNEKKLDEHTYDKGYKRWDKFDVDAALKEAD-EEAGIRQKSEQASASASE----QSSGSAPLRVAT-------------------TSKASTSSTTKSREELEKEE---GNAHYKRGDYVAAIKSYTRCLGYNPQNAVVLSNRAMAYLKNREFANAEDDCTLALKADPTHVKSYSRRGTARNSLGKHRLALLDFQHAATLDPKSRQIQTQLQSTRELIRTAIKRSPK 299
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BLAST of mRNA_E-siliculosus-1a_F_contig1110.749.1 vs. uniprot
Match: D0MU02_PHYIT (RNA polymerase II-associated protein, putative n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MU02_PHYIT)

HSP 1 Score: 161 bits (408), Expect = 9.730e-39
Identity = 120/340 (35.29%), Postives = 171/340 (50.29%), Query Frame = 2 
Query:  119 VQHQIRQNAQDMQEYLTDLSSWEKSIKKKDKQLSRKAMSESSSSGNRRAIPDTGTPPIRPAGSTVPVSSGPAPQPSPPTQKLSAKSLGCRNDGADGRPHINVNATGDSGKAKSSMSAAGHTYDKGYGKWAKFDIDAALRSVDQEEEGVNDKRRSSSXXXXXXXXXKNQGTPRLTPATMIDRSCSRGLRRPPPPKHTVAPTS---TSRSSQSSRDLEKEERERGNTKFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPRHVKSLQRRAAARNALGKHRAALVDLQTAAEIGPTSKQVRKDLSKTLETLKTVVRRAPK 1129
            +QHQIR NA  +Q+Y +DL +WEKSI K+D    R   +  SS+          TPP  P                PP    +                + V ++ ++ +  S      HTYDKGY +W KFD+D AL+  D+E +                   KN+      P+ ++  S S             APT+   TS SS +++  E+ E+E GN  + +GD+  A+KSYTRCLG N ++++  SNRAMA LK +E+  AE D   ALR DP H KS  RR  ARN+LGKHR AL+D Q AA + P S+Q++K L  T E ++T ++R+ K
Sbjct:    7 MQHQIRANASQLQDYFSDLYAWEKSIDKEDSMRKRATKTAKSSA----------TPPAAP----------------PPRVATT----------------VGVGSSDENARTVSLKKLDAHTYDKGYKRWEKFDVDTALKEADEEGD----------------CKQKNK-----QPSALVQPSGS-------------APTAMAKTSVSSTTTKSREELEKEEGNAHYKRGDYVAAIKSYTRCLGYNPQNAVVLSNRAMAYLKNREYANAEDDCSLALRADPAHAKSCTRRGTARNSLGKHRLALLDFQRAATLDPKSRQIQKQLQSTRELIRTAIKRSSK 270
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BLAST of mRNA_E-siliculosus-1a_F_contig1110.749.1 vs. uniprot
Match: W2RGZ7_PHYPN (RPAP3_C domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2RGZ7_PHYPN)

HSP 1 Score: 161 bits (408), Expect = 1.810e-38
Identity = 117/341 (34.31%), Postives = 164/341 (48.09%), Query Frame = 2 
Query:  107 AAFRVQHQIRQNAQDMQEYLTDLSSWEKSIKKKDKQLSRKAMSESSSSGNRRAIPDTGTPPIRPAGSTVPVSSGPAPQPSPPTQKLSAKSLGCRNDGADGRPHINVNATGDSGKAKSSMSAAGHTYDKGYGKWAKFDIDAALRSVDQEEEGVNDKRRSSSXXXXXXXXXKNQGTPRLTPATMIDRSCSRGLRRPPPPKHTVAPTSTSRSSQSSRDLEKEERERGNTKFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPRHVKSLQRRAAARNALGKHRAALVDLQTAAEIGPTSKQVRKDLSKTLETLKTVVRRAPK 1129
            +   VQHQIR NA  +Q+Y +DL +WEK+I K+D    R A +  S +      P T T                                            I V++ G+     +      HTYDKGY +W KFD+DAAL+  D++E      ++ S+            G  R+T  + I                  A T+T    ++  +LEKEE   GN  + +GD+  A+KSYTRCLG N ++++  SNRAMA LK +EF  AE D   AL+ DP HVKS  RR  ARNALGKHR AL+D   AA + P S+Q++  L  T   ++T ++R+PK
Sbjct:    8 SVVEVQHQIRANASQLQDYFSDLYAWEKAIHKEDSARKRAAKTAKSPTAIAAPPPRTAT-------------------------------------------IIGVDSNGEKVSTANEKKLDAHTYDKGYKRWEKFDVDAALKEADEDEGNKRQNKQQSASVQA-----SGTGPSRVTATSNIP----------------AASTTT----KTREELEKEE---GNAHYKRGDYVAAIKSYTRCLGYNPQNAVVLSNRAMAYLKNREFANAEDDCTLALKSDPAHVKSYSRRGTARNALGKHRLALLDFHRAAMLDPKSRQIQTQLQSTRNVIRTAIKRSPK 277
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BLAST of mRNA_E-siliculosus-1a_F_contig1110.749.1 vs. uniprot
Match: A0A8K1FBG6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FBG6_PYTOL)

HSP 1 Score: 157 bits (398), Expect = 2.630e-37
Identity = 123/342 (35.96%), Postives = 175/342 (51.17%), Query Frame = 2 
Query:  107 AAFRVQHQIRQNAQDMQEYLTDLSSWEKSIKKKDKQLSRKAMSESSSSGNRRAIPDTGTPPIRPAGSTVPVSSGPAPQPSPPTQKLSAKSLGCRNDGADGRPHINVNATGDSGKAKSSMSAAGHTYDKGYGKWAKFDIDAALRSVDQEEEGVNDKRRSSSXXXXXXXXXKNQGTPRLTPATMIDRSCSRGLRRPPPPKHTVA-PTSTSRSSQSSRDLEKEERERGNTKFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPRHVKSLQRRAAARNALGKHRAALVDLQTAAEIGPTSKQVRKDLSKTLETLKTVVRRAPK 1129
            +  +VQ QIR NA ++Q+Y +DL +WEK+I+KK++     AM++ +                      VP+  G         QK +  SL   +      P       G + KA +      HTYDKGY KW KFD+DAAL+  D +                     + Q     T  T +            P K  VA P   S  ++S  D+E+EE   GN  + +GD+  A+KSYTRCLG NS++++  SNRAMA LK +E+ KAE+D   AL++D  HVKS  RR  ARNALGKHR AL+D + A E+ P SKQ+   ++ T E+++T ++RAPK
Sbjct:   16 SVLQVQQQIRANASELQDYFSDLYAWEKTIQKKEEATKSTAMTKQN----------------------VPLPRG---------QKTATVSLTPIS-----APEAIAPVEGPTKKADA------HTYDKGYKKWDKFDVDAALQEADGDHSA------------------EKQSAQAETTTTSL------------PTKKVVAKPKIGSVPTKSREDIEREE---GNEHYKRGDYVAAIKSYTRCLGFNSQNAIVLSNRAMAYLKNREYKKAENDCTLALKIDSAHVKSYSRRGTARNALGKHRLALLDFERARELDPKSKQLLTQIASTKESMRTAIKRAPK 282
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BLAST of mRNA_E-siliculosus-1a_F_contig1110.749.1 vs. uniprot
Match: A0A5D6XFC9_9STRA (RPAP3_C domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XFC9_9STRA)

HSP 1 Score: 151 bits (382), Expect = 3.000e-35
Identity = 112/340 (32.94%), Postives = 158/340 (46.47%), Query Frame = 2 
Query:  107 AAFRVQHQIRQNAQDMQEYLTDLSSWEKSIKKKDKQLSRKAMSESSSSGNRRAIPDTGTPPIRPAGSTVPVSSGPAPQPSPPTQKLSAKSLGCRNDGADGRPHINVNATGDSGKAKSSMSAAGHTYDKGYGKWAKFDIDAALRSVDQEEEGVNDKRRSSSXXXXXXXXXKNQGTPRLTPATMIDRSCSRGLRRPPPPKHTVAPTSTSRSSQSSRDLEKEERERGNTKFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPRHVKSLQRRAAARNALGKHRAALVDLQTAAEIGPTSKQVRKDLSKTLETLKTVVRRAP 1126
            AA   QHQIR NA ++Q+Y +DL SWEK++++ ++   +   +   S+G   A                PV S P P                                            A HTYD+GY KWAKFD++AAL+  D++                                                 K  VA +S+          E+ ERE GN  + +GDF  A+K YTRCLG +S++++  SNRAMA LK +EF KAE D + A++VDP H+KSL RRA ARNALGKHR AL+D + AA + P S+Q++  ++ T E L+  ++RAP
Sbjct:    8 AALETQHQIRANAAELQDYFSDLYSWEKTVERDEEARRQAKAARQPSAGGATAA--------------APVRSAPTP--------------------------------------------AAHTYDRGYYKWAKFDVEAALKEADEDGHVT---------------------------------------------KSAVAASSS---------REEIEREEGNAHYKRGDFVAAIKCYTRCLGYDSRNAVVLSNRAMAYLKNREFAKAEDDCNLAIQVDPSHLKSLSRRATARNALGKHRLALLDFERAAALDPKSRQLQNQIASTKELLRAAIKRAP 235
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1110.749.1 vs. uniprot
Match: A0A3L6VAV2_9STRA (RPAP3_C domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VAV2_9STRA)

HSP 1 Score: 148 bits (373), Expect = 3.680e-35
Identity = 118/320 (36.88%), Postives = 163/320 (50.94%), Query Frame = 2 
Query:  110 AFRVQHQIRQNAQDMQEYLTDLSSWEKSIKKKDKQLSRKAMSESSSSGNRRAIPDTGTPPIRPAGSTVPVSSGPAPQPSPPTQKLSAKSLGCRNDGADGRPHIN--VNATGDSGKAKSSMSAAGHTYDKGYGKWAKFDIDAALRSVDQEEEGVNDKRRSSSXXXXXXXXXKNQGTPRLTPATMIDRSCSRGLRRPPPPKHTVAPTSTSRSSQSSRDLEKEERERGNTKFGQGDFEGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPRHVKSLQRRAAARNALGKHRAALVDLQTAAEIGPTSK 1063
            +  VQ QIR+NA  +Q+Y  D+SSWEKS+ KK++QL           G++R+                            P ++  A S+     G+DG   I   +NAT D+   K + + + H YDKGY KW  FD+DAAL+ VD           + S           +  P    +T   ++ +   ++P PP   V            RDL   E+E GN  F QG+F  AV  Y+R L  N ++ +  SNRAMA+LKL++FGKAE+D  AAL VD  HVKSL RRA+ARNALGKH AA  DL++A ++  TSK
Sbjct:    3 SLAVQRQIRENASYLQDYFADMSSWEKSMAKKEQQLQ----------GSKRSAA--------------------------PVRRAVAMSV----RGSDGSVSIQHPLNATIDT-PTKPTKAPSHHVYDKGYKKWDSFDVDAALKEVD-----------TPSVTPHQDEEDPEEAPPARPTSTRPKKAVTVTPKKPSPPPVNVP-----------RDLL--EKEDGNMHFKQGEFAAAVNCYSRSLSYNPRNPIVLSNRAMAHLKLQQFGKAEADCTAALAVDGGHVKSLVRRASARNALGKHHAAFADLESALKLDSTSK 257
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1110.749.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8F8_ECTSI0.000e+095.19RPAP3_C domain-containing protein n=2 Tax=Ectocarp... [more]
A0A6A4EVA2_9STRA9.830e-4238.28RPAP3_C domain-containing protein n=4 Tax=Phytopht... [more]
K3WL17_GLOUD1.160e-4138.03RPAP3_C domain-containing protein n=1 Tax=Globispo... [more]
A0A081B1U1_PHYPR1.780e-3934.31Uncharacterized protein n=1 Tax=Phytophthora paras... [more]
A0A329RPX3_9STRA2.430e-3935.45RPAP3_C domain-containing protein n=2 Tax=Phytopht... [more]
D0MU02_PHYIT9.730e-3935.29RNA polymerase II-associated protein, putative n=1... [more]
W2RGZ7_PHYPN1.810e-3834.31RPAP3_C domain-containing protein n=11 Tax=Phytoph... [more]
A0A8K1FBG6_PYTOL2.630e-3735.96Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6XFC9_9STRA3.000e-3532.94RPAP3_C domain-containing protein n=1 Tax=Pythium ... [more]
A0A3L6VAV2_9STRA3.680e-3536.88RPAP3_C domain-containing protein n=4 Tax=Aphanomy... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1110contigE-siliculosus-1a_F_contig1110:5706..13328 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size2310
Model size3067
Exons6
Ec32 orthologEc-14_002880.1
Ec32 ortholog descriptionRNA-polymerase II-associated protein 3-like, C-terminal domain
Hectar predicted targeting categoryother localisation
BRITEko00000,ko03036
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.T
EggNOG OGsCOG0639@1,KOG0376@2759
EggNOG free text desc.response to arachidonic acid
KEGG koko:K19870
Seed eggNOG ortholog2880.D7G8F8
Seed ortholog evalue0.0
Seed ortholog score1352.4
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1110.749.1prot_E-siliculosus-1a_F_contig1110.749.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1110 6408..13273 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927616.6687102-UTR-E-siliculosus-1a_F_contig1110:5705..64071622927616.6687102-UTR-E-siliculosus-1a_F_contig1110:5705..6407Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1110 5706..6407 -
1696318611.6037161-UTR-E-siliculosus-1a_F_contig1110:5705..64071696318611.6037161-UTR-E-siliculosus-1a_F_contig1110:5705..6407Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1110 5706..6407 -
1622927616.7567449-UTR-E-siliculosus-1a_F_contig1110:13273..133281622927616.7567449-UTR-E-siliculosus-1a_F_contig1110:13273..13328Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1110 13274..13328 -
1696318611.6799967-UTR-E-siliculosus-1a_F_contig1110:13273..133281696318611.6799967-UTR-E-siliculosus-1a_F_contig1110:13273..13328Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1110 13274..13328 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927616.6796403-CDS-E-siliculosus-1a_F_contig1110:6407..77061622927616.6796403-CDS-E-siliculosus-1a_F_contig1110:6407..7706Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1110 6408..7706 -
1696318611.613997-CDS-E-siliculosus-1a_F_contig1110:6407..77061696318611.613997-CDS-E-siliculosus-1a_F_contig1110:6407..7706Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1110 6408..7706 -
1622927616.690424-CDS-E-siliculosus-1a_F_contig1110:8111..82821622927616.690424-CDS-E-siliculosus-1a_F_contig1110:8111..8282Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1110 8112..8282 -
1696318611.6222763-CDS-E-siliculosus-1a_F_contig1110:8111..82821696318611.6222763-CDS-E-siliculosus-1a_F_contig1110:8111..8282Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1110 8112..8282 -
1622927616.7036595-CDS-E-siliculosus-1a_F_contig1110:8973..90371622927616.7036595-CDS-E-siliculosus-1a_F_contig1110:8973..9037Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1110 8974..9037 -
1696318611.6357343-CDS-E-siliculosus-1a_F_contig1110:8973..90371696318611.6357343-CDS-E-siliculosus-1a_F_contig1110:8973..9037Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1110 8974..9037 -
1622927616.7155643-CDS-E-siliculosus-1a_F_contig1110:9568..98281622927616.7155643-CDS-E-siliculosus-1a_F_contig1110:9568..9828Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1110 9569..9828 -
1696318611.6465752-CDS-E-siliculosus-1a_F_contig1110:9568..98281696318611.6465752-CDS-E-siliculosus-1a_F_contig1110:9568..9828Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1110 9569..9828 -
1622927616.7291505-CDS-E-siliculosus-1a_F_contig1110:9953..103141622927616.7291505-CDS-E-siliculosus-1a_F_contig1110:9953..10314Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1110 9954..10314 -
1696318611.6564822-CDS-E-siliculosus-1a_F_contig1110:9953..103141696318611.6564822-CDS-E-siliculosus-1a_F_contig1110:9953..10314Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1110 9954..10314 -
1622927616.7433746-CDS-E-siliculosus-1a_F_contig1110:13118..132731622927616.7433746-CDS-E-siliculosus-1a_F_contig1110:13118..13273Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1110 13119..13273 -
1696318611.6695316-CDS-E-siliculosus-1a_F_contig1110:13118..132731696318611.6695316-CDS-E-siliculosus-1a_F_contig1110:13118..13273Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1110 13119..13273 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1110.749.1

>prot_E-siliculosus-1a_F_contig1110.749.1 ID=prot_E-siliculosus-1a_F_contig1110.749.1|Name=mRNA_E-siliculosus-1a_F_contig1110.749.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=770bp
MTGKGGHDAYGKDGPGAAAFRVQHQIRQNAQDMQEYLTDLSSWEKSIKKK
DKQLSRKAMSESSSSGNRRAIPDTGTPPIRPAGSTVPVSSGPAPQPSPPT
QKLSAKSLGCRNDGADGRPHINVNATGDSGKAKSSMSAAGHTYDKGYGKW
AKFDIDAALRSVDQEEEGVNDKRRSSSNSDSDTDSDKNQGTPRLTPATMI
DRSCSRGLRRPPPPKHTVAPTSTSRSSQSSRDLEKEERERGNTKFGQGDF
EGAVKSYTRCLGMNSKSSLAFSNRAMANLKLKEFGKAESDADAALRVDPR
HVKSLQRRAAARNALGKHRAALVDLQTAAEIGPTSKQVRKDLSKTLETLK
TVVRRAPKTHVRVESFPLPAPKPRGYSQPGTPIEEGLPPTVTNAAVSATN
HNASVTGDEDTAAPYSSVLQESTDKRATNEATVYSYQARTIVEELPDEAE
ATLATPIPIPRAPTNAVSSVQSASLPTASIAVAAQNERGGDAVPRSYGRE
DRDITVDPAEDTPKIATVEGSLTKTTTPGAATPSEATDVAAAHTVRPAVS
TDLASKTGPPALSLVGVGAKEVTEKASPGGEGNNLSRGAHPAVKEEATCP
SLEARTEDKELCAPTRTPQQGGPSTPAPACRAMAHALQLPTTGYQFESMW
RGTDGSPEGRLELLRAVPPSTIAKIFRRTPIEVELLGGVLQELGKAFLPR
RPATALRWLKNLSKASRFSMTVALLGEEDGRAAAREVLRRLEAAPPTKVD
PKDVDVLRKQFSCWKRVVQ*
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mRNA from alignment at E-siliculosus-1a_F_contig1110:5706..13328-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1110.749.1 ID=mRNA_E-siliculosus-1a_F_contig1110.749.1|Name=mRNA_E-siliculosus-1a_F_contig1110.749.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=7623bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1110:5706..13328- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
TGGGTATTGTGGTGTCTGAGCCTGTCTGCGTAGCAAACTAGCTGTCAGTG
CCAGGATGACCGGGAAAGGAGGCCATGACGCGTATGGTAAGGATGGACCC
GGTGCGGCTGCCTTTCGTGTCCAGCATCAGATACGGCAAAATGCTCAGGA
CATGCAAGAGTATCTTACCGACCTCAGCAGCTGGGAGAAGTCCATAAAGA
AGAAGGACAAGTGAGTGGGGACCTGTGCTCGAACGTTGCGTTTGTCAATC
TCACCCCCTGGTCTGTGCTGAAAGCCGGTTAATTACAATCCGATTCGTGC
TCTACCAACGGTGGTAAGAATGATTGACAAAAAGGGCGGTCGTTTCATGG
CCGGGGAATACTATAGCGCCGAACGTGCTACTATGTACATTGTATATCAA
CCAAGATTTTGAATCTAGCCCCCAAGCCCGCTGACCACAGCAGCTCAAAG
TGTAGGTTGTAGGTTGTACAAAAATAGGATCAGTACTACAGCCACACAGC
AGTGATGGCGCGTTCGGGCGCATTTCCAGTAAACAACGAGCTCAGTGGCC
CCAAAAATCTTATAAGAAAGCATGGAGCCTTTATATCTTCCGCAGCACCC
CCGTACTTGTTTGCCTCTTCAGATGAGATTTACCCGCCGACTTTCGTTCC
CTCTCTCGCTTCCATCGAATGCCGGCCGGTCGGCTGAGTGTACTCTCTGA
TACCAATCCGGAAGTTTAACCTTGCGTCTGTTGAATATCACCTCCGCTGT
AGGTGTGCTGGCGGTATCTACCGCTTAGTACAAAGCCGAACAGAGTCCCC
CGAAGTCGATGTTTTTCCAACGCCCTGCTGTTTGGATTTGTCAATACAGG
CATTCGTGGTTCCGTTATTAGACAGAGTGGGCAGCAAAAAAAGCCACCGG
GACAGATTTAACTTAGCGTCCGCCAATCAGCTGTCTCCATTTAACTTGGC
GCCTACTTGGCGTCTTGTCTATTTTCGAGTAATTTTGGCAATTACGCCGC
TTTTTCTTCTGCGCGCACCGCATTCGAACCGACCAGTTCAGAGACCGACA
CACATCAGGCGGGAGCCTGGGCGCTGCAACTGGCGCGTACCAGACGCCAA
CAGCAGCAGAGACCACTCTGGTTTCTGTGTGCACGAAGTTTCGCAATGTC
AATCCACACTGAGTGTCGATGACGAGAACGCAGCGGCACAGGCCAGAAGA
GCTATACAGCGAGGAGAGAGACCGCACAAACACACACGCACGCACGCACA
CACGCGCGAATATTTACGTCGAGCTACGCACAGCAGTAGTACCCACACCC
AGGGATCCATGCATGATTTTATATCATCTGCACGCCCGTCCTCTCGCCAG
AACTTCAAGCATCGTGATGATGATGCTCTGGCACCTCCTCCGCGTTGTTT
TTTTCGTTCTCTTGACTCCATCGATCGGTAGGTTCTTCGGAGTGAACACC
CCACCCAAAGCAATCGCCATCAATCATCCATCCCGACGCGTCGGTTTCTT
GACAACCCGCATGGTAAAATAAATGTACTGCTGTGATTTCTTTGCTGCCC
CGGTGACGGCACCTCTGCTCTGGTGTCTCCTTTCCTTCATTGATTCATTG
AGTGAGGTGCAACATTTTGAAGCGTGTGGCCCGCAGATGAATGGGTTTCG
CCGTGTATTGGCGGGCTTCGCCCGCGTTATTAAACTCCTGAAAGCTCTGT
CCCGGTGCGATCAAAATTTGCCGAGTGTACCGAGAAGAGGGGGTTCCGTT
ATAAAAGAGGGTCGGTGTACCTTAAATAGTGACCGGCCCCTTTATAGTGG
ACTGGCCCCACTATTAAGGGGCTAGTCAGTTCAGGTGCACCTGTGTGTGG
CTCGCTCGGCTCCTTAACACACGCACACACACATTGCGGCGCCAACCACA
CCGGTAGCAGCATACGCGCGATATGCCATGCGCGGCTGGTGTTGTACCCC
GGACGTCACGATTAAATGTTTTCCGACGCACTTCTGTTTGGATTTGTCGG
TACTTCGAAGTATGATTGTATGTATTTTTCAAATCAAGGGTTCAGATTTA
GAGGGAAGCCCCGGTCTGTCTGAAACACGTTACTTAATCTGATAACCGTT
TTTGATATGGAAGAGTGACGTTGGAAATGGCTTTTTGAAGCTTGTCTCGC
TCTCGAAAATTCAGAAGTATCTCCCGTGCGTAGGCAGAGGCGCTAGACCC
ACCCTAGGCACACACAGCAAGGCAGGCATTTTCACCAGCCCTAGAGCTAC
AGATAGGAGCGTTTTGGACTACATAGCGCGCGCTCGACGCGCGTTTACAA
AGAAAGTCTGCAATTTGACAGACCATTTGGCCGTTGAACACAGCAACACC
GCAAGCAGCAAGGAATCGCAAACGCTGCTGTTCATGGGTAGACAGGCAGC
CACACAATGGGCACACATAGGTGCCCTTGCCGCAGCTTTTTTTTAATGCG
TGCCAAGAGTAAACGCATCTGCATGAAGTCTGTGCTCTGGATGTTTTGTG
TGTGAGGCATCAGGCTAAAACGCAAACTTTGTCGTGGCCTCGAGATGGTA
CGCGGGTGATTTTGGATTTGTCGGGTGTGCACAGCAGTTTTGGGATCGTA
GCGTCTGCCGTTGTCCAGCCATCAGAGACAATGTGGGCGTAAATTCCGTA
CAAACAGAGAGAGGCGCTCCTCCGGCATACATCTATTTTATGCATAGCAT
ATTTGGCTTCCAGGACTGGTCCCAAGCACGTTGCTTTCCATGTAGTTCTG
AAAGTATTGTTTTTAAGTTTGACAAGTCAAGCTCCGAGTATTTCATCTAC
TCCCTCCGACCAGCTACTGTGGCCATGAGGGACACCCCGAAAGGTGTTCT
TGCGCTGAACAGCTGTCGTGCTGCACTTCTGTAGGGAAACCTTGTATGAT
GAAACATCACCCGACGTTTCTTAACCTCTGTTCCTTACAAAGTACCGTTT
GCTGGCGGTATGAATGTCATGTACGTCTGATGTATGCTTTTGGCGAAATT
CTCTGAAAATGCAGGCAGCTTTCTCGAAAGGCTATGTCTGAATCGTCTTC
TTCGGGTAATCGACGAGCCATCCCCGACACCGGCACGCCCCCGATCCGCC
CCGCCGGAAGTACGGTCCCTGTAAGCTCTGGCCCTGCGCCCCAACCTTCA
CCACCAACGCAAAAGCTTTCGGCGAAGAGCCTGGGATGTCGAAACGATGG
GGCTGACGGTAGGCCGCACATCAACGTGAACGCGACGGGAGACTCGGGCA
AGGCCAAGTCTAGCATGTCGGCTGCAGGGCACACGTATGATAAGGGATAC
GGAAAATGGGCCAAGTTCGACATCGACGCCGCTCTTCGATCTGTTGATCA
GGAGGAGGAGGGAGTAAATGATAAGGTAGGGTGCCATGTTGACAGTGCAG
ACTTCTGTATAAGGTGTCGCGGCTGATTGTATGGGATCATTGGCATGTGC
GGCGTGCAACCTTGATATACCCCTTCGCTGCACACTCGCACAACAATCAG
AGACGCTCGAGCAGCAATAGCGATAGCGACACGGACAGCGACAAGAATCA
GGGGACTCCAAGGCTCACTCCGGCAACCATGATCGATCGGTCCTGCAGTC
GGGGCCTCCGTCGTCCTCCTCCGCCTAAGCACACTGTGGCACCAACCTCA
ACATCCCGATCAAGTCAGTCGTCGAGAGACTTGGAAAAGGAAGAGCGGGA
AAGAGGAAATACGAAGTTCGGCCAGGGTGACTTCGAGGGGGCTGTAAAGA
GCTATACGAGGTAGGCAGAATAGGGGGTGCGAGCGGGTGAGGTACGGTCT
CAAGCTCACCACATACCATGCACAACGATAAGTTGCAAATCGTGTTGATG
TATTTCACTCCTAGTATAAAACACACACTCAGAGTCTTGTTTTGGTCGCC
ACTGCAGCAGTCGTATGGCAAGGCAATGGGCCTGACTACGACACACTCCT
GCGGCTCAAGCACCAACTGTTCAGGAGTCAGAAATTTTGTTGGCGATTTT
GTTGTCATTAGACGTAGCAGGTGGATAGTGGAAATTTCTCCCTTCTTTCT
CGTTACTAACTTACAAATTTACGTTATTACCCGGAACATCACCTGCACAT
GTTAACAACGCACGACCACACGTTGTCATCCTTCCATGGCAGGACTACTC
ACGTTCCAGTAGGTTTCCAAAGATTAGGGCAATTCGAAACGCTTCGATGC
TGTGTCGCAGGAGTCGCGAGAGAGCACTTCGCGCGGTAGGCGTCTATATG
AATTTGCGATGCACCCGGCCTTCTCGACGCTGCTTGTCCAGGTGCCTGGG
CATGAACAGCAAGAGCTCGCTGGCTTTCTCGAACAGGGCTATGGCGAACC
TCAAGGTTTGTAAGCGGCCTAGAATGCAACGGGCTTTTATGCAAATGGTT
TTTGGCAGGAGTGAGTCAGTGCAGAACAGCGTTTGCGAAATCGTAAATAA
AATGCCGTTTACGGCTGTGGATTTGTTCTGTTTGCAGCTTTGCTTGTTGA
GCGTGCGTTTTTTCTGTCTCTCCGTGCCGATGTTTGGAAGCAGCTTGCAC
GATCCCAAGCGCAGAGGAGGAATTTCGCATACATGGCGCTTGTATTTCCA
CGATGTTGAAGCCTGTGCCCTCTGTAGTTTTCAAACCTGTCCCCGGTGGC
AGTTTGGCACTACCAACGTCAAGGAGCTGGAATCAATGTGATGTGTGCAC
TTTGACGTTCTGTGGCAAGCGCTTGTCTGCCATGTCCATCGCTGACACCA
CCACCTCCATCGCTGCCTCTACTACAATCTGTGAAATAAATGTGTGAAAT
AAATGAATCACCACAGCTGAAGGAGTTCGGGCTTGTATTTCCACGATGTT
GAAGCCTGTGCCCTCCGTAATTTTTAAACCTGTCCCCGGTGGCAGTTTGG
CACTACCAACGTCAAGGAGCTGGAATCAATGTGACGTGTGCACTTTGGCG
TTCTGTGGCAAGCGCTTGTCTGCCATGCCCATCGCTGACACCACCACCTC
CATCGCTGCCTCTACTACAATCTGTAAAATATATGAATCACCACAGCTGA
AGGAGTTCGGGAAGGCAGAATCCGATGCCGATGCGGCCTTGAGGGTGGAT
CCGCGCCACGTAAAATCTCTCCAGCGGCGAGCAGCGGCGAGGAATGCTCT
TGGGAAGCACCGTGCTGCGCTGGTTGACCTGCAAACAGCAGCGGAAATAG
GTCCAACCTCAAAGCAGGTGCGTACAGGAGGACTTTTGTTTGGGGCAAAG
GTCGATGCGTTGCAATGTTTATTTTGAATTGGGTGCCGAGAGGTGCACGT
CGGTTCCCCCTTCCAGGGAATGATTCGCCGTCGGTAGTGGACTTTTGACT
GCATTCTGGGGTGAACTAGGTTGTTGACTGCATTATTGCCATAGTGGGTT
CGCTGTTGGTAACAATGTCTGAGCGGTGGTGAGTTTGTTTTTAACCCGAG
GGTGGTTGAGTGCTGCGCACAACTGGTGTGGCGCTGTTTGTTTTTACCCC
AAGGGTGGTTGAGTGCTGCGCATAACCTCTGTGGCGCTGCAGCGTGTCGA
ATCTTGTCTTGTTGTTCCGCGCTGCGCATGTGCTCCAAAGTTGCCCTATT
GGCTTCACCTTCAAACGTGCAGGTTCGAAAAGACCTCAGCAAAACGCTGG
AAACTTTGAAGACAGTTGTGCGCCGTGCGCCGAAGACGCATGTTCGGGTG
GAGAGCTTCCCTCTCCCTGCCCCCAAGCCTCGTGGGTACTCTCAACCAGG
CACACCTATTGAAGAGGGTCTTCCACCCACCGTGACGAACGCTGCCGTAT
CCGCCACAAATCACAATGCTTCAGTGACCGGGGATGAGGACACAGCTGCG
CCGTATTCCTCAGTGTTGCAAGAGAGCACGGACAAGCGTGCCACCAATGA
GGCCACCGTCTACTCGTATCAGGCACGAACAATTGTCGAAGAGCTCCCTG
ATGAAGCGGAGGCCACCCTGGCTACTCCCATACCCATACCACGCGCACCC
ACCAACGCAGTATCGTCAGTGCAAAGTGCCTCGTTGCCAACGGCTTCGAT
CGCGGTGGCCGCTCAGAATGAGCGAGGAGGGGACGCCGTACCACGTTCTT
ACGGCAGGGAAGATCGGGATATTACGGTAGACCCAGCAGAAGATACACCA
AAGATTGCTACCGTAGAAGGCAGTTTAACCAAGACGACAACGCCAGGGGC
CGCAACACCATCAGAAGCGACCGACGTCGCTGCAGCGCACACAGTCCGTC
CGGCAGTCTCAACGGATTTGGCGTCGAAAACGGGCCCGCCCGCGCTCTCG
CTCGTGGGTGTTGGCGCGAAAGAGGTGACTGAGAAGGCAAGTCCCGGTGG
CGAGGGCAACAACCTGTCTCGAGGAGCTCATCCTGCTGTGAAAGAGGAGG
CAACCTGCCCGTCGCTTGAGGCGAGAACAGAAGACAAGGAGCTATGTGCA
CCGACCCGAACACCCCAGCAGGGTGGGCCGTCTACTCCCGCTCCCGCTTG
TAGGGCGATGGCCCACGCACTGCAGCTACCCACCACGGGCTACCAGTTTG
AAAGTATGTGGCGCGGCACAGATGGGTCGCCTGAAGGACGGCTTGAGCTG
CTGCGGGCCGTCCCGCCATCGACTATCGCCAAAATCTTCCGCCGAACCCC
TATCGAAGTAGAGTTGTTGGGCGGCGTTTTGCAAGAACTGGGAAAGGCTT
TTCTGCCCAGGAGGCCGGCAACGGCTCTGCGGTGGCTCAAGAACCTTTCT
AAAGCGTCTCGGTTCAGCATGACGGTGGCCCTTCTCGGCGAAGAGGACGG
TCGCGCAGCCGCGCGAGAAGTGCTAAGGCGACTTGAGGCAGCACCGCCGA
CGAAAGTGGACCCAAAAGATGTTGATGTCTTGAGGAAGCAGTTCTCGTGT
TGGAAGCGCGTGGTCCAATAGAATGTGGGTGGAGAGGTGACGAGGGAGTG
TGACGGAAGGGATGCATACCAAGACAGGTTCTAGTACTTTCAGGGGAGCC
GATTTCAGTAGGAATCTTGAAATTTTATTTTGGTGGGTGCAACACCTTTG
CGAGAGAAGATTGTTTTCACCTTTGGGTGCGTCGGAATGTGCCCACCCTG
TGCTTTTGAGCAGGCAGTACTATTGAGCACAAGCTGTTGGCAACACCAGA
AAAAGACATGTCGGCCAGAGTGAATCAGCCGAGGTTACCCGCCTCCTCCC
GTGTGTGTTGTTCGTATTACTTACGCCGTGGAACTGCTGTGGTTGTCACG
AGCGTCACGGTGAACGAGCAGATGTTCGAGTGCAGGACTACTCGTGCTTG
ATGATCATGCCGAGCTCCTCCCTTCGAGTGTTTCACGTCATTTGGGCATG
AGATGGCCTCAGAGGCTCCGGTATTTGATGACTGAAAATCCCTGATAGAA
TTTGTCAGAGACAAGGGTTGGCGGTTCGTATTGATTGAGTACGGTCCAGG
GTGGCACAATAACACGTCAATCATTTCGGGTCACGGATGAAGACTTTTCC
AGGCAAGGTGAATCATGTAAGAATGTTTTGAGCGGAGCCTCCCTGTTTAC
CCGGTTTAGAGATGCCGAACTTTGCACAAACAAGCTAGGAAGAGCACACG
CGAACGTTGTGCCGAGTGGCAAC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1110:5706..13328-

>mRNA_E-siliculosus-1a_F_contig1110.749.1 ID=mRNA_E-siliculosus-1a_F_contig1110.749.1|Name=mRNA_E-siliculosus-1a_F_contig1110.749.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=4620bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1110:5706..13328- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGACCGGGAAAGGAGGCCATGACGCGTATGGTAAGGATGGACCCGGTGC
GGCTGCCTTTCGTGTCCAGCATCAGATACGGCAAAATGCTCAGGACATGC
AAGAGTATCTTACCGACCTCAGCAGCTGGGAGAAGTCCATAAAGAAGAAG
GACAAATGACCGGGAAAGGAGGCCATGACGCGTATGGTAAGGATGGACCC
GGTGCGGCTGCCTTTCGTGTCCAGCATCAGATACGGCAAAATGCTCAGGA
CATGCAAGAGTATCTTACCGACCTCAGCAGCTGGGAGAAGTCCATAAAGA
AGAAGGACAAGCAGCTTTCTCGAAAGGCTATGTCTGAATCGTCTTCTTCG
GGTAATCGACGAGCCATCCCCGACACCGGCACGCCCCCGATCCGCCCCGC
CGGAAGTACGGTCCCTGTAAGCTCTGGCCCTGCGCCCCAACCTTCACCAC
CAACGCAAAAGCTTTCGGCGAAGAGCCTGGGATGTCGAAACGATGGGGCT
GACGGTAGGCCGCACATCAACGTGAACGCGACGGGAGACTCGGGCAAGGC
CAAGTCTAGCATGTCGGCTGCAGGGCACACGTATGATAAGGGATACGGAA
AATGGGCCAAGTTCGACATCGACGCCGCTCTTCGATCTGTTGATCAGGAG
GAGGAGGGAGTAAATGATAAGGCAGCTTTCTCGAAAGGCTATGTCTGAAT
CGTCTTCTTCGGGTAATCGACGAGCCATCCCCGACACCGGCACGCCCCCG
ATCCGCCCCGCCGGAAGTACGGTCCCTGTAAGCTCTGGCCCTGCGCCCCA
ACCTTCACCACCAACGCAAAAGCTTTCGGCGAAGAGCCTGGGATGTCGAA
ACGATGGGGCTGACGGTAGGCCGCACATCAACGTGAACGCGACGGGAGAC
TCGGGCAAGGCCAAGTCTAGCATGTCGGCTGCAGGGCACACGTATGATAA
GGGATACGGAAAATGGGCCAAGTTCGACATCGACGCCGCTCTTCGATCTG
TTGATCAGGAGGAGGAGGGAGTAAATGATAAGAGACGCTCGAGCAGCAAT
AGCGATAGCGACACGGACAGCGACAAGAATCAGGGGACTCCAAGGCTCAC
TCCGGCAACCATGATCGATCGGTCCTGCAGTCGGGGCCTCCGTCGTCCTC
CTCCGCCTAAGCACACTGTGGCACCAACCTCAACATCCCGATCAAGTCAG
TCGTCGAGAGACTTGGAAAAGGAAGAGCGGGAAAGAGGAAATACGAAGTT
CGGCCAGGGTGACTTCGAGGGGGCTGTAAAGAGCTATACGAGAGACGCTC
GAGCAGCAATAGCGATAGCGACACGGACAGCGACAAGAATCAGGGGACTC
CAAGGCTCACTCCGGCAACCATGATCGATCGGTCCTGCAGTCGGGGCCTC
CGTCGTCCTCCTCCGCCTAAGCACACTGTGGCACCAACCTCAACATCCCG
ATCAAGTCAGTCGTCGAGAGACTTGGAAAAGGAAGAGCGGGAAAGAGGAA
ATACGAAGTTCGGCCAGGGTGACTTCGAGGGGGCTGTAAAGAGCTATACG
AGGTGCCTGGGCATGAACAGCAAGAGCTCGCTGGCTTTCTCGAACAGGGC
TATGGCGAACCTCAAGGTGCCTGGGCATGAACAGCAAGAGCTCGCTGGCT
TTCTCGAACAGGGCTATGGCGAACCTCAAGCTGAAGGAGTTCGGGAAGGC
AGAATCCGATGCCGATGCGGCCTTGAGGGTGGATCCGCGCCACGTAAAAT
CTCTCCAGCGGCGAGCAGCGGCGAGGAATGCTCTTGGGAAGCACCGTGCT
GCGCTGGTTGACCTGCAAACAGCAGCGGAAATAGGTCCAACCTCAAAGCA
GCTGAAGGAGTTCGGGAAGGCAGAATCCGATGCCGATGCGGCCTTGAGGG
TGGATCCGCGCCACGTAAAATCTCTCCAGCGGCGAGCAGCGGCGAGGAAT
GCTCTTGGGAAGCACCGTGCTGCGCTGGTTGACCTGCAAACAGCAGCGGA
AATAGGTCCAACCTCAAAGCAGGTTCGAAAAGACCTCAGCAAAACGCTGG
AAACTTTGAAGACAGTTGTGCGCCGTGCGCCGAAGACGCATGTTCGGGTG
GAGAGCTTCCCTCTCCCTGCCCCCAAGCCTCGTGGGTACTCTCAACCAGG
CACACCTATTGAAGAGGGTCTTCCACCCACCGTGACGAACGCTGCCGTAT
CCGCCACAAATCACAATGCTTCAGTGACCGGGGATGAGGACACAGCTGCG
CCGTATTCCTCAGTGTTGCAAGAGAGCACGGACAAGCGTGCCACCAATGA
GGCCACCGTCTACTCGTATCAGGCACGAACAATTGTCGAAGAGCTCCCTG
ATGAAGCGGAGGCCACCCTGGCTACTCCCATACCCATACCACGCGCACCC
ACCAACGCAGTATCGTCAGTGCAAAGTGCCTCGTTGCCAACGGCTTCGAT
CGCGGTGGCCGCTCAGAATGAGCGAGGAGGGGACGCCGTACCACGTTCTT
ACGGCAGGGAAGATCGGGATATTACGGTAGACCCAGCAGAAGATACACCA
AAGATTGCTACCGTAGAAGGCAGTTTAACCAAGACGACAACGCCAGGGGC
CGCAACACCATCAGAAGCGACCGACGTCGCTGCAGCGCACACAGTCCGTC
CGGCAGTCTCAACGGATTTGGCGTCGAAAACGGGCCCGCCCGCGCTCTCG
CTCGTGGGTGTTGGCGCGAAAGAGGTGACTGAGAAGGCAAGTCCCGGTGG
CGAGGGCAACAACCTGTCTCGAGGAGCTCATCCTGCTGTGAAAGAGGAGG
CAACCTGCCCGTCGCTTGAGGCGAGAACAGAAGACAAGGAGCTATGTGCA
CCGACCCGAACACCCCAGCAGGGTGGGCCGTCTACTCCCGCTCCCGCTTG
TAGGGCGATGGCCCACGCACTGCAGCTACCCACCACGGGCTACCAGTTTG
AAAGTATGTGGCGCGGCACAGATGGGTCGCCTGAAGGACGGCTTGAGCTG
CTGCGGGCCGTCCCGCCATCGACTATCGCCAAAATCTTCCGCCGAACCCC
TATCGAAGTAGAGTTGTTGGGCGGCGTTTTGCAAGAACTGGGAAAGGCTT
TTCTGCCCAGGAGGCCGGCAACGGCTCTGCGGTGGCTCAAGAACCTTTCT
AAAGCGTCTCGGTTCAGCATGACGGTGGCCCTTCTCGGCGAAGAGGACGG
TCGCGCAGCCGCGCGAGAAGTGCTAAGGCGACTTGAGGCAGCACCGCCGA
CGAAAGTGGACCCAAAAGATGTTGATGTCTTGAGGAAGCAGTTCTCGTGT
TGGAAGCGCGTGGTCCAATAGGTTCGAAAAGACCTCAGCAAAACGCTGGA
AACTTTGAAGACAGTTGTGCGCCGTGCGCCGAAGACGCATGTTCGGGTGG
AGAGCTTCCCTCTCCCTGCCCCCAAGCCTCGTGGGTACTCTCAACCAGGC
ACACCTATTGAAGAGGGTCTTCCACCCACCGTGACGAACGCTGCCGTATC
CGCCACAAATCACAATGCTTCAGTGACCGGGGATGAGGACACAGCTGCGC
CGTATTCCTCAGTGTTGCAAGAGAGCACGGACAAGCGTGCCACCAATGAG
GCCACCGTCTACTCGTATCAGGCACGAACAATTGTCGAAGAGCTCCCTGA
TGAAGCGGAGGCCACCCTGGCTACTCCCATACCCATACCACGCGCACCCA
CCAACGCAGTATCGTCAGTGCAAAGTGCCTCGTTGCCAACGGCTTCGATC
GCGGTGGCCGCTCAGAATGAGCGAGGAGGGGACGCCGTACCACGTTCTTA
CGGCAGGGAAGATCGGGATATTACGGTAGACCCAGCAGAAGATACACCAA
AGATTGCTACCGTAGAAGGCAGTTTAACCAAGACGACAACGCCAGGGGCC
GCAACACCATCAGAAGCGACCGACGTCGCTGCAGCGCACACAGTCCGTCC
GGCAGTCTCAACGGATTTGGCGTCGAAAACGGGCCCGCCCGCGCTCTCGC
TCGTGGGTGTTGGCGCGAAAGAGGTGACTGAGAAGGCAAGTCCCGGTGGC
GAGGGCAACAACCTGTCTCGAGGAGCTCATCCTGCTGTGAAAGAGGAGGC
AACCTGCCCGTCGCTTGAGGCGAGAACAGAAGACAAGGAGCTATGTGCAC
CGACCCGAACACCCCAGCAGGGTGGGCCGTCTACTCCCGCTCCCGCTTGT
AGGGCGATGGCCCACGCACTGCAGCTACCCACCACGGGCTACCAGTTTGA
AAGTATGTGGCGCGGCACAGATGGGTCGCCTGAAGGACGGCTTGAGCTGC
TGCGGGCCGTCCCGCCATCGACTATCGCCAAAATCTTCCGCCGAACCCCT
ATCGAAGTAGAGTTGTTGGGCGGCGTTTTGCAAGAACTGGGAAAGGCTTT
TCTGCCCAGGAGGCCGGCAACGGCTCTGCGGTGGCTCAAGAACCTTTCTA
AAGCGTCTCGGTTCAGCATGACGGTGGCCCTTCTCGGCGAAGAGGACGGT
CGCGCAGCCGCGCGAGAAGTGCTAAGGCGACTTGAGGCAGCACCGCCGAC
GAAAGTGGACCCAAAAGATGTTGATGTCTTGAGGAAGCAGTTCTCGTGTT
GGAAGCGCGTGGTCCAATAG
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