mRNA_E-siliculosus-1a_F_contig1109.736.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1109.736.1
Unique NamemRNA_E-siliculosus-1a_F_contig1109.736.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1109.736.1 vs. uniprot
Match: D7FUX9_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUX9_ECTSI)

HSP 1 Score: 961 bits (2485), Expect = 0.000e+0
Identity = 501/524 (95.61%), Postives = 505/524 (96.37%), Query Frame = 1 
Query:  109 MVPVFDERWAKPGSTRVANDRDDADEAFARASPQSWMQEKLAMLQLRLEIDGDLTRFQPPQVFVVNIEDGALGSLLLTTTELFYSHQAILKSAGCFPNDLSMPLPCDVLRGSDFRISERYRCVADSKGQAQGGVGFIFEGLDMLDGSKVAVKFFHKSDDHAATTRTNMELITCLRLYHGLYSHCIDRRDNVDLCHLVRLHDVLVDAPIFEERNTNEGXXXXXXXX-RVAAGLSPSIFRATVMVFEWADGGDAHSLVREAGGGIPAADGARLFRQVLRGLRALHRRKLVHRDVKPENILLDDAGGFARLCDFGFAKHAPSVTPADLVGDPTTCYQAPERWQACRSPAAARAREKMAGETVVAVDNGEADAGEDQDEGXXXXXXXXXXRDDCASGVPQRDETTETLFASDVFSAGVTLFVLVSYHAILARLATEAPCRDVGEADASSLPALNVFQHAVGGDMFGLLQGGTRNGGVQGRLWAYWEVYGLSLPQALRGLLDGVLHPVPDRRFSMEQAFDWMDSHPEMY 1677
            MVP FDERWAKPGST VANDRDDADEAFARASPQSWMQEKL MLQLRLEIDGDLTRFQPPQVFVVNIEDGA+GSLLLTTTELFYSHQAILKSAGCFPNDLSMPLPCDVLRGSDFRISERYRCVAD KGQAQGGVGFIFEGLDMLDGSKVAVKFFHKSDDHAATTRTNMELITCLRLYHGLYSHCIDRRDNVDLCHLVRLHDVLVDAPIFEERN NEG  XXXXXX RVAAGLSPSIFRATV+VFEWADGGDAHSLVREAGGGIPAADGARLFRQVLRGLRALHRRK+VHRDVKPENILLDDAGGFARLCDFGFAKHAPSVTPADL GDPTTCYQAPERWQAC SP AARAREKMAGETVVA DNGE DAGE     XXXXXXXXXXRDDCASGVPQRDETTETLFASDVFSAGVTLFVLVSYHAILARLATEAPC+DVGEADASSLPALNVFQHAVGGDMFGLLQGGTRNGGVQGRLWAYWEVYGLSLPQALRGLLDGVLHPVP RRFSMEQAFDWMDSHPEMY
Sbjct:    1 MVPAFDERWAKPGSTVVANDRDDADEAFARASPQSWMQEKLGMLQLRLEIDGDLTRFQPPQVFVVNIEDGAVGSLLLTTTELFYSHQAILKSAGCFPNDLSMPLPCDVLRGSDFRISERYRCVADCKGQAQGGVGFIFEGLDMLDGSKVAVKFFHKSDDHAATTRTNMELITCLRLYHGLYSHCIDRRDNVDLCHLVRLHDVLVDAPIFEERNPNEGSGXXXXXXXRVAAGLSPSIFRATVIVFEWADGGDAHSLVREAGGGIPAADGARLFRQVLRGLRALHRRKIVHRDVKPENILLDDAGGFARLCDFGFAKHAPSVTPADLAGDPTTCYQAPERWQACGSPTAARAREKMAGETVVAGDNGEDDAGEXXX--XXXXXXXXXXRDDCASGVPQRDETTETLFASDVFSAGVTLFVLVSYHAILARLATEAPCKDVGEADASSLPALNVFQHAVGGDMFGLLQGGTRNGGVQGRLWAYWEVYGLSLPQALRGLLDGVLHPVPGRRFSMEQAFDWMDSHPEMY 522
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BLAST of mRNA_E-siliculosus-1a_F_contig1109.736.1 vs. uniprot
Match: A0A6H5JXI8_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXI8_9PHAE)

HSP 1 Score: 540 bits (1391), Expect = 1.020e-188
Identity = 278/292 (95.21%), Postives = 283/292 (96.92%), Query Frame = 1 
Query:  109 MVPVFDERWAKPGSTRVANDRDDADEAFARASPQSWMQEKLAMLQLRLEIDGDLTRFQPPQVFVVNIEDGALGSLLLTTTELFYSHQAILKSAGCFPNDLSMPLPCDVLRGSDFRISERYRCVADSKGQAQGGVGFIFEGLDMLDGSKVAVKFFHKSDDHAATTRTNMELITCLRLYHGLYSHCIDRRDNVDLCHLVRLHDVLVDAPIFEERNTNEGXXXXXXXXRVAAGLSPSIFRATVMVFEWADGGDAHSLVREAGGGIPAADGARLFRQVLRGLRALHRRKLVHRDVK 984
            MVPVFDERWAK GST VA+DRDDADEAFARASPQSWMQEKLAMLQLRLEIDGDLTRFQPPQVFVVNIEDGA+GSLLLTTTELFYSHQAIL SAGC PNDLSMPLPCDVLRGSDFRISERYRCVADSKGQAQGGVGFIFEGLDMLDGSKVAVKFFHKS+DHAAT RTNMELITCL+LYHGLYSHCIDRRDNVD CHLVRLHDVLVDAPIFEERN NEGXXXXXX  RVAAGLSPSIFRATVMVFEWADGGDAHSLVREAGGGIPAADGARLFRQVLRGLRALHRRK+VHRDVK
Sbjct:    1 MVPVFDERWAKSGSTVVADDRDDADEAFARASPQSWMQEKLAMLQLRLEIDGDLTRFQPPQVFVVNIEDGAVGSLLLTTTELFYSHQAILNSAGCCPNDLSMPLPCDVLRGSDFRISERYRCVADSKGQAQGGVGFIFEGLDMLDGSKVAVKFFHKSNDHAATMRTNMELITCLKLYHGLYSHCIDRRDNVDRCHLVRLHDVLVDAPIFEERNANEGXXXXXX--RVAAGLSPSIFRATVMVFEWADGGDAHSLVREAGGGIPAADGARLFRQVLRGLRALHRRKIVHRDVK 290
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1109.736.1 vs. uniprot
Match: A0A6H5JUX6_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX6_9PHAE)

HSP 1 Score: 410 bits (1053), Expect = 1.500e-138
Identity = 216/232 (93.10%), Postives = 220/232 (94.83%), Query Frame = 1 
Query:  982 KPENILLDDAGGFARLCDFGFAKHAPSVTPADLVGDPTTCYQAPERWQACRSPAAARAREKMAGETVVAVDNGEADAGEDQDEGXXXXXXXXXXRDDCASGVPQRDETTETLFASDVFSAGVTLFVLVSYHAILARLATEAPCRDVGEADASSLPALNVFQHAVGGDMFGLLQGGTRNGGVQGRLWAYWEVYGLSLPQALRGLLDGVLHPVPDRRFSMEQAFDWMDSHPEMY 1677
            +PENILLDDAGGFARLCDFGFAKHAPSVTPADL GDPTTCYQAPERWQACRSPAAARAREKMA ETVVA + GE DAGE     XXXXXXXXXXRDDCASGVPQRDETTETLFASDVFSAGVTLFVLVSYHAILARLATEAPCRDV EADASSLPALNVFQHAVGGDMFGLLQGGTRNGGVQGRLWAYWEVYGLSLPQALR LLDGVLHPVPDRRFSM+QAFDWMDSHPEM+
Sbjct:    9 QPENILLDDAGGFARLCDFGFAKHAPSVTPADLAGDPTTCYQAPERWQACRSPAAARAREKMAAETVVAGEKGEDDAGEXXX--XXXXXXXXXXRDDCASGVPQRDETTETLFASDVFSAGVTLFVLVSYHAILARLATEAPCRDVAEADASSLPALNVFQHAVGGDMFGLLQGGTRNGGVQGRLWAYWEVYGLSLPQALRDLLDGVLHPVPDRRFSMQQAFDWMDSHPEMF 238
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BLAST of mRNA_E-siliculosus-1a_F_contig1109.736.1 vs. uniprot
Match: A0A835YVB4_9STRA (Protein kinase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVB4_9STRA)

HSP 1 Score: 126 bits (316), Expect = 5.900e-27
Identity = 106/370 (28.65%), Postives = 149/370 (40.27%), Query Frame = 1 
Query:  673 DNVDLCHLVRLHDVLVDAPIFEERNTNEGXXXXXXXXRVAAGLSPSIFRATVMVFEWADGGDAHSLVREAGGGIPAADGARLFRQVLRGLRALHRRKLVHRDVKPENILL------DDAGGFA------------RLCDFGFAKHAPSVTPADLVGDPTTCYQAPERWQACRSPAAARAREKMAGETVVAVDNGEADAGEDQDEGXXXXXXXXXXRDDCASGVPQRDETTETLFASDVFSAGVTLFVLVSYHAILARLATEAP---------CRDVGEADASS---------------LPALNVFQHAVGGDMFGLLQGGTRNGGVQGRLWAYWEVYGLSLPQALRGLLDGVLHPVPDRRFSMEQAFDWM 1656
            D+  L H++R+ +VL  A +F    +                 +P+ + A  +V +WADGGD H  V +   G P    A L +     +  L       RDVKPEN LL         G +A            +L DFGFAK    +T  DL  DPTTCYQ PERW A     A + RE  A                                      + +  E  + L A D+FS G++ F  ++  AIL R                 D G+ DA                 +  LN+FQ A G  +FGLL  G   G  Q   W +W  YGL++PQ LR +LD +LHP P+ R+++ +   ++
Sbjct:  323 DSAGLQHILRVREVLCRAQVFAGGESG----------------TPTKYFANALVLDWADGGDLHQFVNDRHAGTPRDALAVLLQASCNSITTL----FFDRDVKPENFLLMPPKEGPPGGRYAHSARPPLRGMCLKLSDFGFAKKLSGLTTEDLSDDPTTCYQPPERWSALEQRCAEKLREYRA--------------------------------------IERAPEDLQLLSAGDIFSLGISAFFTLAIEAILDRRGARFEGGVAVAIDDWGDDGDGDAQEEEEDPEGLLGKYTNRIHTLNLFQEAPGERLFGLLNWGPA-GCSQKLFWRHWAAYGLNVPQDLRRVLDCMLHPRPECRWTVGEVLQYI 633
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BLAST of mRNA_E-siliculosus-1a_F_contig1109.736.1 vs. uniprot
Match: A0A2H5Z614_9BACT (Non-specific serine/threonine protein kinase n=2 Tax=Bacteria TaxID=2 RepID=A0A2H5Z614_9BACT)

HSP 1 Score: 82.0 bits (201), Expect = 8.870e-13
Identity = 51/100 (51.00%), Postives = 63/100 (63.00%), Query Frame = 1 
Query:  829 MVFEWADGGDAHSLVREAGGGIPAADGARLFRQVLRGLRALHRRKLVHRDVKPENILLDDAGGFARLCDFGFAKHA--PSVT-PADLVGDPTTCYQAPER 1119
            +V EW DGGD   L+RE    +P  +  RL   VL GL A+HR  +VHRDVKP N+LLD  G  A+L DFG A+ A  P++T P DL+G  T  Y APER
Sbjct:   87 LVMEWVDGGDLARLIRERAP-LPVDEAVRLALDVLNGLAAIHRAGIVHRDVKPANVLLDRHGR-AKLTDFGIARRADDPTLTGPVDLLG--TAPYVAPER 182
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BLAST of mRNA_E-siliculosus-1a_F_contig1109.736.1 vs. uniprot
Match: A0A831TFB5_9CHLR (Non-specific serine/threonine protein kinase n=1 Tax=Thermorudis peleae TaxID=1382356 RepID=A0A831TFB5_9CHLR)

HSP 1 Score: 75.5 bits (184), Expect = 1.120e-10
Identity = 44/100 (44.00%), Postives = 60/100 (60.00%), Query Frame = 1 
Query:  829 MVFEWADGGDAHSLVREAGGGIPAADGARLFRQVLRGLRALHRRKLVHRDVKPENILLDDAGGFARLCDFGFAKHAPSV---TPADLVGDPTTCYQAPER 1119
            +V EW DG D   L+RE    +PA +  R+   +LRGL A+HR  +VHRDVKP+N+L+D AG  A+L DFG A+ A          ++G  T  Y APE+
Sbjct:   94 LVMEWVDGTDLKRLIREQAP-LPADEAVRIALDLLRGLAAIHRAGIVHRDVKPQNVLIDRAGR-AKLADFGIARTARDTGLTETGSVIG--TAAYMAPEQ 189
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1109.736.1 vs. uniprot
Match: A0A562W950_9ACTN (Non-specific serine/threonine protein kinase n=2 Tax=Micromonospora sagamiensis TaxID=47875 RepID=A0A562W950_9ACTN)

HSP 1 Score: 74.7 bits (182), Expect = 2.360e-10
Identity = 66/209 (31.58%), Postives = 87/209 (41.63%), Query Frame = 1 
Query:  502 GGVGFIFEGLDMLDGSKVAVKFFHK--SDDHAATTRTNMELITCLRLYHGLYSHCIDRRDNVDLCHLVRLHDVLVDAPIFEERNTNEGXXXXXXXXRVAAGLSPSIFRATVMVFEWADGGDAHSLVREAGGGIPAADGARLFRQVLRGLRALHRRKLVHRDVKPENILLDDAGG--FARLCDFGFAKHAPSVTPADLVGDPTTCYQAPE 1116
            G  G ++ G  + DG +VAVK   +  S+D  A  R   E    LRL H                HLVR+HD++V+  +                        P+I      V +  DG D H + +   G +P AD A L  Q   GL A+H   LVHRDVKP N+L+    G   A L DFG A+          +G P   Y APE
Sbjct:  282 GASGEVWAGRRIADGDRVAVKVLRERLSEDERAVARFLREYRVLLRLRHP---------------HLVRVHDLVVEDGV------------------------PAI------VMDLVDGEDLHRVAQR--GPMPLADAAELLAQTAGGLAAVHAADLVHRDVKPANVLVTRRDGRQVALLSDFGIARAVAGAAHTQPIGTPA--YLAPE 441
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BLAST of mRNA_E-siliculosus-1a_F_contig1109.736.1 vs. uniprot
Match: UPI00082E1044 (serine/threonine protein kinase n=1 Tax=Microtetraspora malaysiensis TaxID=161358 RepID=UPI00082E1044)

HSP 1 Score: 73.9 bits (180), Expect = 3.510e-10
Identity = 44/99 (44.44%), Postives = 60/99 (60.61%), Query Frame = 1 
Query:  829 MVFEWADGGDAHSLVREAGGGIPAADGARLFRQVLRGLRALHRRKLVHRDVKPENILLDDAGGFARLCDFGFAK--HAPSVTPA-DLVGDPTTCYQAPE 1116
            +V +   GGD  +L+RE G  +P AD ARL  +V   L A H + +VHRD+KP N+L+D A G +RL DFG A+  H P +T    ++G P   Y APE
Sbjct:   89 LVMDLVQGGDLRALLRERGT-LPPADAARLMAEVADALAAAHAQGVVHRDIKPGNVLIDAATGQSRLTDFGVARIVHGPGLTQTTSVIGTPA--YLAPE 184
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1109.736.1 vs. uniprot
Match: UPI000B18D2C2 (serine/threonine protein kinase n=1 Tax=Nonomuraea sp. SBT364 TaxID=1580530 RepID=UPI000B18D2C2)

HSP 1 Score: 72.0 bits (175), Expect = 3.720e-10
Identity = 45/99 (45.45%), Postives = 59/99 (59.60%), Query Frame = 1 
Query:  829 MVFEWADGGDAHSLVREAGGGIPAADGARLFRQVLRGLRALHRRKLVHRDVKPENILLDDAGGFARLCDFGFAK--HAPSVTP-ADLVGDPTTCYQAPE 1116
            +V ++ +GGD  +LV E G   PA + AR+  QV   L A H   +VHRDVKP NIL+D   G  +L DFG A+  H P +T  A ++G PT  Y APE
Sbjct:   86 LVMDFVEGGDLRTLVHERGTLSPA-EAARMVAQVAGALAAAHTMGVVHRDVKPGNILIDGGTGQPKLTDFGVARIVHGPGITQTASIIGTPT--YLAPE 181
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1109.736.1 vs. uniprot
Match: UPI00193B9EC2 (serine/threonine protein kinase n=1 Tax=Archangium violaceum TaxID=83451 RepID=UPI00193B9EC2)

HSP 1 Score: 72.4 bits (176), Expect = 9.540e-10
Identity = 73/233 (31.33%), Postives = 98/233 (42.06%), Query Frame = 1 
Query:  454 ISERYRCVADSKGQAQGGVGFIFEGLDMLDGSKVAVKFFHK--SDDHAATTRTNMELITCLRLYHGLYSHCIDRRDNVDLCHLVRLHDVLVDAPIFEERNTNEGXXXXXXXXRVAAGLSPSIFRATVMVFEWADGGDAHSLVREAGGGIPAADGARLFRQVLRGLRALHRRKLVHRDVKPENILLDDAGGFA---RLCDFGFAKHAPSV---TPADLVGDPTTCYQAPERWQA 1128
            + ERYR +   +  A GG+G ++ G  +  G  VA+KF H   + D +   R  +E     RL H      ID             H V   AP                                 MV E+  G    +L+RE GG +P      L RQVL GL   H + +VHRD+KP+NILL +A G     R+ DFG AK   +V   T    VG P+  Y APE+ +A
Sbjct:    1 MQERYRIL---QRLAAGGMGVVYRGERLELGRAVAIKFLHSWMAADESFQRRFQIEAQAMSRLSHPCCVPVID-------------HGVHEGAPF--------------------------------MVMEFVTGQTLRALLRE-GGPLPVKRALGLVRQVLAGLAHAHAQGIVHRDIKPDNILLTEAIGLGDQVRILDFGLAKLRDTVSGLTTGLAVGTPS--YMAPEQIRA 182
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1109.736.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUX9_ECTSI0.000e+095.61Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A6H5JXI8_9PHAE1.020e-18895.21Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A6H5JUX6_9PHAE1.500e-13893.10Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A835YVB4_9STRA5.900e-2728.65Protein kinase domain-containing protein n=1 Tax=T... [more]
A0A2H5Z614_9BACT8.870e-1351.00Non-specific serine/threonine protein kinase n=2 T... [more]
A0A831TFB5_9CHLR1.120e-1044.00Non-specific serine/threonine protein kinase n=1 T... [more]
A0A562W950_9ACTN2.360e-1031.58Non-specific serine/threonine protein kinase n=2 T... [more]
UPI00082E10443.510e-1044.44serine/threonine protein kinase n=1 Tax=Microtetra... [more]
UPI000B18D2C23.720e-1045.45serine/threonine protein kinase n=1 Tax=Nonomuraea... [more]
UPI00193B9EC29.540e-1031.33serine/threonine protein kinase n=1 Tax=Archangium... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1109contigE-siliculosus-1a_F_contig1109:2193..5374 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1572
Model size1680
Exons5
Ec32 orthologEc-01_008590.1
Ec32 ortholog descriptionProtein kinase domain
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.T
EggNOG OGsKOG0032@1,KOG0032@2759
EggNOG free text desc.protein serine/threonine kinase activity
Seed eggNOG ortholog2880.D7FUX9
Seed ortholog evalue2.3e-279
Seed ortholog score967.6
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1109.736.1prot_E-siliculosus-1a_F_contig1109.736.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1109 2301..5374 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927614.5028708-UTR-E-siliculosus-1a_F_contig1109:2192..23001622927614.5028708-UTR-E-siliculosus-1a_F_contig1109:2192..2300Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1109 2193..2300 +
1696318610.3045564-UTR-E-siliculosus-1a_F_contig1109:2192..23001696318610.3045564-UTR-E-siliculosus-1a_F_contig1109:2192..2300Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1109 2193..2300 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927614.5491817-CDS-E-siliculosus-1a_F_contig1109:2300..23951622927614.5491817-CDS-E-siliculosus-1a_F_contig1109:2300..2395Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1109 2301..2395 +
1696318610.3157327-CDS-E-siliculosus-1a_F_contig1109:2300..23951696318610.3157327-CDS-E-siliculosus-1a_F_contig1109:2300..2395Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1109 2301..2395 +
1622927614.562532-CDS-E-siliculosus-1a_F_contig1109:2598..29471622927614.562532-CDS-E-siliculosus-1a_F_contig1109:2598..2947Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1109 2599..2947 +
1696318610.3245351-CDS-E-siliculosus-1a_F_contig1109:2598..29471696318610.3245351-CDS-E-siliculosus-1a_F_contig1109:2598..2947Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1109 2599..2947 +
1622927614.576096-CDS-E-siliculosus-1a_F_contig1109:3440..38721622927614.576096-CDS-E-siliculosus-1a_F_contig1109:3440..3872Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1109 3441..3872 +
1696318610.3335516-CDS-E-siliculosus-1a_F_contig1109:3440..38721696318610.3335516-CDS-E-siliculosus-1a_F_contig1109:3440..3872Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1109 3441..3872 +
1622927614.588093-CDS-E-siliculosus-1a_F_contig1109:4371..49341622927614.588093-CDS-E-siliculosus-1a_F_contig1109:4371..4934Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1109 4372..4934 +
1696318610.343287-CDS-E-siliculosus-1a_F_contig1109:4371..49341696318610.343287-CDS-E-siliculosus-1a_F_contig1109:4371..4934Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1109 4372..4934 +
1622927614.60075-CDS-E-siliculosus-1a_F_contig1109:5241..53741622927614.60075-CDS-E-siliculosus-1a_F_contig1109:5241..5374Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1109 5242..5374 +
1696318610.3558357-CDS-E-siliculosus-1a_F_contig1109:5241..53741696318610.3558357-CDS-E-siliculosus-1a_F_contig1109:5241..5374Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1109 5242..5374 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1109.736.1

>prot_E-siliculosus-1a_F_contig1109.736.1 ID=prot_E-siliculosus-1a_F_contig1109.736.1|Name=mRNA_E-siliculosus-1a_F_contig1109.736.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=524bp
MVPVFDERWAKPGSTRVANDRDDADEAFARASPQSWMQEKLAMLQLRLEI
DGDLTRFQPPQVFVVNIEDGALGSLLLTTTELFYSHQAILKSAGCFPNDL
SMPLPCDVLRGSDFRISERYRCVADSKGQAQGGVGFIFEGLDMLDGSKVA
VKFFHKSDDHAATTRTNMELITCLRLYHGLYSHCIDRRDNVDLCHLVRLH
DVLVDAPIFEERNTNEGGGGGGGGGRVAAGLSPSIFRATVMVFEWADGGD
AHSLVREAGGGIPAADGARLFRQVLRGLRALHRRKLVHRDVKPENILLDD
AGGFARLCDFGFAKHAPSVTPADLVGDPTTCYQAPERWQACRSPAAARAR
EKMAGETVVAVDNGEADAGEDQDEGGGRGGGGGGGRDDCASGVPQRDETT
ETLFASDVFSAGVTLFVLVSYHAILARLATEAPCRDVGEADASSLPALNV
FQHAVGGDMFGLLQGGTRNGGVQGRLWAYWEVYGLSLPQALRGLLDGVLH
PVPDRRFSMEQAFDWMDSHPEMY*
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mRNA from alignment at E-siliculosus-1a_F_contig1109:2193..5374+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1109.736.1 ID=mRNA_E-siliculosus-1a_F_contig1109.736.1|Name=mRNA_E-siliculosus-1a_F_contig1109.736.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3182bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1109:2193..5374+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GGACGACGCTGCATGCGGTGTACAGTATTTGCTTGCACGCTCAGGGTCGA
CAGAAAATAAACGTCGACAAGGCCTGAACAGCAGCAGGGCGAGGATTCAA
GAATCAAGATGGTACCGGTGTTTGACGAGCGTTGGGCAAAGCCGGGAAGT
ACCCGTGTTGCAAACGATCGCGACGACGCTGATGAAGCCTTCGCAAGAGC
GAGGTGAGCGCCAACGAGCGCCTCTGACTTGTTTGTGGGTGTTATTTTAG
CACCTAGGCAATAAGTTGTTTCCATTGGTCATGATCCACGCAACAAGCCG
TTGCGATGCGCACTGACTCTTCTCACACAAAATGTCCGACCCCGCTTCGC
CCGATTGTATCCTTCGCGTAAAAAATTATGTCGCCCGCTTCCCCCCTTTC
TTTCAGCCCACAATCCTGGATGCAGGAAAAGCTTGCCATGCTGCAGCTCC
GCCTTGAGATCGACGGCGATCTCACCCGCTTTCAGCCCCCACAAGTGTTC
GTCGTCAACATCGAGGACGGCGCTCTTGGGTCCCTGTTGCTAACGACGAC
CGAGCTGTTTTACAGTCACCAGGCAATCCTGAAATCGGCGGGGTGTTTCC
CCAATGATTTATCTATGCCCTTGCCGTGCGACGTCCTTCGCGGGAGCGAT
TTTCGCATCTCCGAGCGGTACCGTTGCGTCGCGGACAGCAAAGGTCAAGC
ACAGGGGGGTGTGGGCTTCATTTTCGAGGGGTTGGACATGCTCGACGGCA
GCAAGGTATATCTGCCCCAATTTTTGCTCCCAAGTCCCCGTTCGAGTCGT
GTATCTCGCGCACGTCGGCGGAGTAATGTATGTACCCAGATTGGAAAGAA
ACATTAATACTTTTTAAAACCGCACGGGGCGCGCTAGGGGGACATCAGCG
GCCGGAAACTGTTCCTGTAGAGCAGCGTATAGTATGCTTCTGCTAAACGT
TTTCGTGCCCCACCGCCGTTGCATCATACCACTCTAGGCGTGACTCTCAG
CTTAGTTATATATTGTTTCCTCTTGGCAGCTATGAGGCCCGCAGAGAATC
CGCCACGCGGGCTGTTTCTGCTAGCTCCGTCAGCACGCCAAGGAGCACCG
ACTCTCCTTCCAACGAAACGCACCCGCCCCCCCCCCTCTCCTTTCCTAGC
CGTTGACTTCATGTTCTTCGGCCGACCTCGTCATATCTCCACTTCATCCA
CCCCACCCATGCGTGTGACACGCCACGTTGAACTCGGACCAATCGCAGGT
TGCCGTCAAGTTTTTCCACAAGTCGGACGACCACGCCGCGACGACGCGGA
CGAACATGGAGCTCATCACGTGCCTGAGGCTGTACCACGGCCTCTATTCC
CACTGCATCGACCGGCGCGACAACGTAGACCTCTGCCACCTCGTGAGGCT
CCACGACGTCCTCGTTGACGCGCCCATCTTCGAAGAACGCAACACCAACG
AAGGCGGCGGCGGCGGCGGCGGCGGCGGTCGGGTGGCAGCCGGTCTTTCG
CCCTCGATCTTTCGGGCAACGGTCATGGTGTTCGAGTGGGCGGACGGCGG
TGACGCCCACTCTCTGGTGCGAGAGGCAGGTGGCGGGATACCCGCCGCCG
ACGGCGCGAGGCTGTTTCGGCAGGTCTTGCGGGGGCTGAGGGCTCTCCAC
AGAAGAAAACTCGTTCACAGGGACGTAAAGGTGCGAGTGAATGGCGTGGG
CAGGCTTGCTAAAACAGATGGTCTTGGAAGATTCTTTCTTCCGAAATATG
GTTTGCCATGTAATGGTAAAATTGCTTGTGTACCACAGCCTTTGAAAATA
CTTTTGGGTCCCGCCTCTCCGTGTAAACCATGCCGTGTCTGCTTGACTGT
CTGTTCGGCTTGAGGTAAAATGGAAGACCAACAAGCGCGTGGATGCTGTG
TCACTCGGTGTTGTCTTCCTCTAGTGCCGGGGGGGCTCGGCTTTTTACCC
AGATGCGTCTTATTGGATGACTTGCACACATTTTATGGATGCACGTGCGC
CGGAGCAGACAAAAAACACCTCCACACCTGTGGTTGAAGAGGAGTTTAGC
TAATCCGTCCCTTCACCGCCATAATAATTTTCTACACGTGCGCGTACGCA
TGAGCACGGTTTTTTGTTCCCCGCCGGTCTATCATTTTTTCCACCCTTAC
GCATGACGGGCCTCGTTTTCGTATTTCAGCCGGAGAATATCCTCCTCGAC
GACGCCGGCGGGTTTGCCCGCCTGTGCGACTTCGGCTTCGCCAAGCACGC
GCCATCGGTAACCCCGGCGGACCTCGTGGGCGACCCCACGACCTGCTACC
AAGCCCCCGAGCGCTGGCAGGCCTGCCGCAGCCCCGCGGCCGCCCGCGCG
CGCGAGAAAATGGCGGGAGAAACGGTGGTGGCCGTCGACAACGGAGAAGC
TGACGCCGGCGAAGACCAAGACGAAGGCGGCGGCCGCGGCGGCGGTGGCG
GTGGCGGGAGGGACGACTGCGCAAGCGGCGTGCCTCAGAGAGACGAGACC
ACGGAGACCCTGTTCGCCAGCGACGTCTTCAGCGCGGGCGTTACGTTGTT
CGTCCTCGTCTCCTACCACGCCATTCTCGCCCGCCTGGCGACGGAGGCCC
CGTGCAGGGACGTCGGAGAGGCGGACGCATCGAGCCTTCCGGCCCTGAAC
GTCTTCCAGCACGCCGTGGGCGGCGACATGTTCGGACTGCTGCAGGGGGG
CACCCGGAACGGCGGCGTGCAGGGGCGGTTGTGGGCGTACTGGTGAGATA
CATATACGTATATCGCATTTTGTTTTGGCCATGCTGCCTTGAACCGGTAC
GTGTGTTGAAGATTGAATTATACCCTGAAAAGCCTCCCCGCCGACGCTTT
GCAAGTGGAGATGACGAGACGTTGTCGTAGCACCAGTTTGGGGTGACCAC
ACGTGTGGGTCGCTGTGGCTAACGTACTCTACAAGGAAACTTTCTCCACG
TGTTTGATGAGTACCCGCGGTTGAATCCTGTTCACATCTATCTCTCTTTC
TCCCTCTACGCGTATGTCTGTCTGTTCTCGTCCTCTCTCGCGTTTTTAGG
GAGGTGTATGGGCTATCGCTACCACAGGCGCTGCGGGGTCTACTAGACGG
TGTCTTGCACCCTGTTCCCGACCGAAGGTTTTCGATGGAACAGGCGTTCG
ATTGGATGGATTCACACCCTGAAATGTATTAG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1109:2193..5374+

>mRNA_E-siliculosus-1a_F_contig1109.736.1 ID=mRNA_E-siliculosus-1a_F_contig1109.736.1|Name=mRNA_E-siliculosus-1a_F_contig1109.736.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3144bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1109:2193..5374+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGTACCGGTGTTTGACGAGCGTTGGGCAAAGCCGGGAAGTACCCGTGT
TGCAAACGATCGCGACGACGCTGATGAAGCCTTCGCAAGAGCGAGATGGT
ACCGGTGTTTGACGAGCGTTGGGCAAAGCCGGGAAGTACCCGTGTTGCAA
ACGATCGCGACGACGCTGATGAAGCCTTCGCAAGAGCGAGCCCACAATCC
TGGATGCAGGAAAAGCTTGCCATGCTGCAGCTCCGCCTTGAGATCGACGG
CGATCTCACCCGCTTTCAGCCCCCACAAGTGTTCGTCGTCAACATCGAGG
ACGGCGCTCTTGGGTCCCTGTTGCTAACGACGACCGAGCTGTTTTACAGT
CACCAGGCAATCCTGAAATCGGCGGGGTGTTTCCCCAATGATTTATCTAT
GCCCTTGCCGTGCGACGTCCTTCGCGGGAGCGATTTTCGCATCTCCGAGC
GGTACCGTTGCGTCGCGGACAGCAAAGGTCAAGCACAGGGGGGTGTGGGC
TTCATTTTCGAGGGGTTGGACATGCTCGACGGCAGCAAGCCCACAATCCT
GGATGCAGGAAAAGCTTGCCATGCTGCAGCTCCGCCTTGAGATCGACGGC
GATCTCACCCGCTTTCAGCCCCCACAAGTGTTCGTCGTCAACATCGAGGA
CGGCGCTCTTGGGTCCCTGTTGCTAACGACGACCGAGCTGTTTTACAGTC
ACCAGGCAATCCTGAAATCGGCGGGGTGTTTCCCCAATGATTTATCTATG
CCCTTGCCGTGCGACGTCCTTCGCGGGAGCGATTTTCGCATCTCCGAGCG
GTACCGTTGCGTCGCGGACAGCAAAGGTCAAGCACAGGGGGGTGTGGGCT
TCATTTTCGAGGGGTTGGACATGCTCGACGGCAGCAAGGTTGCCGTCAAG
TTTTTCCACAAGTCGGACGACCACGCCGCGACGACGCGGACGAACATGGA
GCTCATCACGTGCCTGAGGCTGTACCACGGCCTCTATTCCCACTGCATCG
ACCGGCGCGACAACGTAGACCTCTGCCACCTCGTGAGGCTCCACGACGTC
CTCGTTGACGCGCCCATCTTCGAAGAACGCAACACCAACGAAGGCGGCGG
CGGCGGCGGCGGCGGCGGTCGGGTGGCAGCCGGTCTTTCGCCCTCGATCT
TTCGGGCAACGGTCATGGTGTTCGAGTGGGCGGACGGCGGTGACGCCCAC
TCTCTGGTGCGAGAGGCAGGTGGCGGGATACCCGCCGCCGACGGCGCGAG
GCTGTTTCGGCAGGTCTTGCGGGGGCTGAGGGCTCTCCACAGAAGAAAAC
TCGTTCACAGGGACGTAAAGGTTGCCGTCAAGTTTTTCCACAAGTCGGAC
GACCACGCCGCGACGACGCGGACGAACATGGAGCTCATCACGTGCCTGAG
GCTGTACCACGGCCTCTATTCCCACTGCATCGACCGGCGCGACAACGTAG
ACCTCTGCCACCTCGTGAGGCTCCACGACGTCCTCGTTGACGCGCCCATC
TTCGAAGAACGCAACACCAACGAAGGCGGCGGCGGCGGCGGCGGCGGCGG
TCGGGTGGCAGCCGGTCTTTCGCCCTCGATCTTTCGGGCAACGGTCATGG
TGTTCGAGTGGGCGGACGGCGGTGACGCCCACTCTCTGGTGCGAGAGGCA
GGTGGCGGGATACCCGCCGCCGACGGCGCGAGGCTGTTTCGGCAGGTCTT
GCGGGGGCTGAGGGCTCTCCACAGAAGAAAACTCGTTCACAGGGACGTAA
AGCCGGAGAATATCCTCCTCGACGACGCCGGCGGGTTTGCCCGCCTGTGC
GACTTCGGCTTCGCCAAGCACGCGCCATCGGTAACCCCGGCGGACCTCGT
GGGCGACCCCACGACCTGCTACCAAGCCCCCGAGCGCTGGCAGGCCTGCC
GCAGCCCCGCGGCCGCCCGCGCGCGCGAGAAAATGGCGGGAGAAACGGTG
GTGGCCGTCGACAACGGAGAAGCTGACGCCGGCGAAGACCAAGACGAAGG
CGGCGGCCGCGGCGGCGGTGGCGGTGGCGGGAGGGACGACTGCGCAAGCG
GCGTGCCTCAGAGAGACGAGACCACGGAGACCCTGTTCGCCAGCGACGTC
TTCAGCGCGGGCGTTACGTTGTTCGTCCTCGTCTCCTACCACGCCATTCT
CGCCCGCCTGGCGACGGAGGCCCCGTGCAGGGACGTCGGAGAGGCGGACG
CATCGAGCCTTCCGGCCCTGAACGTCTTCCAGCACGCCGTGGGCGGCGAC
ATGTTCGGACTGCTGCAGGGGGGCACCCGGAACGGCGGCGTGCAGGGGCG
GTTGTGGGCGTACTGCCGGAGAATATCCTCCTCGACGACGCCGGCGGGTT
TGCCCGCCTGTGCGACTTCGGCTTCGCCAAGCACGCGCCATCGGTAACCC
CGGCGGACCTCGTGGGCGACCCCACGACCTGCTACCAAGCCCCCGAGCGC
TGGCAGGCCTGCCGCAGCCCCGCGGCCGCCCGCGCGCGCGAGAAAATGGC
GGGAGAAACGGTGGTGGCCGTCGACAACGGAGAAGCTGACGCCGGCGAAG
ACCAAGACGAAGGCGGCGGCCGCGGCGGCGGTGGCGGTGGCGGGAGGGAC
GACTGCGCAAGCGGCGTGCCTCAGAGAGACGAGACCACGGAGACCCTGTT
CGCCAGCGACGTCTTCAGCGCGGGCGTTACGTTGTTCGTCCTCGTCTCCT
ACCACGCCATTCTCGCCCGCCTGGCGACGGAGGCCCCGTGCAGGGACGTC
GGAGAGGCGGACGCATCGAGCCTTCCGGCCCTGAACGTCTTCCAGCACGC
CGTGGGCGGCGACATGTTCGGACTGCTGCAGGGGGGCACCCGGAACGGCG
GCGTGCAGGGGCGGTTGTGGGCGTACTGGGAGGTGTATGGGCTATCGCTA
CCACAGGCGCTGCGGGGTCTACTAGACGGTGTCTTGCACCCTGTTCCCGA
CCGAAGGTTTTCGATGGAACAGGCGTTCGATTGGATGGATTCACACCCTG
AAATGTATTAGGGAGGTGTATGGGCTATCGCTACCACAGGCGCTGCGGGG
TCTACTAGACGGTGTCTTGCACCCTGTTCCCGACCGAAGGTTTTCGATGG
AACAGGCGTTCGATTGGATGGATTCACACCCTGAAATGTATTAG
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