prot_E-siliculosus-1a_F_contig1107.725.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1107.725.1
Unique Nameprot_E-siliculosus-1a_F_contig1107.725.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length378
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1107.725.1 vs. uniprot
Match: A0A6H5KD04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD04_9PHAE)

HSP 1 Score: 303 bits (775), Expect = 5.760e-95
Identity = 162/191 (84.82%), Postives = 171/191 (89.53%), Query Frame = 0
Query:  188 LRFFEYFQTGVLDAESSRLSTGTVLLQVFFGYLDFGSDLYTAVSYYESGDLFWFALVLVFALGPGIIASVFFLTPTMVRVEVPSIRRVLVATQLSLLVEAWRNVVEERFTPILELVRLIEALFESVPQLLLQLYAALLLWASRERNVLRLGSVCISAGSLAYNATDMFSAKRLERCGDRPGGVICACCSRL 378
            LR+F+ F TGVLDAESSRL TGTV+LQVFFGYLD  SDLYTAVSYYESGD FWF LVL FALGPGIIASVFFLTPT+VRV VP +RRVLVATQLSLLVEAWRNV + RFTPILE+VRLIEALFESVPQLLLQLYAALLLW+S ERNVLRLGSVCISAGSLAYNATD+FSAKRLERC D   G IC CCS L
Sbjct:   43 LRYFDKFNTGVLDAESSRLPTGTVMLQVFFGYLDLVSDLYTAVSYYESGDSFWFTLVLAFALGPGIIASVFFLTPTIVRVRVPWVRRVLVATQLSLLVEAWRNVAKRRFTPILEVVRLIEALFESVPQLLLQLYAALLLWSSPERNVLRLGSVCISAGSLAYNATDLFSAKRLERCSDPLEGGICPCCSWL 233          
BLAST of mRNA_E-siliculosus-1a_F_contig1107.725.1 vs. uniprot
Match: D8LFI4_ECTSI (Leucine Rich Repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFI4_ECTSI)

HSP 1 Score: 159 bits (403), Expect = 2.330e-39
Identity = 207/369 (56.10%), Postives = 236/369 (63.96%), Query Frame = 0
Query:    2 ASTDREALSALFRSTGGVGWTQRGNWDTDARLATWYGVQVNEEGRVVGLALYSNDLQGPIPPELGQLQALKTLFLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALRFFEYFQTGVLDA------ESSRLSTGTVLLQVFFGYLDFGSDLYTAVSYYESGDLFWFALVLVFALGPGIIASVFFLTPTMVRVEVPSIRRVLVATQLSLLVEAWRNVVEERFTPILELVRLIEALFESVPQLLLQLYAALLLWASRERNVLRLG----SVCISAGSLAYNATDMFSAKRL 360
            A TDR+AL+AL + TG   W    +WDTD  + +WYGVQ N+E RV  L L SN+L+G IPP LG L  L  L L XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                  RF ++     +D         +  +   +++ V  GYLD  SDLYTAVSYY SG LFWF LV+ FALGP +I S FFL       E    RR LVATQLSLL+EA  +     ++P+L LVR+IE LFESVPQLLLQLYA LLLW+    +   L     SVCIS  SLAY ATD+ S +RL
Sbjct:    5 AETDRKALAALSQWTGSR-WRAGAHWDTDYHIGSWYGVQANDERRVERLELGSNNLRGFIPPRLGTLSVLTVLILSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGEIPKRLAEHP----------------------RFKKFIVGRAMDGPPLPHVNDAGHAVKILIVPVALGYLDLASDLYTAVSYYNSGHLFWFVLVVAFALGPAVIVSAFFLP------EFTCGRRFLVATQLSLLLEAVFSAASRTYSPVLALVRVIEPLFESVPQLLLQLYAMLLLWSETSLSNSDLNGRVISVCISTVSLAYAATDVSSVERL 344          
BLAST of mRNA_E-siliculosus-1a_F_contig1107.725.1 vs. uniprot
Match: D8LBY3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBY3_ECTSI)

HSP 1 Score: 132 bits (333), Expect = 3.560e-30
Identity = 86/171 (50.29%), Postives = 106/171 (61.99%), Query Frame = 0
Query:  211 VLLQVFFGYLDFGSDLYTAVSYYESGDLFWFALVLVFALGPGIIASVFFLTPTMVRVEVPSIRRVLVATQLSLLVEAWRNVVEERFTPILELVRLIEALFESVPQLLLQLYAALLLWA----SRERNVLRLGSVCISAGSLAYNATDMFSAKRLERCGDRPGGV---ICAC 374
            +++ V  GY D  SDLYTAVSYYE+    WF L LVFALGP +I S+F L+       +   RR LVA QLSLL EA   + +  ++P+L LVR+IE LFESVPQLLLQL+A L LW     +  R   R+ SVCISA SLAY ATD+ S +RL  C     G    +C C
Sbjct:  413 LIVPVLLGYADLASDLYTAVSYYEARHFVWFGLGLVFALGPAVIMSLFCLS------GIGWFRRFLVAAQLSLLAEALITLTKADYSPVLALVRVIEPLFESVPQLLLQLHAMLWLWTETSFTSSRLAWRVVSVCISAASLAYAATDVSSVERLSTCDGGKDGERFRLCPC 577          
BLAST of mRNA_E-siliculosus-1a_F_contig1107.725.1 vs. uniprot
Match: A0A6H5JJ93_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ93_9PHAE)

HSP 1 Score: 129 bits (323), Expect = 1.970e-29
Identity = 86/171 (50.29%), Postives = 104/171 (60.82%), Query Frame = 0
Query:  211 VLLQVFFGYLDFGSDLYTAVSYYESGDLFWFALVLVFALGPGIIASVFFLTPTMVRVEVPSIRRVLVATQLSLLVEAWRNVVEERFTPILELVRLIEALFESVPQLLLQLYAALLLWA----SRERNVLRLGSVCISAGSLAYNATDMFSAKRLERCGDRPGGV---ICAC 374
            +++ V  GY D  SDLYTAVSYYE+    WF L L FALGP +I S F L+       V   RR LVATQLSLL EA   + +  ++P+L LVR+I  LFESVPQLLLQL+A L LW     +  R   R+ SVCISA SLAY ATD+ S +RL  C     G    +C C
Sbjct:   66 LIVPVILGYADLASDLYTAVSYYEAKHFVWFGLGLFFALGPAVIMSAFCLS------GVGWFRRFLVATQLSLLAEALITLQKADYSPVLALVRVIGPLFESVPQLLLQLHAMLWLWTETSFASSRLAWRVVSVCISAASLAYAATDVSSVERLSTCDGGMDGERFRLCPC 230          
BLAST of mRNA_E-siliculosus-1a_F_contig1107.725.1 vs. uniprot
Match: A0A6H5L6T0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6T0_9PHAE)

HSP 1 Score: 111 bits (277), Expect = 3.030e-25
Identity = 53/75 (70.67%), Postives = 61/75 (81.33%), Query Frame = 0
Query:    1 MASTDREALSALFRSTGGVGWTQRGNWDTDARLATWYGVQVNEEGRVVGLALYSNDLQGPIPPELGQLQALKTLF 75
            M+STDREAL ALFRSTGG GW +R NWDTDA LATW GV VN++GRVVGL+L  N+LQGPIP +LG L AL  L+
Sbjct:   19 MSSTDREALIALFRSTGGAGWWRRDNWDTDAVLATWDGVNVNDQGRVVGLSLIRNNLQGPIPSKLGNLSALTALY 93          
BLAST of mRNA_E-siliculosus-1a_F_contig1107.725.1 vs. uniprot
Match: A0A6H5K6W6_9PHAE (HTH psq-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6W6_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 1.320e-24
Identity = 81/179 (45.25%), Postives = 101/179 (56.42%), Query Frame = 0
Query:  211 VLLQVFFGYLDFGSDLYTAVSYYESGDLFWFALVLVFALGPGIIASVFFLTPTMVRVEVPSIRRVLVATQLSLLVEAWRNVVEERFTPILELVRLIEALFESVPQLLLQLYAALLLWA----SRERNVLR-------------------------LGSVCISAGSLAYNATDMFSAKRL 360
            ++L V  GY D  SD++TAV Y+      W  L L FALGP +I S+FFL+           RRVLVAT LSL+ EAW  V +E+++P+L LVR++E LFESVPQLLLQLYA L+LW     S  R V R                         +GSVCIS  SLAY ATD+ S + L
Sbjct:   63 LVLPVSLGYPDLVSDIFTAVFYFRGDHPVWGGLGLAFALGPALITSIFFLS------GFQWYRRVLVATHLSLIYEAWTTVGDEQYSPVLALVRVVEPLFESVPQLLLQLYAMLILWTETMLSHGRLVWRXXXXXXXXXXXXXXXXXXXXXXXXXVGSVCISVASLAYAATDVSSVEFL 235          
BLAST of mRNA_E-siliculosus-1a_F_contig1107.725.1 vs. uniprot
Match: A0A6H5KQP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQP2_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 6.010e-24
Identity = 52/74 (70.27%), Postives = 58/74 (78.38%), Query Frame = 0
Query:    1 MASTDREALSALFRSTGGVGWTQRGNWDTDARLATWYGVQVNEEGRVVGLALYSNDLQGPIPPELGQLQALKTL 74
            M STDREAL +LFRSTGG GW +R NWDTDA LATW GV VN +GRVV L L  N+LQG IPPELG+L AL+ L
Sbjct:    1 MVSTDREALVSLFRSTGGAGWIRRDNWDTDADLATWNGVNVNVQGRVVNLDLQYNNLQGSIPPELGKLAALRAL 74          
BLAST of mRNA_E-siliculosus-1a_F_contig1107.725.1 vs. uniprot
Match: D7FX56_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX56_ECTSI)

HSP 1 Score: 112 bits (279), Expect = 4.190e-23
Identity = 53/74 (71.62%), Postives = 60/74 (81.08%), Query Frame = 0
Query:    1 MASTDREALSALFRSTGGVGWTQRGNWDTDARLATWYGVQVNEEGRVVGLALYSNDLQGPIPPELGQLQALKTL 74
            MASTDREAL ALFRSTGG GW QRGNWDTDA +ATW+GV+VN +GRVV L+L  N L+G IPPELG L  L+ L
Sbjct:    1 MASTDREALVALFRSTGGAGWRQRGNWDTDAAIATWHGVEVNAQGRVVNLSLGGNSLRGHIPPELGALSELQEL 74          
BLAST of mRNA_E-siliculosus-1a_F_contig1107.725.1 vs. uniprot
Match: A0A6H5KQQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQQ0_9PHAE)

HSP 1 Score: 102 bits (254), Expect = 4.590e-23
Identity = 50/76 (65.79%), Postives = 60/76 (78.95%), Query Frame = 0
Query:    1 MASTDREALSALFRSTGGVGWTQRGNWDTDARLATWYGVQVNEEGRVVGLALYSNDLQGPIPPELGQLQALKTLFL 76
            MAS DR+AL ALF STGG GWT+R NW+TDA  ATW+GV+VN++GRVV + L SN+LQGPIP ELG L  L +L L
Sbjct:    1 MASKDRDALVALFCSTGGAGWTRRDNWNTDADRATWFGVKVNDQGRVVDVDLGSNNLQGPIPKELGALAKLASLCL 76          
BLAST of mRNA_E-siliculosus-1a_F_contig1107.725.1 vs. uniprot
Match: D8LJS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJS7_ECTSI)

HSP 1 Score: 110 bits (274), Expect = 1.920e-22
Identity = 54/76 (71.05%), Postives = 62/76 (81.58%), Query Frame = 0
Query:    1 MASTDREALSALFRSTGGVGWTQRGNWDTDARLATWYGVQVNEEGRVVGLALYSNDLQGPIPPELGQLQALKTLFL 76
            MASTDREAL ALFR T G GW++RGNW TDA LATW GVQVN +GRVV L L +N+LQGPIPP LG+L AL+ L+L
Sbjct:    1 MASTDREALIALFRLTCGYGWSRRGNWGTDAELATWDGVQVNGQGRVVKLGLAANNLQGPIPPALGKLAALQDLYL 76          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1107.725.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KD04_9PHAE5.760e-9584.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFI4_ECTSI2.330e-3956.10Leucine Rich Repeat protein n=1 Tax=Ectocarpus sil... [more]
D8LBY3_ECTSI3.560e-3050.29Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5JJ93_9PHAE1.970e-2950.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L6T0_9PHAE3.030e-2570.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K6W6_9PHAE1.320e-2445.25HTH psq-type domain-containing protein n=1 Tax=Ect... [more]
A0A6H5KQP2_9PHAE6.010e-2470.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FX56_ECTSI4.190e-2371.62LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5KQQ0_9PHAE4.590e-2365.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJS7_ECTSI1.920e-2271.05LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 2..211
e-value: 1.2E-52
score: 180.9
IPR018629XK-related proteinPFAMPF09815XK-relatedcoord: 211..354
e-value: 4.1E-15
score: 55.7
NoneNo IPR availablePANTHERPTHR27000:SF648LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM2coord: 77..189
NoneNo IPR availablePANTHERPTHR27000FAMILY NOT NAMEDcoord: 54..186
NoneNo IPR availablePANTHERPTHR27000:SF648LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM2coord: 54..186
NoneNo IPR availablePANTHERPTHR27000FAMILY NOT NAMEDcoord: 77..189
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 308..328
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 289..307
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 261..271
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 329..378
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..237
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 272..288
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 238..260
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 13..188
NoneNo IPR availableTMHMMTMhelixcoord: 238..260

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1107contigE-siliculosus-1a_F_contig1107:2102..24308 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1107.725.1mRNA_E-siliculosus-1a_F_contig1107.725.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1107 2102..24321 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1107.725.1 ID=prot_E-siliculosus-1a_F_contig1107.725.1|Name=mRNA_E-siliculosus-1a_F_contig1107.725.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=378bp
MASTDREALSALFRSTGGVGWTQRGNWDTDARLATWYGVQVNEEGRVVGL
ALYSNDLQGPIPPELGQLQALKTLFLESNQLSGEIPASLGQLVKLENLFL
SRNTLSGPIPPELGQLQALKMLSLYSNQLSGPIPPELGDLRGLRHLWLYN
NKLAGSIPRELGKLRGLRHLKLTGNKLDGPIPTEVVALRFFEYFQTGVLD
AESSRLSTGTVLLQVFFGYLDFGSDLYTAVSYYESGDLFWFALVLVFALG
PGIIASVFFLTPTMVRVEVPSIRRVLVATQLSLLVEAWRNVVEERFTPIL
ELVRLIEALFESVPQLLLQLYAALLLWASRERNVLRLGSVCISAGSLAYN
ATDMFSAKRLERCGDRPGGVICACCSRL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018629XK-rel
IPR032675LRR_dom_sf