prot_E-siliculosus-1a_F_contig1104.714.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1104.714.1
Unique Nameprot_E-siliculosus-1a_F_contig1104.714.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length652
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1104.714.1 vs. uniprot
Match: A0A6H5K2V5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2V5_9PHAE)

HSP 1 Score: 568 bits (1465), Expect = 2.410e-192
Identity = 418/567 (73.72%), Postives = 428/567 (75.49%), Query Frame = 0 
Query:   64 MQAAXXXXXXXXXSGSLAPPPGLPRSSSTAELVALGFDPSGGMEGGNDLNSSEGGXXXXGYDPCPPAMXXXXXXXX-VGGGLDAGDMGGKDDGTGGTXXXXXXXXGLGLRNHSLTNLANMVRSQSVSSFHSEIFASGGKPVRSAAIESPAWGSYPANLDKMGSGXXXXXXX--EDIFTVSPS--MGPRGAGRGTLPMPMRPPTGGXDXXXXXXXXXXXXXXXXXXXXXXXXXXXDLSPQQFAGRGTAARREVVDRGMSAVAAAGSTRTSQRRP-----MGGGSSFDPRGMVPSGPGRSGAPPSGRAMVHNRSDTDLVASFSRLGFGQGGVSRWSPLMSPTASPLVGAPLLEEDPLDLELEEXXXXXXXXXXXXXGAAADTFGAPSSFLTSHGRRGLMDGHGASGEAPGMEVRLPRHASYPSLMVSRGGGXXXXXXXXXXXXXXXYGMEDLVHGALEHLTAGDSATGGAXXXXXXXXXXSGSGLASGGMXXXXXXXXXXXXXXXXXXXXATTNQTQTSAAVNGAGGGDSTAMVAPGTLGGGAGYTSSPGHSPASGSQGPPQGMGRQNP 620
            MQA          SGSLAPPPGLPRSSSTAELVALGFDPSGGMEGGNDLNSS+GGXXXX         XXXXXXXX V GG DAGD+GGK+DGTGGTXXXXXX  GLGLRNHSLTNLANMVRSQSVSSFHSEIFASGGKPV SAA+ESPAWGSYPANLDKMGSGXXXXXXX  EDIFT+SPS  +GPRGAGRG LPM  RPPTGG D                           DLSPQQFAGRGTAARREVVDRGMSA                   MGGGSSFDPRG+VPSGPGRSGA P GRAMVHNRSDTDLVASFSR GFGQGGVSRWSPLMSPTASPLVGAPLLEEDPLDLELEE             GAAADTFG PSSFLTSHGRRGLMDG GA+GEAP MEVRLPRHASYPSL VSRGGG XXXXXXXXXXXX  YGMEDLVHGALEHLTAGDSATGGA  XXXXXXXX+ SGLASGGM XXXXXXXXXXXXXXX XXX                                AGYTSSPGHSPASGSQGPPQG+GRQNP
Sbjct:    1 MQAPSASLSASASSGSLAPPPGLPRSSSTAELVALGFDPSGGMEGGNDLNSSDGGXXXXXXXXXXXXXXXXXXXXXXVXGGHDAGDIGGKNDGTGGTXXXXXXGMGLGLRNHSLTNLANMVRSQSVSSFHSEIFASGGKPVGSAAVESPAWGSYPANLDKMGSGXXXXXXXXXEDIFTLSPSPSVGPRGAGRGALPM--RPPTGGGDSDVVGGTGAGAGA--------------DLSPQQFAGRGTAARREVVDRGMSAXXXXXXXXXXXXXXXXXXXMGGGSSFDPRGIVPSGPGRSGALPGGRAMVHNRSDTDLVASFSRFGFGQGGVSRWSPLMSPTASPLVGAPLLEEDPLDLELEENASRGAGASGGAGGAAADTFGPPSSFLTSHGRRGLMDGQGAAGEAPSMEVRLPRHASYPSLTVSRGGGSXXXXXXXXXXXXG-YGMEDLVHGALEHLTAGDSATGGAGDXXXXXXXXNXSGLASGGMSXXXXXXXXXXXXXXXRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGYTSSPGHSPASGSQGPPQGLGRQNP 550
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1104.714.1 vs. uniprot
Match: D8LNL2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNL2_ECTSI)

HSP 1 Score: 513 bits (1322), Expect = 6.660e-175
Identity = 345/397 (86.90%), Postives = 350/397 (88.16%), Query Frame = 0 
Query:   77 SGSLAPPPGLPRSSSTAELVALGFDPSGGMEGGNDLNSSEGGXXXXGYDPCPPAMXXXXXXXX------VGGGLDAGDMGGKDDGTGGTXXXXXXXXGLGLRNHSLTNLANMVRSQSVSSFHSEIFASGGKPVRSAAIESPAWGSYPANLDKMGSGXXXXXXX---EDIFTVSPSMGPRGAGRGTLPMPMRPPTGGXDXXXXXXXXXXXXXXXXXXXXXXXXXXXDLSPQQFAGRGTAARREVVDRGMSAVAAAGSTRTSQRRPMGGGSSFDPRGMVPSGPGRSGAPPSGRAMVHNRSDTDLVASFSRLGFGQGGVSRWSPLMSPTASPLVGAPLLEEDPLDLELEEXXXXXXXXXXXXXGAAADTFGAPSSFLTSHGRRGLMDGHGASGEAPGMEV 464
            SGSLAPPPGLPRSSSTAELVALGFDPSG M+GGNDLNSS+GGXXXX         XXXXXXXX      VGGGLDAGDMGGKDDGT   XXXXXXX GLGLRNHSLTNLANMVRSQSVSSFHSEIFASGGKPVRS AI+SPAWGSYPANLDKMGSGXXXXXXX   ED+FTVSPSMGPRGAGRGTLPM  RPPTGG D    XXXXXXXXX  XXXXXX      DLSPQQFAGRGTAARREVVDRGMSA +AAGSTRTSQRRPMGGGSSFDPRGMVPSGPGRSGAPPSGRAMVHNRSDTDLVASFSRLGFGQGGVSRWSPLMSPTASPLVGAPLLEEDPLDLELEE    XXXXXXX  GAA DTFGAPSSFLTSHGRRGLMDGHGASGEAPGMEV
Sbjct:   12 SGSLAPPPGLPRSSSTAELVALGFDPSGVMDGGNDLNSSDGGXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGGLDAGDMGGKDDGTXXXXXXXXXXMGLGLRNHSLTNLANMVRSQSVSSFHSEIFASGGKPVRSTAIDSPAWGSYPANLDKMGSGXXXXXXXXXXEDMFTVSPSMGPRGAGRGTLPM--RPPTGGGDRGGVXXXXXXXXXDVXXXXXXGA----DLSPQQFAGRGTAARREVVDRGMSAGSAAGSTRTSQRRPMGGGSSFDPRGMVPSGPGRSGAPPSGRAMVHNRSDTDLVASFSRLGFGQGGVSRWSPLMSPTASPLVGAPLLEEDPLDLELEENASRXXXXXXX--GAAVDTFGAPSSFLTSHGRRGLMDGHGASGEAPGMEV 400
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1104.714.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K2V5_9PHAE2.410e-19273.72Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LNL2_ECTSI6.660e-17586.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1104contigE-siliculosus-1a_F_contig1104:21034..23413 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1104.714.1mRNA_E-siliculosus-1a_F_contig1104.714.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1104 16403..28862 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1104.714.1 ID=prot_E-siliculosus-1a_F_contig1104.714.1|Name=mRNA_E-siliculosus-1a_F_contig1104.714.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=652bp
MALLDLAYPAHVEQRATYASGFPGGTPSSGSSSSDSSGGGGPPTVAVASS
ARDSFASSQGQGDMQAASASLSASASSGSLAPPPGLPRSSSTAELVALGF
DPSGGMEGGNDLNSSEGGGGGAGYDPCPPAMSGSGGGGGVGGGLDAGDMG
GKDDGTGGTGTGSAGGMGLGLRNHSLTNLANMVRSQSVSSFHSEIFASGG
KPVRSAAIESPAWGSYPANLDKMGSGGGGGGGGEDIFTVSPSMGPRGAGR
GTLPMPMRPPTGGGDRGGVGVGGGGGGGDVGGGAGAGAGAGADLSPQQFA
GRGTAARREVVDRGMSAVAAAGSTRTSQRRPMGGGSSFDPRGMVPSGPGR
SGAPPSGRAMVHNRSDTDLVASFSRLGFGQGGVSRWSPLMSPTASPLVGA
PLLEEDPLDLELEENASRGAGAGAGAGGAAADTFGAPSSFLTSHGRRGLM
DGHGASGEAPGMEVRLPRHASYPSLMVSRGGGSGGGGGGGGGSGGGGYGM
EDLVHGALEHLTAGDSATGGAGEGSGSGGGGSGSGLASGGMSSGSLSGSA
SGRINGSRLSGATTNQTQTSAAVNGAGGGDSTAMVAPGTLGGGAGYTSSP
GHSPASGSQGPPQGMGRQNPSSSSSSSSSSTGLSTRSTSSLTTTGAVGWT
G*
back to top