prot_E-siliculosus-1a_F_contig11.684.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig11.684.1
Unique Nameprot_E-siliculosus-1a_F_contig11.684.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length176
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig11.684.1 vs. uniprot
Match: D7FL92_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL92_ECTSI)

HSP 1 Score: 331 bits (849), Expect = 1.450e-114
Identity = 164/178 (92.13%), Postives = 172/178 (96.63%), Query Frame = 0 
Query:    1 MGDADRKIPAVKLFISQLNNARQPVEAAGLTGLEENNLVGLVLVGIEFTRVWVQGIVIEVNPAERSFIVDDNTGTVTAVVPGVGLDGGSNDAGHGV--GDADGLPKKGQHVLMVGAVEAPCDDNGQGRRV-KRRSSCRRYRVLCDVVKDVGPESPNRDALWGLEVIDFWMSRPRNPQG 175
            MGDADRKIPAVKLF+SQLN+ARQPVEAA +TGLEE+NLVGLVL+GIEFTRVWVQGIVIEVNPAERSFIVDDNTGTVTAVVPG+GLDGG+NDAGHGV  G ADGLPKKGQHVLMVGAVEAPCDDNGQGRRV +RRSSCRRYRVLCDVVKDVGPESPNRD LWGLEVIDFWMSRPRNPQG
Sbjct:    1 MGDADRKIPAVKLFVSQLNSARQPVEAADVTGLEESNLVGLVLMGIEFTRVWVQGIVIEVNPAERSFIVDDNTGTVTAVVPGIGLDGGTNDAGHGVRDGGADGLPKKGQHVLMVGAVEAPCDDNGQGRRVQRRRSSCRRYRVLCDVVKDVGPESPNRDTLWGLEVIDFWMSRPRNPQG 178
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig11.684.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FL92_ECTSI1.450e-11492.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032245RecQ-mediated genome instability protein 2PFAMPF16100RMI2coord: 9..164
e-value: 2.7E-13
score: 49.8
IPR032245RecQ-mediated genome instability protein 2PANTHERPTHR33962FAMILY NOT NAMEDcoord: 5..166
NoneNo IPR availableGENE3D2.40.50.140coord: 6..129
e-value: 7.2E-6
score: 27.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig11contigE-siliculosus-1a_F_contig11:79226..81476 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig11.684.1mRNA_E-siliculosus-1a_F_contig11.684.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig11 79204..82496 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig11.684.1 ID=prot_E-siliculosus-1a_F_contig11.684.1|Name=mRNA_E-siliculosus-1a_F_contig11.684.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=176bp
MGDADRKIPAVKLFISQLNNARQPVEAAGLTGLEENNLVGLVLVGIEFTR
VWVQGIVIEVNPAERSFIVDDNTGTVTAVVPGVGLDGGSNDAGHGVGDAD
GLPKKGQHVLMVGAVEAPCDDNGQGRRVKRRSSCRRYRVLCDVVKDVGPE
SPNRDALWGLEVIDFWMSRPRNPQG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032245RMI2