mRNA_E-siliculosus-1a_F_contig10992.678.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig10992.678.1
Unique NamemRNA_E-siliculosus-1a_F_contig10992.678.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10992.678.1 vs. uniprot
Match: A0A6H5KYS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYS6_9PHAE)

HSP 1 Score: 556 bits (1433), Expect = 5.770e-194
Identity = 289/347 (83.29%), Postives = 296/347 (85.30%), Query Frame = 1
Query:    1 SDVVEHSELDLDVADMETNADLETEAGLADAYTAYSEGGNSDTPPTSAFAVSRCLNRCSAPTLSSRHRRCSEKSSEIRTVQGFSTDAQEKLSGEATFAVWDAYWGSADYADQFTSAACQGTGAFEGAEMVTRSECCLKGAQYQNVWMYVTHELYDAVGDCEIGGVFWCCML---HLSANDGGPHAWDEGWAFYTGSLEGTAVGGSGDGQMLYALAEKRCENFGTCTGDSDGSDATGVSAINSELLTLWEAGKANLLAGECTEASAVIDEIVPLMAVPLIQGLLRYTYLADPAIGTGGDKEAAELWAFSAAILPWISACDPAVGTTVRDNTELGSASAPMADGYATIK 1032
            SDVVEHSELDLDVADMETNADLETE GLA AYTAYSEGGNS                              EKS+EIRTVQGFST A EKL+GEATF VW+AYWGS DYADQFTSAACQGTGAFEGAEMVTRSECCLKGAQYQNVWMYVTHELYDAV DCEIGG   C  +    LSANDGGPHAWDEGWAFYTGSLEGTAVGGSGDGQMLYALAEKRCENFGTCTGDSDGSDATGVSAINSELL LWE GKANLLAG+CT+ASAVIDEI+PLMAVPLIQGLLRYTYLADPAIGTGGDKEAAELWAFSAAILPWISACDPAVGT VRDNTELG ASAPMADGYA IK
Sbjct:  200 SDVVEHSELDLDVADMETNADLETEVGLAAAYTAYSEGGNS------------------------------EKSTEIRTVQGFSTGADEKLTGEATFDVWEAYWGSPDYADQFTSAACQGTGAFEGAEMVTRSECCLKGAQYQNVWMYVTHELYDAVEDCEIGGG--CVKVAEGDLSANDGGPHAWDEGWAFYTGSLEGTAVGGSGDGQMLYALAEKRCENFGTCTGDSDGSDATGVSAINSELLDLWEDGKANLLAGQCTQASAVIDEILPLMAVPLIQGLLRYTYLADPAIGTGGDKEAAELWAFSAAILPWISACDPAVGTAVRDNTELGGASAPMADGYAAIK 514          
BLAST of mRNA_E-siliculosus-1a_F_contig10992.678.1 vs. uniprot
Match: D8LQ42_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ42_ECTSI)

HSP 1 Score: 533 bits (1374), Expect = 1.430e-174
Identity = 275/344 (79.94%), Postives = 286/344 (83.14%), Query Frame = 1
Query:    1 SDVVEHSELDLDVADMETNADLETEAGLADAYTAYSEGGNSDTPPTSAFAVSRCLNRCSAPTLSSRHRRCSEKSSEIRTVQGFSTDAQEKLSGEATFAVWDAYWGSADYADQFTSAACQGTGAFEGAEMVTRSECCLKGAQYQNVWMYVTHELYDAVGDCEIGGVFWCCMLHLSANDGGPHAWDEGWAFYTGSLEGTAVGGSGDGQMLYALAEKRCENFGTCTGDSDGSDATGVSAINSELLTLWEAGKANLLAGECTEASAVIDEIVPLMAVPLIQGLLRYTYLADPAIGTGGDKEAAELWAFSAAILPWISACDPAVGTTVRDNTELGSASAPMADGYATIK 1032
            SDVVEHSELDLDVADME   DLE+EAGL  AYTAYSEGGNS                              EK+   RT+QG STDAQEKL+GEATF VW+AYWGS DYADQ+TSAACQGTG FEGAEMVTRSECCLKGAQYQNVWMYVTHELYDAVGDCE G         LSANDGGPHAWDEGWAFYTGSLEGTAVGG+GDGQMLYALAEKRCENFGTCTGDSDGSD TGVSAINSELL LWE GKANLLA +CT+ASAVID+IVPLMAVPLIQGLLRYTYLADPAIGTGGDKEAAELWAFSA+ILPWISACD AVGTTVRDNTELGSASAPMADGYA IK
Sbjct:  411 SDVVEHSELDLDVADMEAGTDLESEAGLTAAYTAYSEGGNS------------------------------EKTDSTRTLQGLSTDAQEKLTGEATFDVWEAYWGSPDYADQYTSAACQGTGTFEGAEMVTRSECCLKGAQYQNVWMYVTHELYDAVGDCENGD--------LSANDGGPHAWDEGWAFYTGSLEGTAVGGTGDGQMLYALAEKRCENFGTCTGDSDGSDTTGVSAINSELLGLWEDGKANLLAEQCTQASAVIDQIVPLMAVPLIQGLLRYTYLADPAIGTGGDKEAAELWAFSASILPWISACDAAVGTTVRDNTELGSASAPMADGYAAIK 716          
BLAST of mRNA_E-siliculosus-1a_F_contig10992.678.1 vs. uniprot
Match: D8LFX4_ECTSI (Probable high CO2 inducible periplasmic protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFX4_ECTSI)

HSP 1 Score: 390 bits (1002), Expect = 3.610e-131
Identity = 204/344 (59.30%), Postives = 241/344 (70.06%), Query Frame = 1
Query:    1 SDVVEHSELDLDVADMETNADLETEAGLADAYTAYSEGGNSDTPPTSAFAVSRCLNRCSAPTLSSRHRRCSEKSSEIRTVQGFSTDAQEKLSGEATFAVWDAYWGSADYADQFTSAACQGTGAFEGAEMVTRSECCLKGAQYQNVWMYVTHELYDAVGDCEIGGVFWCCMLHLSANDGGPHAWDEGWAFYTGSLEGTAVGGSGDGQMLYALAEKRCENFGTCTGDSDGSDATGVSAINSELLTLWEAGKANLLAGECTEASAVIDEIVPLMAVPLIQGLLRYTYLADPAIGTGGDKEAAELWAFSAAILPWISACDPAVGTTVRDNTELGSASAPMADGYATIK 1032
            SDVVEHSELDLD+ ++E  ADL+T+AG A AYTAYS GGNS                              EK+  IRT+QGFST AQEKLSGE  F V++AYWGS DYADQFTS AC GT  F+ A + TR+E C+KGAQYQNVWMYV HEL DA+ DC+IG        +L+ANDGGPHAWDEGW FY GSLEGT   G+GDG MLYALAEKRCENF TCT D DGSD TG + +NS++L L++ G+  LL G+C  A  V D+I+ LM VPL+QG+LRY Y ADP  G GGDK AAELWAFSAA+LP I+ CD  V T VR NT++ SA APM++GY  +K
Sbjct:   36 SDVVEHSELDLDMQELEEGADLQTDAGFAAAYTAYSVGGNS------------------------------EKTDSIRTIQGFSTGAQEKLSGEKWFDVYEAYWGSTDYADQFTSGACNGTEQFDDASVETRAEGCVKGAQYQNVWMYVIHELEDAIEDCDIG--------NLNANDGGPHAWDEGWGFYAGSLEGTE--GTGDGVMLYALAEKRCENFATCTADDDGSDITGTAQVNSDMLELYKEGQVYLLDGDCGAAGDVKDKIIDLMGVPLVQGMLRYFYNADPEAGDGGDKAAAELWAFSAAMLPRINECDEEVATLVRANTDIASADAPMSEGYVFLK 339          
BLAST of mRNA_E-siliculosus-1a_F_contig10992.678.1 vs. uniprot
Match: D8LDE3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDE3_ECTSI)

HSP 1 Score: 321 bits (822), Expect = 1.260e-98
Identity = 182/345 (52.75%), Postives = 214/345 (62.03%), Query Frame = 1
Query:    1 SDVVEHSELDLDVADMETNADLETEAGLADAYTAYSEGGNSDTPPTSAFAVSRCLNRCSAPTLSSRHRRCSEKSSEIRTVQGFSTDAQEKLSGEATFAVWDAYWGSADYADQFTSAACQGTGAFEGAEMVTRSECCLKGAQYQNVWMYVTHELYDAVGDCEIGGVFWCCMLHLSANDGGPHAWDEGWAFYTGSLEGTAVGGSGDGQMLYALAEKRCENFGTCTGDSDGSDATGVSAINSELLTLWEAGKANLLAGECTEASAVIDEIVPLMAVPLIQGLLRYTYLADPAIGTGGD-KEAAELWAFSAAILPWISACDPAVGTTVRDNTELGSASAPMADGYATIK 1032
            SDVVEHS++DLD   METNADL+TE G   AY AYS GGNS                              E+    RT+Q FSTDA+EKL GE  F V+ AYWG+ DYAD+FTSAAC GTG++E  E V R+E C KGAQYQNVWMYV HE+ +AVG C  G           A DGGPH WDE WAFY GSLEG +    GDG+MLYALA+KRC NFGTC G +DG   TG +AIN ++L L  AG   LL G+C EA    + IV LM VPL+Q  LRY Y ADPA    GD K  AELWAF+AAILP I  C   V  TVR N+++ S  AP++ G+  +K
Sbjct:  397 SDVVEHSKIDLDTLAMETNADLQTEEGFTAAYEAYSLGGNS---------------------------MYGEEG--FRTIQAFSTDAEEKLGGEKWFEVYQAYWGAPDYADRFTSAACTGTGSYETVEPVVRAEACTKGAQYQNVWMYVIHEMENAVGACNRGD--------NGAADGGPHHWDEAWAFYAGSLEGESGNADGDGKMLYALAQKRCGNFGTC-GGADG--ITGTAAINDDILELIGAGSGYLLEGKCAEAEEAKESIVQLMTVPLVQATLRYLYRADPASDYDGDAKHWAELWAFAAAILPLIDECSADVAHTVRSNSDIDSEHAPVSAGFVAVK 701          
BLAST of mRNA_E-siliculosus-1a_F_contig10992.678.1 vs. uniprot
Match: A0A7S2V1S6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1S6_9STRA)

HSP 1 Score: 281 bits (718), Expect = 1.160e-85
Identity = 157/345 (45.51%), Postives = 200/345 (57.97%), Query Frame = 1
Query:    1 SDVVEHSELDLDVADMETNADLETEAGLADAYTAYSEGGNSDTPPTSAFAVSRCLNRCSAPTLSSRHRRCSEKSSEIRTVQGFSTDAQEKLSGEATFAVWDAYWGSADYADQFTSAACQGTGAFEGAEMVTRSECCLKGAQYQNVWMYVTHELYDAVGDCEIGGVFWCCMLHLSANDGGPHAWDEGWAFYTGSLEGTAVGGSGDGQMLYALAEKRCENFGTCTGDSDGSDA-TGVSAINSELLTLWEAGKANLLAGECTEASAVIDEIVPLMAVPLIQGLLRYTYLADPAIGTGGDKEAAELWAFSAAILPWISACDPAVGTTVRDNTELGSASAPMADGYATIK 1032
            SDV EH+ +DLD  D+        +   A AY AYS GGNS                              + S  +RT++GFST A  K++GE  + ++  YWG A YAD FTSAACQGTG +     + R ECC KGA YQNVWMYV HE+ DA+GDC+           L+ ND G  AWDE  AFYTGSLEG  V G GDG +LY+LA+KRC NFGTCTGD   S++ +G +A+N  ++ L+  G   L  G+C E   V + IV  M +PL+QG LRY Y ADP     G+K  AELWAFSAA+LP I+ CD  V + +R+N+ +G    PM DGY  +K
Sbjct:  264 SDVSEHASIDLDQGDLMDCLSESDDPDFACAYNAYSLGGNS-----------------------------LKSSGIVRTIKGFSTSAATKMAGEPFYGIYRTYWGDAAYADSFTSAACQGTGDYANVPDIVRVECCQKGAPYQNVWMYVIHEMEDAIGDCK--------SSDLTDNDSGVVAWDEAVAFYTGSLEG--VDGKGDGNLLYSLADKRCANFGTCTGDVGSSNSQSGRAAVNERIIDLFRDGSVKLHNGDCGEVEKVKNAIVDQMTIPLVQGTLRYLYKADPKGANEGNKARAELWAFSAAVLPRIAECDSGVASMLRENSYIGKD--PMKDGYVAVK 567          
BLAST of mRNA_E-siliculosus-1a_F_contig10992.678.1 vs. uniprot
Match: A0A7R9Y8Q2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y8Q2_9STRA)

HSP 1 Score: 262 bits (669), Expect = 8.100e-78
Identity = 143/281 (50.89%), Postives = 182/281 (64.77%), Query Frame = 1
Query:  211 SEKSSEIRTVQGFSTDAQEKLSGEATFAVWDAYWGSADYADQFTSAACQGTGAFEGAEMVTRSECCLKGAQYQNVWMYVTHELYDAVGDCEIGGVFWCCMLHLSANDGGPHAWDEGWAFYTGSLEGTAVGGSGDGQMLYALAEKRCENFGTCTGDSDGSDATGVSAINSELLTLWEAGKANLLAGECTEASAVIDEIVPLMAVPLIQGLLRYTYLADPAIG------TGGDKEAAELWAFSAAILPWISACDPAVGTTVRDNTEL--GSASAPMADGYATI 1029
            S K+S +RT+QGFST+A  KLSGE  + ++ AYWG+ DYADQF +AA  GTG +  +  + R E   KGA YQN WMYV HEL DAV DC+ G         ++  D   HAWDEGWAFY GSLE     G+G G  +YALAEKRC NF TCTGD DG  +TG SA+N+ELL+L++ G+  L AG C  A+ V+ EIV  M VPLIQG+LRY YLAD +IG         + + AE WAF+AA++P + ACD A+   +R N E   G+ S P+ DGY  +
Sbjct:   24 SMKTSGLRTLQGFSTEAGTKLSGEDLYELYRAYWGADDYADQFVTAALDGTGPYVDSSDLVRDEIASKGAAYQNTWMYVIHELEDAVLDCQAG-------TPMNNEDPAVHAWDEGWAFYAGSLED----GTGSGVQVYALAEKRCANFFTCTGDDDGDASTGRSAVNAELLSLYQEGQLALNAGNCNGAALVVREIVKQMTVPLIQGVLRYAYLADQSIGGVQATPEEWEDDQAEGWAFTAAVMPQLDACDAALAAEIRANMEFVQGNTS-PVQDGYEVV 292          
BLAST of mRNA_E-siliculosus-1a_F_contig10992.678.1 vs. uniprot
Match: A0A7S1TU13_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TU13_9STRA)

HSP 1 Score: 240 bits (613), Expect = 6.950e-73
Identity = 126/259 (48.65%), Postives = 159/259 (61.39%), Query Frame = 1
Query:  259 AQEKLSGEATFAVWDAYWGSADYADQFTSAACQGTGAFEGAEMVTRSECCLKGAQYQNVWMYVTHELYDAVGDCEIGGVFWCCMLHLSANDGGPHAWDEGWAFYTGSLEGTAVGGSGDGQMLYALAEKRCENFGTCTGDSDGSDATGVSAINSELLTLWEAGKANLLAGECTEASAVIDEIVPLMAVPLIQGLLRYTYLADPAIG--TGGDKEAAELWAFSAAILPWISACDPAVGTTVRDNTELGSASAPMADGYATI 1029
            A  KL+GE  + ++ AYWGS  YAD    AA  GTG + GA+ V R E   K A Y   WMYV HE+ DA+ DC  G +        ++ND   HAWDE W FY+G+LEG++  G+ DG + Y LAEKRC NFGTC GD DG   TG S +N +LL+L++ G   L  G+C  A  ++  IV  M VPLIQG LRY Y ADP  G  T   K+ AE WAF++A+LP I ACD  V + +R N E G AS P+ADGYA +
Sbjct:    1 AGTKLAGEELYELYRAYWGSDSYADDMVVAALDGTGIYAGADDVVREEIASKTAAYSVTWMYVIHEMEDAINDCNEGDI--------TSNDDAVHAWDEAWVFYSGTLEGSSEEGNRDGVLAYRLAEKRCANFGTCNGDDDGDATTGKSLVNDQLLSLYKQGMHALEDGKCNSAEVILRAIVKQMTVPLIQGTLRYAYKADPNGGADTPASKQQAEGWAFTSAVLPQIDACDAGVASMIRANMEYGVAS-PVADGYAAV 250          
BLAST of mRNA_E-siliculosus-1a_F_contig10992.678.1 vs. uniprot
Match: A0A7S1IQR3_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IQR3_9EUGL)

HSP 1 Score: 242 bits (618), Expect = 1.840e-70
Identity = 150/344 (43.60%), Postives = 188/344 (54.65%), Query Frame = 1
Query:    1 SDVVEHSELDLDVADMETNADLETEAGLADAYTAYSEGGNSDTPPTSAFAVSRCLNRCSAPTLSSRHRRCSEKSSEIRTVQGFSTDAQEKLSGEATFAVWDAYWGSADYADQFTSAACQGTGAFEGAEMVTRSECCLKGAQYQNVWMYVTHELYDAVGDCEIGGVFWCCMLHLSANDGGPHAWDEGWAFYTGSLEGTAVGGSGDGQMLYALAEKRCENFGTCTGDSDGSDATGVSAINSELLTLWEAGKANLLAGECTEASAVIDEIVPLMAVPLIQGLLRYTYLADPAIGTGGDKEAAELWAFSAAILPWISACDPAVGTTVRDNTELGSASAPMADGYATIK 1032
            SDV EH E+DLD + +ET            A T Y  G NS                              +KSS +RT+QGFST           + ++ AY+GSA YA+ F  AA +GTG F G   V R E   KG  Y N WMYV  E+ DA+ DC  G         L+ ND G HAWDE WAFY GSLEG    GSG G   YALA+KRC +FGTCT       A+G SAIN ++L L++ G A L AG+CT+A +V+  I   MAVPL+QG+LRY + ADP  G  G KE AE WAF+  ILP +  C  A  TTVR+N ++ SAS P++ G+A +K
Sbjct:  363 SDVKEHGEVDLDQSAIETAL---AAGDFTTARTIYVNGQNS------------------------------QKSSGLRTLQGFSTQMSAGKQQAELYQLFKAYYGSATYANDFVMAALEGTGVFAGKATVARQESVKKGISYGNTWMYVVVEMEDAIQDCTAG--------LLADNDKGVHAWDEAWAFYAGSLEG--ADGSGSGVQPYALADKRCVDFGTCT-------ASGGSAINRDILALFQDGLALLRAGKCTDARSVMTAITRKMAVPLVQGVLRYAWKADPVNGVSGPKEIAEGWAFTRGILPQVQQCSVAAATTVRNNMDIASAS-PVSGGFAAVK 655          
BLAST of mRNA_E-siliculosus-1a_F_contig10992.678.1 vs. uniprot
Match: A0A7S1IQD7_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IQD7_9EUGL)

HSP 1 Score: 226 bits (577), Expect = 3.620e-64
Identity = 132/278 (47.48%), Postives = 168/278 (60.43%), Query Frame = 1
Query:  205 RCSEKSSEIRTVQGFSTDAQEKLSGEATFAVWDAYWGSADYADQFTSAACQGTGAFEGAEMVTRSECCLKGAQYQNVWMYVTHELYDAVGDCEIGGVFWCCMLHLSANDGGPHAWDEGWAFYTGSLEGTAVGGSGDGQMLYALAEKRCENFGTCTGDSDGSDATGVSAINSELLTLWEAGKANLLAGECTEASAVIDEIVPLMAVPLIQGLLRYTYLADPAIGTG---GDKEAAELWAFSAAILPWISACDPAVGTTVRDNTELGSASAPMADGYATI 1029
            R S KSS +RT+QGF+T      +  A +  +  Y+GSA YAD F  AA QGTG F G   V+R E   KG+ Y N WMYV  EL DA+ DC+ G         L+ ND G HAWDE WAFY GSLEG  V GSG G   YALA+KRC +F TCT       ++G SA+N+ +L L++ G+A L+AG C  A A  D I   M VP++QG+LRY + ADPA       G KE AE WAF+  ILP + +C+P   T V+ N ++ +A+ PMADGY  I
Sbjct:   62 RHSHKSSGMRTLQGFATSISAGKADAALYQRFVQYYGSATYADDFVMAALQGTGVFAGKPAVSREESAAKGSAYGNSWMYVQLELEDAIDDCKAGA--------LADNDRGVHAWDEAWAFYAGSLEG--VDGSGSGVQPYALADKRCADFNTCT-------SSGGSAVNAAVLQLFKDGQALLVAGSCDAAQAKADAIARQMLVPMLQGMLRYAWKADPANSEEARRGPKEYAEGWAFARGILPQLDSCNPQGATLVQRNMDIAAAT-PMADGYQAI 321          
BLAST of mRNA_E-siliculosus-1a_F_contig10992.678.1 vs. uniprot
Match: F0Y9I4_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9I4_AURAN)

HSP 1 Score: 220 bits (560), Expect = 1.640e-60
Identity = 146/351 (41.60%), Postives = 197/351 (56.13%), Query Frame = 1
Query:    1 SDVVEHSELDLDVADMETNADLETEAGLADAYTAYSEGGNSDTPPTSAFAVSRCLNRCSAPTLSSRHRRCSEKSSEIRTVQGFSTDAQEKLSGEATFAVWDAYWGSADYADQFTSAACQGTGAFEGAEMVTRSECCLKGAQYQNVWMYVTHELYDAVGDCEIGGVFWCCMLHLSANDGGPHAWDEGWAFYTGSLEGTAVGGSGDGQMLYALAEKRCENFGTCTGDSDGSDATGVSAINSELLTLWEAGKANLLAGECTEASAVIDEIVPLMAVPLIQGLLRYTYLADPAIGTG----GD--KEAAELWAFSAAILPWISACDPAVGTTVRDNTELGSASAPMA-DGYATIK 1032
            +DVV HSE+DLD+ ++    D         A   YS GG      +S    +   + C   T +       + +  IRT++GF+T    K++ E  + V+  YWG  DYAD F   A  G GA+   + + R+E   KG  YQ VWMYV HE  DA+ DC  G ++       +A D  PHAWDEGWAFY GS+EGT   GSG GQML+ LAEKRC +FGTC   +DG   TG + +N++ LT  E G+  +L G C++ +   D IV  M +PLIQG+L+Y + ADPA   G    GD  KE AE WAF+AA+LP I  C  +V   + DN  +  ASAPM+ +GY  +K
Sbjct: 3003 TDVVPHSEVDLDMEEISAAVDS---YDWTQAEFVYSNGGGG-LCSSSDITTTDTTDSCYGHTTADAKGNSVKDNGAIRTLRGFATSGASKMAEETWWPVYKNYWGDDDYADTFVLKAFDG-GAWASKDDLMRAELVKKGVAYQAVWMYVLHEFEDAIKDCLSGDIY--DNDATTAGDS-PHAWDEGWAFYAGSIEGTD--GSGSGQMLFQLAEKRCADFGTC---ADG--ITGDANVNTKALTYAELGRDKILLGMCSDVATEFDLIVDQMTIPLIQGMLKYAFKADPANTQGSCTDGDCPKEWAEGWAFAAAVLPRIHYCSSSVAEVIVDNLSV-DASAPMSVNGYEYLK 3337          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10992.678.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KYS6_9PHAE5.770e-19483.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQ42_ECTSI1.430e-17479.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LFX4_ECTSI3.610e-13159.30Probable high CO2 inducible periplasmic protein n=... [more]
D8LDE3_ECTSI1.260e-9852.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2V1S6_9STRA1.160e-8545.51Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7R9Y8Q2_9STRA8.100e-7850.89Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S1TU13_9STRA6.950e-7348.65Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S1IQR3_9EUGL1.840e-7043.60Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
A0A7S1IQD7_9EUGL3.620e-6447.48Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
F0Y9I4_AURAN1.640e-6041.60Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig10992contigE-siliculosus-1a_F_contig10992:461..2160 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop0
Cds size1032
Model size1032
Exons5
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
EggNOG OGs29F58@1,2RNAK@2759
Seed eggNOG ortholog2880.D8LQ42
Seed ortholog evalue7.8e-151
Seed ortholog score540.0
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig10992.678.1prot_E-siliculosus-1a_F_contig10992.678.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig10992 461..2160 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927601.4511957-CDS-E-siliculosus-1a_F_contig10992:460..5821622927601.4511957-CDS-E-siliculosus-1a_F_contig10992:460..582Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10992 461..582 +
1696318605.983494-CDS-E-siliculosus-1a_F_contig10992:460..5821696318605.983494-CDS-E-siliculosus-1a_F_contig10992:460..582Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10992 461..582 +
1622927601.463901-CDS-E-siliculosus-1a_F_contig10992:697..9971622927601.463901-CDS-E-siliculosus-1a_F_contig10992:697..997Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10992 698..997 +
1696318605.9946198-CDS-E-siliculosus-1a_F_contig10992:697..9971696318605.9946198-CDS-E-siliculosus-1a_F_contig10992:697..997Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10992 698..997 +
1622927601.4752448-CDS-E-siliculosus-1a_F_contig10992:1142..12341622927601.4752448-CDS-E-siliculosus-1a_F_contig10992:1142..1234Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10992 1143..1234 +
1696318606.004371-CDS-E-siliculosus-1a_F_contig10992:1142..12341696318606.004371-CDS-E-siliculosus-1a_F_contig10992:1142..1234Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10992 1143..1234 +
1622927601.486561-CDS-E-siliculosus-1a_F_contig10992:1470..17981622927601.486561-CDS-E-siliculosus-1a_F_contig10992:1470..1798Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10992 1471..1798 +
1696318606.0143442-CDS-E-siliculosus-1a_F_contig10992:1470..17981696318606.0143442-CDS-E-siliculosus-1a_F_contig10992:1470..1798Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10992 1471..1798 +
1622927601.498822-CDS-E-siliculosus-1a_F_contig10992:1970..21601622927601.498822-CDS-E-siliculosus-1a_F_contig10992:1970..2160Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10992 1971..2160 +
1696318606.024775-CDS-E-siliculosus-1a_F_contig10992:1970..21601696318606.024775-CDS-E-siliculosus-1a_F_contig10992:1970..2160Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10992 1971..2160 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig10992.678.1

>prot_E-siliculosus-1a_F_contig10992.678.1 ID=prot_E-siliculosus-1a_F_contig10992.678.1|Name=mRNA_E-siliculosus-1a_F_contig10992.678.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=344bp
SDVVEHSELDLDVADMETNADLETEAGLADAYTAYSEGGNSDTPPTSAFA
VSRCLNRCSAPTLSSRHRRCSEKSSEIRTVQGFSTDAQEKLSGEATFAVW
DAYWGSADYADQFTSAACQGTGAFEGAEMVTRSECCLKGAQYQNVWMYVT
HELYDAVGDCEIGGVFWCCMLHLSANDGGPHAWDEGWAFYTGSLEGTAVG
GSGDGQMLYALAEKRCENFGTCTGDSDGSDATGVSAINSELLTLWEAGKA
NLLAGECTEASAVIDEIVPLMAVPLIQGLLRYTYLADPAIGTGGDKEAAE
LWAFSAAILPWISACDPAVGTTVRDNTELGSASAPMADGYATIK
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mRNA from alignment at E-siliculosus-1a_F_contig10992:461..2160+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig10992.678.1 ID=mRNA_E-siliculosus-1a_F_contig10992.678.1|Name=mRNA_E-siliculosus-1a_F_contig10992.678.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1700bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10992:461..2160+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
TCTGATGTCGTGGAGCACTCGGAGCTTGACCTGGACGTTGCCGACATGGA GACGAACGCCGATTTGGAGACGGAAGCGGGCCTCGCTGACGCGTACACGG CGTACTCCGAGGGCGGAAACAGGTGAGATAGTTGTGCAAATGGGTTGACC AGGGACGGCTAGCGGCAGCAAAAGCGCACGAAACGGGCGTCTTGCGATGC CGTTGTTGCCTGACCCTTCCGAAGAGTTTGCTTAAAGTGATACCCCGCCA ACTTCAGCATTTGCTGTGTCTCGGTGTCTTAACCGTTGTTCTGCCCCAAC CCTTTCGTCGCGGCACCGGCGTTGCAGCGAGAAGTCGAGCGAAATCCGGA CCGTTCAGGGCTTTTCCACCGACGCTCAAGAAAAGCTCTCCGGCGAAGCT ACCTTCGCCGTTTGGGATGCGTACTGGGGCAGCGCCGACTACGCCGACCA GTTCACGTCGGCGGCATGCCAAGGAACGGGCGCCTTCGAAGGCGCTGAGA TGGTCACGCGGTCTGAGTGCTGCCTCAAGGGAGCACAGTGAGTCTTGGAG TCCCGAGAATTGCTTTCTCTTTCTGTCACGGAGATAGCCTTGTCTAGTCA ATCGCTGCTCGAACACCGTAGCAAACACGCAAATGCCTGTCTCTCAATAT TGCGAACTTTGTGTCTGTGGCCCGACTTGCAGGTACCAGAACGTTTGGAT GTACGTGACTCACGAGCTCTACGACGCCGTCGGAGACTGCGAAATCGGAG GTGTGTTTTGGTGTTGCATGTTGCGTGTCGTTTGATACGTTCCAACTAGA CGTGGTTGCTGCTTACCAGAGCGTTCTTGGTTCGTTTGGATGTAGACTCG AGAGGTGTCGAGCCCTGAACGGTGCCCTAATGGCCTCACGAGAGTTGGGC ACGTGTGCACATCTCTTAGACCCGTTGACAGATATGGATCTGACCAGCCT TTCCCTTCTTGCATGTTCTGCCTTGGCCTTGAAACCCTGGTGCCTGCACA CACTGTACAGACCTGTCCGCCAACGACGGTGGGCCGCACGCCTGGGACGA AGGCTGGGCCTTCTACACGGGCTCCCTCGAGGGCACCGCCGTCGGAGGCT CGGGCGACGGGCAGATGCTGTACGCCCTGGCGGAGAAGAGGTGCGAGAAC TTCGGGACGTGCACGGGAGACTCGGACGGCAGCGACGCGACGGGCGTATC GGCGATCAACTCCGAGCTTCTCACTCTGTGGGAGGCTGGAAAGGCCAACC TGCTCGCCGGGGAATGTACCGAGGCGTCGGCTGTGATCGACGAGATCGTG CCGCTCATGGCTGTTCCTCTGATCCAGGGTCTGCTGAGGTGTGTATGGTT TTCTTGCATCGACCGCTACACGACTGACCAGTCCTGTTGTGACAGGACAT CCGAACCTTCCCCTCGTTTACTAGCTTTAGCTCCCATTCTTTGATCAGTC AGGCTTTCAAGTCTAACCCCTTCCCCTCTTCTGGCGTGTGTCAACCACTC CTATGTGCAGGTACACATACCTCGCTGACCCCGCTATTGGAACGGGCGGT GACAAGGAGGCCGCTGAGCTCTGGGCCTTCTCTGCCGCTATCTTGCCGTG GATCAGCGCGTGTGATCCCGCTGTGGGGACTACCGTCCGCGACAACACCG AGCTCGGGAGCGCCAGCGCGCCCATGGCGGACGGGTACGCGACGATCAAG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10992:461..2160+

>mRNA_E-siliculosus-1a_F_contig10992.678.1 ID=mRNA_E-siliculosus-1a_F_contig10992.678.1|Name=mRNA_E-siliculosus-1a_F_contig10992.678.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2064bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10992:461..2160+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
TCTGATGTCGTGGAGCACTCGGAGCTTGACCTGGACGTTGCCGACATGGA
GACGAACGCCGATTTGGAGACGGAAGCGGGCCTCGCTGACGCGTACACGG
CGTACTCCGAGGGCGGAAACAGTCTGATGTCGTGGAGCACTCGGAGCTTG
ACCTGGACGTTGCCGACATGGAGACGAACGCCGATTTGGAGACGGAAGCG
GGCCTCGCTGACGCGTACACGGCGTACTCCGAGGGCGGAAACAGTGATAC
CCCGCCAACTTCAGCATTTGCTGTGTCTCGGTGTCTTAACCGTTGTTCTG
CCCCAACCCTTTCGTCGCGGCACCGGCGTTGCAGCGAGAAGTCGAGCGAA
ATCCGGACCGTTCAGGGCTTTTCCACCGACGCTCAAGAAAAGCTCTCCGG
CGAAGCTACCTTCGCCGTTTGGGATGCGTACTGGGGCAGCGCCGACTACG
CCGACCAGTTCACGTCGGCGGCATGCCAAGGAACGGGCGCCTTCGAAGGC
GCTGAGATGGTCACGCGGTCTGAGTGCTGCCTCAAGGGAGCACATGATAC
CCCGCCAACTTCAGCATTTGCTGTGTCTCGGTGTCTTAACCGTTGTTCTG
CCCCAACCCTTTCGTCGCGGCACCGGCGTTGCAGCGAGAAGTCGAGCGAA
ATCCGGACCGTTCAGGGCTTTTCCACCGACGCTCAAGAAAAGCTCTCCGG
CGAAGCTACCTTCGCCGTTTGGGATGCGTACTGGGGCAGCGCCGACTACG
CCGACCAGTTCACGTCGGCGGCATGCCAAGGAACGGGCGCCTTCGAAGGC
GCTGAGATGGTCACGCGGTCTGAGTGCTGCCTCAAGGGAGCACAGTACCA
GAACGTTTGGATGTACGTGACTCACGAGCTCTACGACGCCGTCGGAGACT
GCGAAATCGGAGGTGTGTTTTGGTGTTGCATGTTGCGTACCAGAACGTTT
GGATGTACGTGACTCACGAGCTCTACGACGCCGTCGGAGACTGCGAAATC
GGAGGTGTGTTTTGGTGTTGCATGTTGCACCTGTCCGCCAACGACGGTGG
GCCGCACGCCTGGGACGAAGGCTGGGCCTTCTACACGGGCTCCCTCGAGG
GCACCGCCGTCGGAGGCTCGGGCGACGGGCAGATGCTGTACGCCCTGGCG
GAGAAGAGGTGCGAGAACTTCGGGACGTGCACGGGAGACTCGGACGGCAG
CGACGCGACGGGCGTATCGGCGATCAACTCCGAGCTTCTCACTCTGTGGG
AGGCTGGAAAGGCCAACCTGCTCGCCGGGGAATGTACCGAGGCGTCGGCT
GTGATCGACGAGATCGTGCCGCTCATGGCTGTTCCTCTGATCCAGGGTCT
GCTGAGACCTGTCCGCCAACGACGGTGGGCCGCACGCCTGGGACGAAGGC
TGGGCCTTCTACACGGGCTCCCTCGAGGGCACCGCCGTCGGAGGCTCGGG
CGACGGGCAGATGCTGTACGCCCTGGCGGAGAAGAGGTGCGAGAACTTCG
GGACGTGCACGGGAGACTCGGACGGCAGCGACGCGACGGGCGTATCGGCG
ATCAACTCCGAGCTTCTCACTCTGTGGGAGGCTGGAAAGGCCAACCTGCT
CGCCGGGGAATGTACCGAGGCGTCGGCTGTGATCGACGAGATCGTGCCGC
TCATGGCTGTTCCTCTGATCCAGGGTCTGCTGAGGTACACATACCTCGCT
GACCCCGCTATTGGAACGGGCGGTGACAAGGAGGCCGCTGAGCTCTGGGC
CTTCTCTGCCGCTATCTTGCCGTGGATCAGCGCGTGTGATCCCGCTGTGG
GGACTACCGTCCGCGACAACACCGAGCTCGGGAGCGCCAGCGCGCCCATG
GCGGACGGGTACGCGACGATCAAGGTACACATACCTCGCTGACCCCGCTA
TTGGAACGGGCGGTGACAAGGAGGCCGCTGAGCTCTGGGCCTTCTCTGCC
GCTATCTTGCCGTGGATCAGCGCGTGTGATCCCGCTGTGGGGACTACCGT
CCGCGACAACACCGAGCTCGGGAGCGCCAGCGCGCCCATGGCGGACGGGT
ACGCGACGATCAAG
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