mRNA_E-siliculosus-1a_F_contig10923.643.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig10923.643.1
Unique NamemRNA_E-siliculosus-1a_F_contig10923.643.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10923.643.1 vs. uniprot
Match: D1J752_ECTSI (50S ribosomal protein L3, chloroplastic n=9 Tax=Ectocarpales TaxID=2877 RepID=D1J752_ECTSI)

HSP 1 Score: 276 bits (706), Expect = 8.910e-92
Identity = 204/207 (98.55%), Postives = 206/207 (99.52%), Query Frame = 1
Query:    4 VSIGIFGNKIGMTQIFDKNGLALPVTVVSVGPCFITQLKTEKTNGYDAIQIGYSKGHTSKFSKAELGHLEKNGLSPXXXXXEYKVNXXKNYSLXXXXXXXXXXXXXXXXXTGKSIGKGFSGNQKRHKFKRGPMTHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSKLEILGIDSKQNLLILKGSVPGKPGNLLNIINSK 624
            +SIGIFGNKIGMTQIFDKNGLALPVTVVSVGPCFITQLKTEKTNGYDAIQIGYSKGHTSKFSKAELGHLEKNGLSPXXXXXEY+V XXKNYSLXXXXXXXXXXXXXXXXXTGKSIGKGFSGNQKRHKFKRGPMTHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSKLEILGIDSKQNLLILKGSVPGKPGNLLNIINSK
Sbjct:    1 MSIGIFGNKIGMTQIFDKNGLALPVTVVSVGPCFITQLKTEKTNGYDAIQIGYSKGHTSKFSKAELGHLEKNGLSPXXXXXEYRVXXXKNYSLXXXXXXXXXXXXXXXXXTGKSIGKGFSGNQKRHKFKRGPMTHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSKLEILGIDSKQNLLILKGSVPGKPGNLLNIINSK 207          
BLAST of mRNA_E-siliculosus-1a_F_contig10923.643.1 vs. uniprot
Match: A0A1L2F1Q4_9PHAE (Ribosomal protein L3 n=1 Tax=Coccophora langsdorfii TaxID=74099 RepID=A0A1L2F1Q4_9PHAE)

HSP 1 Score: 220 bits (561), Expect = 1.070e-69
Identity = 163/204 (79.90%), Postives = 174/204 (85.29%), Query Frame = 1
Query:    1 LVSIGIFGNKIGMTQIFDKNGLALPVTVVSVGPCFITQLKTEKTNGYDAIQIGYSKGHTSKFSKAELGHLEKNGLSPXXXXXEYKVNXXKNYSLXXXXXXXXXXXXXXXXXTGKSIGKGFSGNQKRHKFKRGPMTHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSKLEILGIDSKQNLLILKGSVPGKPGNLLNI 612
            +VSIGIFGNKIGMTQIFDK+GLAL VTV+ VGPCFITQLKTE  NGY+A+QIGY K    +  KAELGHL KNGL P     EY+V    NYSL   XXXXXXXXXXXXXX GKSIGKGFSGNQKRHKFKRGPMTHGS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TVSK+++LGID KQNLLILKGSVPGK GNLL+I
Sbjct:    1 MVSIGIFGNKIGMTQIFDKDGLALAVTVIRVGPCFITQLKTESINGYNAVQIGYLKRQPIRVKKAELGHLTKNGLPPLLHLREYRVPDLNNYSLGQMXXXXXXXXXXXXXXXGKSIGKGFSGNQKRHKFKRGPMTHGSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITVSKVQVLGIDEKQNLLILKGSVPGKSGNLLSI 204          
BLAST of mRNA_E-siliculosus-1a_F_contig10923.643.1 vs. uniprot
Match: D1GJT2_FUCVE (50S ribosomal protein L3, chloroplastic n=3 Tax=Fucaceae TaxID=3010 RepID=D1GJT2_FUCVE)

HSP 1 Score: 219 bits (559), Expect = 2.080e-69
Identity = 141/203 (69.46%), Postives = 150/203 (73.89%), Query Frame = 1
Query:    4 VSIGIFGNKIGMTQIFDKNGLALPVTVVSVGPCFITQLKTEKTNGYDAIQIGYSKGHTSKFSKAELGHLEKNGLSPXXXXXEYKVNXXKNYSLXXXXXXXXXXXXXXXXXTGKSIGKGFSGNQKRHKFKRGPMTHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSKLEILGIDSKQNLLILKGSVPGKPGNLLNI 612
            +SIGIFGNKIGMTQIFDK GLALPVTV+ VGPCFITQLKTE+ NGY A+QIGY K    K +KAELGHL KNGL P     EYKV    NYSL                 +GKSIGKGFSGNQKRH FKRGPMTH  XXXXXXXXXXXXXXXXXXXXXXX          T+SKLEILGIDSK +LLILKGSVPGK GNLLN+
Sbjct:    1 MSIGIFGNKIGMTQIFDKEGLALPVTVIRVGPCFITQLKTEQLNGYSAVQIGYLKRQVLKLNKAELGHLTKNGLLPLLYLREYKVPDPTNYSLGQVINVDYFQIGQFVNVSGKSIGKGFSGNQKRHNFKRGPMTHXXXXXXXXXXXXXXXXXXXXXXXXXMAGQLGAKKVTISKLEILGIDSKHSLLILKGSVPGKSGNLLNV 203          
BLAST of mRNA_E-siliculosus-1a_F_contig10923.643.1 vs. uniprot
Match: A0A0R6MC27_UNDPI (50S ribosomal protein L3, chloroplastic n=28 Tax=Laminariales TaxID=2886 RepID=A0A0R6MC27_UNDPI)

HSP 1 Score: 218 bits (556), Expect = 3.890e-69
Identity = 161/195 (82.56%), Postives = 173/195 (88.72%), Query Frame = 1
Query:   37 MTQIFDKNGLALPVTVVSVGPCFITQLKTEKTNGYDAIQIGYSKGHTSKFSKAELGHLEKNGLSPXXXXXEYKVNXXKNYSLXXXXXXXXXXXXXXXXXTGKSIGKGFSGNQKRHKFKRGPMTHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSKLEILGIDSKQNLLILKGSVPGKPGNLLNIINS 621
            MTQ+FDK+GLALPVTV+S+G CFITQ+KTEK NGY+A+QIG+SKG T    KAELGHL+KNGL P     EYKV   +NYSL    XXXXXXXXXXXXX GKSIGKGFSGNQKRHKFKRGPMTHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSKLEILGIDSKQNLLILKG+VPGKPGNLLNI+ S
Sbjct:    1 MTQVFDKDGLALPVTVISIGSCFITQIKTEKLNGYNAVQIGHSKGRTVNLKKAELGHLKKNGLPPLSDLCEYKVMDLENYSLGQVLXXXXXXXXXXXXXXGKSIGKGFSGNQKRHKFKRGPMTHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSKLEILGIDSKQNLLILKGNVPGKPGNLLNIVPS 195          
BLAST of mRNA_E-siliculosus-1a_F_contig10923.643.1 vs. uniprot
Match: A0A8F0JZG8_9PHAE (Ribosomal protein L3 n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0JZG8_9PHAE)

HSP 1 Score: 202 bits (514), Expect = 9.180e-63
Identity = 152/193 (78.76%), Postives = 163/193 (84.46%), Query Frame = 1
Query:   37 MTQIFDKNGLALPVTVVSVGPCFITQLKTEKTNGYDAIQIGYSKGHTSKFSKAELGHLEKNGLSPXXXXXEYKVNXXKNYSLXXXXXXXXXXXXXXXXXTGKSIGKGFSGNQKRHKFKRGPMTHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSKLEILGIDSKQNLLILKGSVPGKPGNLLNII 615
            MTQ+FDKNGLALPVTVV VGPC ITQLKTEK NGY+A+QIGYS+G  + F+KAELGHL KNGL P     EYKV   +NYSL   XXXXXXXXXXXXXX   SIGKGFSG+ KRHKFKRGPMTH  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   TVSKLE+LGID KQNLLILKGS+PGK GNLLNI+
Sbjct:    1 MTQVFDKNGLALPVTVVRVGPCLITQLKTEKINGYNAVQIGYSQGRITNFNKAELGHLTKNGLPPLSHLHEYKVLDTENYSLGQIXXXXXXXXXXXXXXXXXSIGKGFSGSHKRHKFKRGPMTHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKITVSKLEVLGIDLKQNLLILKGSIPGKTGNLLNIV 193          
BLAST of mRNA_E-siliculosus-1a_F_contig10923.643.1 vs. uniprot
Match: A0A8F0F776_9PHAE (Ribosomal protein L3 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F776_9PHAE)

HSP 1 Score: 202 bits (513), Expect = 1.300e-62
Identity = 155/196 (79.08%), Postives = 168/196 (85.71%), Query Frame = 1
Query:   37 MTQIFDKNGLALPVTVVSVGPCFITQLKTEKTNGYDAIQIGYSKGHTSKFSKAELGHLEKNGLSPXXXXXEYKVNXXKNYSLXXXXXXXXXXXXXXXXXTGKSIGKGFSGNQKRHKFKRGPMTHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSKLEILGIDSKQNLLILKGSVPGKPGNLLNIINSK 624
            MTQIF+K GLALPVTV++VGPC IT LKT+  +GY+AIQIGYS+G  S+F KAELGHL+KNGL P     EYKV   +NY +    XXXXXXXXXXXXX GKSIGKGFSGN KRHKFKRGPMTH  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSKLEILGID KQNLLILKG+VPGKPGNLLNII S+
Sbjct:    1 MTQIFNKEGLALPVTVINVGPCLITYLKTQNIHGYNAIQIGYSQGRDSQFKKAELGHLKKNGLPPLYHLCEYKVLSTQNYCVGQKIXXXXXXXXXXXXXXGKSIGKGFSGNHKRHKFKRGPMTHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSKLEILGIDYKQNLLILKGNVPGKPGNLLNIIPSQ 196          
BLAST of mRNA_E-siliculosus-1a_F_contig10923.643.1 vs. uniprot
Match: A0A8F0JYJ1_9PHAE (Ribosomal protein L3 n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0JYJ1_9PHAE)

HSP 1 Score: 201 bits (511), Expect = 2.620e-62
Identity = 136/195 (69.74%), Postives = 147/195 (75.38%), Query Frame = 1
Query:   37 MTQIFDKNGLALPVTVVSVGPCFITQLKTEKTNGYDAIQIGYSKGHTSKFSKAELGHLEKNGLSPXXXXXEYKVNXXKNYSLXXXXXXXXXXXXXXXXXTGKSIGKGFSGNQKRHKFKRGPMTHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSKLEILGIDSKQNLLILKGSVPGKPGNLLNIINS 621
            MTQ+FDKNGLALPVTV+ VG C ITQLKTE+ NGY+A+QIGYSKG      KAELGHL+KNGL P     EY+V   ++YSL                 TGKSIGKGFSGN KRHKFKRGPMTH  XXXXXXXXXXXXXXXXXXXXXXXXXXXX     TVSKL+ILGID K NLLILKGSVPGKPGNL+ II S
Sbjct:    1 MTQVFDKNGLALPVTVIRVGSCVITQLKTEEINGYNAVQIGYSKGQKLNLKKAELGHLKKNGLPPLSHLCEYRVTEQEDYSLGQVLNVDHFQIGQFVNITGKSIGKGFSGNHKRHKFKRGPMTHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAKTITVSKLKILGIDLKNNLLILKGSVPGKPGNLIKIIPS 195          
BLAST of mRNA_E-siliculosus-1a_F_contig10923.643.1 vs. uniprot
Match: A0A8E6D6E5_9PHAE (50S ribosomal protein L3, chloroplastic n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E6D6E5_9PHAE)

HSP 1 Score: 195 bits (496), Expect = 6.970e-60
Identity = 138/207 (66.67%), Postives = 164/207 (79.23%), Query Frame = 1
Query:    4 VSIGIFGNKIGMTQIFDKNGLALPVTVVSVGPCFITQLKTEKTNGYDAIQIGYSKGHTSKFSKAELGHLEKNGLSPXXXXXEYKVNXXKNYSLXXXXXXXXXXXXXXXXXTGKSIGKGFSGNQKRHKFKRGPMTHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSKLEILGIDSKQNLLILKGSVPGKPGNLLNIINSK 624
            +SIGIFG KIG TQ+F   GLA+PVTV+  GPC +TQLK+ + +GY+AIQIGYS+ + +KF + +LGHL+KN L       EYK+   + YS+   XXXXXXXXXXXXX TGKS+GKGFSGNQKRH FKRGPMTHGS  XXXXXXXXXXXXXXXXXXXXXXXX       TVS +++LGIDSKQNLL+L+GSVPGKPGNLL I+ S+
Sbjct:    1 MSIGIFGTKIGTTQVFSATGLAVPVTVIHAGPCLVTQLKSHQKDGYNAIQIGYSERNFNKFRRPQLGHLKKNKLPLLQHLGEYKILPTETYSVGQQXXXXXXXXXXXXXVTGKSLGKGFSGNQKRHHFKRGPMTHGSKNXXXXXXXXXXXXXXXXXXXXXXXXRLGGKKTTVSNVKVLGIDSKQNLLVLQGSVPGKPGNLLRIVVSR 207          
BLAST of mRNA_E-siliculosus-1a_F_contig10923.643.1 vs. uniprot
Match: A0A7S6ZPA7_9STRA (50S ribosomal protein L3, chloroplastic n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6ZPA7_9STRA)

HSP 1 Score: 191 bits (484), Expect = 4.580e-58
Identity = 122/206 (59.22%), Postives = 144/206 (69.90%), Query Frame = 1
Query:    4 VSIGIFGNKIGMTQIFDKNGLALPVTVVSVGPCFITQLKTEKTNGYDAIQIGYSKGHTSKFSKAELGHLEKNGLSPXXXXXEYKVNXXKNYSLXXXXXXXXXXXXXXXXXTGKSIGKGFSGNQKRHKFKRGPMTHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSKLEILGIDSKQNLLILKGSVPGKPGNLLNIINS 621
            +SIGI GNKIGMTQIFD+ GL +PVTV+ VGPC ITQ+KT + NGY+AIQ+GYS+    K +K + GHL+K G  P     EYKV+    + L                 +G+SIGKGFSGNQKRH FKRGPMTH  XXXXXXXXXXXXXXXXXXXXXX           T+SKL I+GID  +NLLI+KG+VPGKPGNLLNI+ S
Sbjct:    1 MSIGILGNKIGMTQIFDEEGLTIPVTVIRVGPCKITQIKTHRLNGYNAIQLGYSQVKPEKLTKPKHGHLKKVGCFPLYHLREYKVSKIDKFLLGETLTVDIFKIGQYVNISGQSIGKGFSGNQKRHNFKRGPMTHXXXXXXXXXXXXXXXXXXXXXXXXKMAGQYGAKKITISKLRIIGIDKTRNLLIIKGNVPGKPGNLLNIVGS 206          
BLAST of mRNA_E-siliculosus-1a_F_contig10923.643.1 vs. uniprot
Match: A0A514CPW3_9STRA (50S ribosomal protein L3, chloroplastic n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A514CPW3_9STRA)

HSP 1 Score: 188 bits (478), Expect = 3.830e-57
Identity = 102/205 (49.76%), Postives = 125/205 (60.98%), Query Frame = 1
Query:   10 IGIFGNKIGMTQIFDKNGLALPVTVVSVGPCFITQLKTEKTNGYDAIQIGYSKGHTSKFSKAELGHLEKNGLSPXXXXXEYKVNXXKNYSLXXXXXXXXXXXXXXXXXTGKSIGKGFSGNQKRHKFKRGPMTHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSKLEILGIDSKQNLLILKGSVPGKPGNLLNIINSK 624
            +GI GNK+GMTQIF ++G A PVTV+ VGPC +TQ+KT +T+GY+AIQIGY    T   +K ELGHL+K+ + P     EY      +++L XX  X           +GKSIGKGFSGNQKRH F RGPMTHGS                                 TVSKLE+L IDSK+NLLI+KGSVPGKPGNLL+I  +K
Sbjct:    2 LGILGNKVGMTQIFTEDGSANPVTVIKVGPCVVTQIKTIETDGYNAIQIGYQNSSTKHLTKPELGHLKKSQIQPLRYLKEYXXXEVNDFTLGXXINXQNFKEGDYVDISGKSIGKGFSGNQKRHNFSRGPMTHGSKNHREPGSIGQGSTPGRVFPGKKMAGQLGGKTTTVSKLEVLKIDSKENLLIVKGSVPGKPGNLLSIKPTK 206          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10923.643.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D1J752_ECTSI8.910e-9298.5550S ribosomal protein L3, chloroplastic n=9 Tax=Ec... [more]
A0A1L2F1Q4_9PHAE1.070e-6979.90Ribosomal protein L3 n=1 Tax=Coccophora langsdorfi... [more]
D1GJT2_FUCVE2.080e-6969.4650S ribosomal protein L3, chloroplastic n=3 Tax=Fu... [more]
A0A0R6MC27_UNDPI3.890e-6982.5650S ribosomal protein L3, chloroplastic n=28 Tax=L... [more]
A0A8F0JZG8_9PHAE9.180e-6378.76Ribosomal protein L3 n=1 Tax=Desmarestia aculeata ... [more]
A0A8F0F776_9PHAE1.300e-6279.08Ribosomal protein L3 n=1 Tax=Protohalopteris sp. T... [more]
A0A8F0JYJ1_9PHAE2.620e-6269.74Ribosomal protein L3 n=1 Tax=Chorda asiatica TaxID... [more]
A0A8E6D6E5_9PHAE6.970e-6066.6750S ribosomal protein L3, chloroplastic n=1 Tax=Is... [more]
A0A7S6ZPA7_9STRA4.580e-5859.2250S ribosomal protein L3, chloroplastic n=1 Tax=Sc... [more]
A0A514CPW3_9STRA3.830e-5749.7650S ribosomal protein L3, chloroplastic n=1 Tax=Rh... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig10923contigE-siliculosus-1a_F_contig10923:1429..2055 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop1
Cds size627
Model size627
Exons1
Hectar predicted targeting categoryother localisation
Best tax levelEukaryota
COG Functional cat.J
EggNOG OGsCOG0087@1,KOG3141@2759
EggNOG free text desc.structural constituent of ribosome
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009941,GO:0016020,GO:0031967,GO:0031975,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464
KEGG ModuleM00178,M00179
KEGG Pathwayko03010,map03010
KEGG koko:K02906
Preferred namerpl3
Seed eggNOG ortholog2880.D1J752
Seed ortholog evalue7.5e-72
Seed ortholog score276.9
Taxonomic scopeEukaryota
BRITEbr01610,ko00000,ko00001,ko00002,ko03011
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927594.7346644-CDS-E-siliculosus-1a_F_contig10923:1428..20551622927594.7346644-CDS-E-siliculosus-1a_F_contig10923:1428..2055Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10923 1429..2055 -
1696318603.061053-CDS-E-siliculosus-1a_F_contig10923:1428..20551696318603.061053-CDS-E-siliculosus-1a_F_contig10923:1428..2055Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig10923 1429..2055 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig10923.643.1prot_E-siliculosus-1a_F_contig10923.643.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig10923 1429..2055 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig10923.643.1

>prot_E-siliculosus-1a_F_contig10923.643.1 ID=prot_E-siliculosus-1a_F_contig10923.643.1|Name=mRNA_E-siliculosus-1a_F_contig10923.643.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=209bp
LVSIGIFGNKIGMTQIFDKNGLALPVTVVSVGPCFITQLKTEKTNGYDAI
QIGYSKGHTSKFSKAELGHLEKNGLSPLYHLCEYKVNDLKNYSLGQILTV
DNFQVGQFVNVTGKSIGKGFSGNQKRHKFKRGPMTHGSKNHRAPGSIGPG
TTPGRVFPGKLMAGQLGAKKITVSKLEILGIDSKQNLLILKGSVPGKPGN
LLNIINSK*
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mRNA from alignment at E-siliculosus-1a_F_contig10923:1429..2055-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig10923.643.1 ID=mRNA_E-siliculosus-1a_F_contig10923.643.1|Name=mRNA_E-siliculosus-1a_F_contig10923.643.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=627bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10923:1429..2055- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CTTGTGTCTATTGGAATATTCGGGAATAAAATTGGGATGACACAAATTTT TGATAAAAATGGTTTAGCTTTACCAGTTACTGTTGTGAGTGTCGGGCCTT GTTTTATCACGCAACTTAAAACAGAAAAAACTAACGGTTACGATGCTATT CAAATTGGTTATTCAAAAGGTCATACTTCTAAATTTAGCAAAGCAGAATT AGGACATTTAGAAAAGAATGGGTTATCACCATTATATCATTTATGTGAGT ATAAAGTAAACGATTTAAAAAATTATTCATTAGGACAAATATTAACTGTA GATAATTTTCAAGTTGGTCAATTTGTAAATGTTACAGGTAAATCAATCGG AAAAGGTTTTAGTGGGAATCAAAAACGGCATAAATTTAAGCGTGGGCCGA TGACTCATGGTTCAAAAAATCATAGGGCTCCAGGTTCTATTGGACCCGGA ACTACTCCAGGTAGAGTATTTCCTGGGAAACTAATGGCTGGACAACTTGG AGCAAAAAAAATTACTGTGTCAAAATTAGAAATTTTAGGTATTGATAGTA AACAGAACCTATTAATTTTAAAAGGTAGTGTACCTGGTAAACCAGGAAAC TTATTGAATATTATTAATTCAAAATAA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10923:1429..2055-

>mRNA_E-siliculosus-1a_F_contig10923.643.1 ID=mRNA_E-siliculosus-1a_F_contig10923.643.1|Name=mRNA_E-siliculosus-1a_F_contig10923.643.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1254bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10923:1429..2055- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CTTGTGTCTATTGGAATATTCGGGAATAAAATTGGGATGACACAAATTTT
TGATAAAAATGGTTTAGCTTTACCAGTTACTGTTGTGAGTGTCGGGCCTT
GTTTTATCACGCAACTTAAAACAGAAAAAACTAACGGTTACGATGCTATT
CAAATTGGTTATTCAAAAGGTCATACTTCTAAATTTAGCAAAGCAGAATT
AGGACATTTAGAAAAGAATGGGTTATCACCATTATATCATTTATGTGAGT
ATAAAGTAAACGATTTAAAAAATTATTCATTAGGACAAATATTAACTGTA
GATAATTTTCAAGTTGGTCAATTTGTAAATGTTACAGGTAAATCAATCGG
AAAAGGTTTTAGTGGGAATCAAAAACGGCATAAATTTAAGCGTGGGCCGA
TGACTCATGGTTCAAAAAATCATAGGGCTCCAGGTTCTATTGGACCCGGA
ACTACTCCAGGTAGAGTATTTCCTGGGAAACTAATGGCTGGACAACTTGG
AGCAAAAAAAATTACTGTGTCAAAATTAGAAATTTTAGGTATTGATAGTA
AACAGAACCTATTAATTTTAAAAGGTAGTGTACCTGGTAAACCAGGAAAC
TTATTGAATATTATTAATTCAAAATAACTTGTGTCTATTGGAATATTCGG
GAATAAAATTGGGATGACACAAATTTTTGATAAAAATGGTTTAGCTTTAC
CAGTTACTGTTGTGAGTGTCGGGCCTTGTTTTATCACGCAACTTAAAACA
GAAAAAACTAACGGTTACGATGCTATTCAAATTGGTTATTCAAAAGGTCA
TACTTCTAAATTTAGCAAAGCAGAATTAGGACATTTAGAAAAGAATGGGT
TATCACCATTATATCATTTATGTGAGTATAAAGTAAACGATTTAAAAAAT
TATTCATTAGGACAAATATTAACTGTAGATAATTTTCAAGTTGGTCAATT
TGTAAATGTTACAGGTAAATCAATCGGAAAAGGTTTTAGTGGGAATCAAA
AACGGCATAAATTTAAGCGTGGGCCGATGACTCATGGTTCAAAAAATCAT
AGGGCTCCAGGTTCTATTGGACCCGGAACTACTCCAGGTAGAGTATTTCC
TGGGAAACTAATGGCTGGACAACTTGGAGCAAAAAAAATTACTGTGTCAA
AATTAGAAATTTTAGGTATTGATAGTAAACAGAACCTATTAATTTTAAAA
GGTAGTGTACCTGGTAAACCAGGAAACTTATTGAATATTATTAATTCAAA
ATAA
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