mRNA_E-siliculosus-1a_F_contig109.615.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_E-siliculosus-1a_F_contig109.615.1
Unique Name	mRNA_E-siliculosus-1a_F_contig109.615.1
Type	mRNA
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig109.615.1 vs. uniprot
Match: D7FKU9_ECTSI (Derlin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKU9_ECTSI)

HSP 1 Score: 683 bits (1762), Expect = 3.960e-247
Identity = 354/374 (94.65%), Postives = 359/374 (95.99%), Query Frame = 1

Query:    1 MRAASPLALTPLLLVASLASVADGSLGINTAGARPPAISSVWTRRRDSQPSRVGLHRKHSSLDLVARLRGGVKRATVKADDEDDDADENDGMDAGPGALSTLAGVFKNMPPATRVYVLLLMVITAVDVSVGKAIDSGNTFSMDWGRTVKGLELWRPLTSLVYLGPLSMSWLTNVYFLTQHGTRLELVSGTAEQVIFLLVVGSLLLFVGPLIGMPLLSTSMVAANTYVSARIEPLGVVQFQFLKIPMWTLPFAQMGAAVLQAEGSPLAAIPHFVGILCGHVYHFFTVVHPLMGAKRRLGAPGWMKRRLDGEDNPNFMETPDEPAPPRGRKIGAGKKTASKSKTRGTPKSGSSGSKKGGGKARPVPDFPTADGGCS 1122
            MRAASPLALTPLLLVASLASVADGSLGINTAGARPPAISSVWTRRRDS PSRVGLHRKH SLDLVARLRGGVKRATVKADDEDDDA      DAGPGALS L GVFKNMPPATR YVLLLMVITAVDVSVGKAIDSGNTFSMDWGRTVKGLELWRPLTSLVYLGPLSMSWLTNVYFLTQHGTRLELVSGTAEQVIFLLVVGSLLLF+GPLIGMPLLSTSMVAA+TYVSAR++PLG VQFQFL+IPMWTLPFAQMGAAVLQAEGSPLAAIPHFVGILCGHVYHFFTVVHPLMGAKRRLGAPGWMKRRLDG DNPNFMETPDEPA PRGRKIGAGKKTASKSKTRGT KSGSSGSKKGGGKARPVPDFPTADGGCS
Sbjct:    1 MRAASPLALTPLLLVASLASVADGSLGINTAGARPPAISSVWTRRRDSHPSRVGLHRKHLSLDLVARLRGGVKRATVKADDEDDDAXXXXXXDAGPGALSALTGVFKNMPPATRAYVLLLMVITAVDVSVGKAIDSGNTFSMDWGRTVKGLELWRPLTSLVYLGPLSMSWLTNVYFLTQHGTRLELVSGTAEQVIFLLVVGSLLLFLGPLIGMPLLSTSMVAAHTYVSARMDPLGAVQFQFLRIPMWTLPFAQMGAAVLQAEGSPLAAIPHFVGILCGHVYHFFTVVHPLMGAKRRLGAPGWMKRRLDGGDNPNFMETPDEPAAPRGRKIGAGKKTASKSKTRGTSKSGSSGSKKGGGKARPVPDFPTADGGCS 374

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BLAST of mRNA_E-siliculosus-1a_F_contig109.615.1 vs. uniprot
Match: A0A6U1QM22_9STRA (Derlin n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1QM22_9STRA)

HSP 1 Score: 184 bits (468), Expect = 1.350e-51
Identity = 110/283 (38.87%), Postives = 167/283 (59.01%), Query Frame = 1

Query:  109 AISSVWTRRR--DSQPSRVGLHRKHSS------LDL-VARLRGGVKRATVKADDEDDDADENDGMDAGPGALSTLAGVFKNMPPATRVYVLLLMVITAVDVSVGKAIDSGNTFSMDWGRTVKGLELWRPLTSLVYLGPLSMSWLTNVYFLTQHGTRLELVSGTAEQVIFLLVVGSLLLFVGPLIGMPLLSTSMVAANTYVSARIEPLGVVQFQF--LKIPMWTLPFAQMGAAVLQAEGSPLAAIPHFVGILCGHVYHFFTVVHPLMGAKRRLGAPGWMKRRLD 924
            A+SSV T     D + + + +  K SS       DL + R+RGGVK+AT K ++ ++D          P   + +A  FKN+ PATRVY+ + +V+T V ++    +D+    S++  RT K LE+WRP+TS  ++GP SM    N+YFL ++G  LE   GT + V FL+    LL  +G ++G P +S+S++ A  +  +R++P+ +V   F  L +P W LPFA MG  +LQA+ S  A IPH  G L GH YHFF  ++PL+G ++ L AP ++KR LD
Sbjct:   16 ALSSVATASHFTDHRYTSLSILSKQSSSLAKNTFDLDILRIRGGVKKATPKEEEAEEDE---------PKKENAIAEAFKNVLPATRVYLSIALVLTVVHMT--GMVDAQQLLSLNLVRTFKNLEIWRPITSTCFMGPPSMQMAGNIYFLVKYGQELEANDGTLQHVFFLMTQLVLLSILGGVLGAPFMSSSLITAQLWCCSRLDPMSMVGVGFMGLAVPHWLLPFALMGIDILQAQ-SIAAGIPHVFGFLTGHFYHFFYRIYPLLGGRKLLEAPNFLKRMLD 286

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BLAST of mRNA_E-siliculosus-1a_F_contig109.615.1 vs. uniprot
Match: A0A836CEG4_9STRA (Tricarboxylate carrier-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEG4_9STRA)

HSP 1 Score: 183 bits (465), Expect = 4.860e-49
Identity = 98/192 (51.04%), Postives = 127/192 (66.15%), Query Frame = 1

Query:  400 IDSGNTFSMDWGRTVKGLELWRPLTSLVYLGPLSMSWLTNVYFLTQHGTRLELVSGTAEQVIFLLVVGSLLLFVGPLIGMPLLSTSMVAANTYVSARIEPLGVVQFQF-LKIPMWTLPFAQMGAAVLQAEGSPLAAIPHFVGILCGHVYHFFTVVHPLMGAKRRLGAPGWMKRRLDGEDNP-NFMETPDEPA 969
            +D+   F   W RT+  LELWRPLT+ +YLGP+SM W TNVYFL  +G+ LE V+GTAEQ++FLL     +  +G LI +P++STS+++A  Y SAR++PLG V FQF L++P W LP+       LQA G   AAIPH VGIL GH Y F     PLMG +  L APGW++RR+DG     NFME P + A
Sbjct:    7 VDAKEVFVASWPRTILNLELWRPLTAALYLGPISMHWATNVYFLITYGSHLEAVNGTAEQIVFLLTAFVCVTILGALISLPVVSTSLISACVYGSARVDPLGSVPFQFGLQMPRWLLPYGLAVVDFLQA-GKIEAAIPHAVGILAGHFYTFNRNTLPLMGGRDWLRAPGWLQRRVDGGGGATNFMEKPKKTA 197

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BLAST of mRNA_E-siliculosus-1a_F_contig109.615.1 vs. uniprot
Match: A0A7S1XM51_9STRA (Derlin n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XM51_9STRA)

HSP 1 Score: 152 bits (385), Expect = 1.280e-39
Identity = 107/304 (35.20%), Postives = 160/304 (52.63%), Query Frame = 1

Query:   25 LTPLLLVASLASVADGSLGINTAGARPPAISSVWTRRRDSQPSRVGLHRKHSSLDLVARLRGGVKRATVKADDEDDDADENDGMDAGPGALSTLAGVFKNMPPATRVYVLLLMVITAVDVSVGKAIDSGNTFSMDWGRTVKGLELWRPLTSLVYLGPLSMSWLTNVYFLTQHGTRLELVSGTAEQVIFLLVVGSLLLFVGPLIGMPLLSTSMVAANTYVSARIEPLGVVQFQFL--KIPMWTLPFAQMGAAVLQAEGSPLAAIPHFVGILCGHVYHFFTVVHPLMGAKRRLGAPGWMKRRLDGE 930
            L  LLL+A+ A++A    G    G         W         +VGL      L  V  +RGG K+   K         E  G+    GA +     +K + PATR+Y+ + M +T V  +    +   N  ++D   T+  L+ WRPLTS  +LGPL+M+  T++YF+   G  LE   GTA+ V+FL+   +LL  +GP++GMP  S+S+V+A  +VS R +P+  +   F+   +  W +PFA+M    LQA+ S  AA+PH +G L GH YHF T + PL+G    L AP  MK+ L+G+
Sbjct:    4 LAQLLLLAACAALAGADAGRTRIGR-----GVGWGAAGRHGLGQVGLSASGRGLAAVPAIRGGAKKK--KXXXXXXXXPEAKGI----GAFAKKE--YKKLKPATRLYLSVAMALTMVATA---GLVDPNLMALDPLATIFNLQFWRPLTSAFFLGPLNMNMATSLYFVAMFGQELEKDKGTADYVVFLISQITLLTLLGPMLGMPYTSSSLVSAALWVSCRRKPMQKMGLGFMGMSVEAWLVPFARMVMDSLQAQ-SGAAALPHMLGFLTGHCYHFVTKIWPLVGGTNWLDAPPRMKKMLNGK 290

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BLAST of mRNA_E-siliculosus-1a_F_contig109.615.1 vs. uniprot
Match: A0A1Z5K2V8_FISSO (Derlin n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K2V8_FISSO)

HSP 1 Score: 151 bits (382), Expect = 3.110e-39
Identity = 102/286 (35.66%), Postives = 154/286 (53.85%), Query Frame = 1

Query:  178 SSLDLVARLRGGV-------KRATVKADDEDDDADENDGMDAGPGALSTLAGVFKNMPPATRVYVLLLMVITAVDVSVGKAIDSGNTFSMDWGRTVKGLELWRPLTSLVYLGPLSMSWLTNVYFLTQHGTRLELVSGTAEQVIFLLVVGSLLLFVGPLIGMPLLSTSMVAANTYVSARIEPLGVVQFQFLKIPMWTLPFAQMGAAVLQAEGSPLAAIPHFVGILCGHVYHFFTVVHP-LMGAKRRLGAPGWMKRRLDGEDNPNFMETPDEPAPPR----GRKIGAG 999
            +S   +  LRGG        K AT K      DA E         A++     +K + P TR+Y+ L+ V T + + +G+ +  G   ++D  R + GL+LWRP+T+  +LGP S+SWL N Y+L Q+G+ LE   GTA+  +FLL    LL     L+G P  + SM+ +  +V +R  P   V++    +P W+LP+  M + VLQA+ SP+AA+PH +GIL GH YHF   + P L   +  L AP ++ +RLD  D     E+  +    R    GRK+G+G
Sbjct:   42 NSNHRLIELRGGASKRKVAQKTATGKRKVTKKDAPEE------KSAVADTLQKYKKILPLTRIYITLVGVATLLGLVLGEELTQG-LLALDPMRVLYGLQLWRPITAATFLGPPSISWLLNGYYLFQYGSSLERAYGTAQHSVFLLSQLVLLSIFSTLVGQPFFANSMITSMLHVLSRSMPHQKVKWLVFTVPYWSLPYGLMASDVLQAQ-SPMAALPHIMGILTGHFYHFHKHIWPKLEQGQDWLVAPEFLSKRLDPADKDAGKESVSKALKLRKKNKGRKLGSG 319

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BLAST of mRNA_E-siliculosus-1a_F_contig109.615.1 vs. uniprot
Match: A0A6U6GRJ3_9STRA (Derlin n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6GRJ3_9STRA)

HSP 1 Score: 148 bits (374), Expect = 4.870e-38
Identity = 84/244 (34.43%), Postives = 140/244 (57.38%), Query Frame = 1

Query:  286 PGALSTLAGVFKNMPPATRVYVLLLMVITAVDVSVGKAIDSGNTFSMDWGRTVKGLELWRPLTSLVYLGPLSMSWLTNVYFLTQHGTRLELVSGTAEQVIFLLVVGSLLLFVGPLIGMPLLSTSMVAANTYVSARIEPLGVVQFQFLKIPMWTLPFAQMGAAVLQAEGSPLAAIPHFVGILCGHVYHFFTVVHPLMGAKRRLGAPGWMKRRLDGEDNPNFMETPDEPAPPRGRKIGAGKKTASK 1017
            P A+S     +K + P TR+Y+ ++ V+T + + +G+ +  G   ++D  R + GLELWRP T+  +LGP S+ WL + Y+L ++G+ LE   GTA+ ++FL+    LL  +    G P  +  ++ A  +V +R  P   V++    +P W+LP+  M + VLQA+ SP+AA+PH +GIL GH Y F+  + P MG +  L AP ++ + LD     +  ++ +  A  + RK G G+K   K
Sbjct:   88 PSAISDTMQKYKAILPLTRIYITMIGVVTLMGLVLGEELAQG-VLALDPIRVMYGLELWRPFTAACFLGPPSIGWLMSAYYLFEYGSSLERAYGTAQHLVFLIWQIVLLTVLSAFFGQPFFAQPVITAMLHVLSRSMPKQKVKWLIFNVPYWSLPYGLMASDVLQAQ-SPMAALPHIMGILTGHFYFFYKFIWPKMGGEDWLTAPDFLSQWLDPNARSDSKKSVN--AALKARKKGKGRKLGGK 327

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BLAST of mRNA_E-siliculosus-1a_F_contig109.615.1 vs. uniprot
Match: A0A7S2P7M0_9STRA (Derlin n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P7M0_9STRA)

HSP 1 Score: 147 bits (370), Expect = 1.900e-37
Identity = 87/239 (36.40%), Postives = 138/239 (57.74%), Query Frame = 1

Query:  295 LSTLAGVFKNMPPATRVYVLLLMVITAVDVSVGKAIDSGNTFSM--DWGRTVKGLELWRPLTSLVYLGPLSMSWLTNVYFLTQHGTRLELVSGTAEQVIFLLVVGSLLLFVGPLIGMPLLSTSMVAANTYVSARIEPLGVVQFQFLKIPMWTLPFAQMGAAVLQAEGSPLAAIPHFVGILCGHVYHFFTVVHPLMGAKRRLGAPGWMKRRLDGEDNPNFMETPDEPAPPRGRKIGAGKK 1005
            LS+    + +M P TRVY+ ++ ++T + + VG   D G    M  D  R + GLELWRP T+  +LGP S+ WL N Y+L ++G+ LE   G+A+ ++FLL    LL ++  +   P   +SM+ A  +V +R  P   V++    +P W+LP+  M + VLQ++ SP +A+PH +GIL GH YHF   + P +G +  L AP ++ +RLD +   +  +     A  +GRK G G+K
Sbjct:   91 LSSAMQKYHSMLPLTRVYITVVGIVTLLGLIVG---DEGAQMLMAFDMNRVLHGLELWRPFTAAAFLGPPSIGWLMNGYYLFEYGSSLERAYGSAQFLLFLLGQIFLLSWLSGIFAQPFFGSSMITAMLHVLSRSMPNQKVKWLIFTVPYWSLPYGLMASDVLQSQ-SPASALPHIIGILTGHFYHFHKFIWPKVGGEDWLVAPEFLSKRLDADAKRDVAKETISNAL-KGRKKGKGRK 324

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BLAST of mRNA_E-siliculosus-1a_F_contig109.615.1 vs. uniprot
Match: A0A7S4N1A3_9STRA (Derlin n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N1A3_9STRA)

HSP 1 Score: 143 bits (361), Expect = 3.580e-37
Identity = 81/234 (34.62%), Postives = 135/234 (57.69%), Query Frame = 1

Query:  316 FKNMPPATRVYVLLLMVITAVDVSVGKAIDSGNTFSMDWGRTVKGLELWRPLTSLVYLGPLSMSWLTNVYFLTQHGTRLELVSGTAEQVIFLLVVGSLLLFVGPLIGMPLLSTSMVAANTYVSARIEPLGVVQFQFLKIPMWTLPFAQMGAAVLQAEGSPLAAIPHFVGILCGHVYHFFTVVHPLMGAKRRLGAPGWMKRRLDGEDNPNFMETPDEPAPPRGRKIGAGKKTASK 1017
            +K   P TR+Y+ ++ V+T + + +G+ +  G   ++D  R + GLELWRP T+  +LGP S+ WL + Y+L ++G+ LE   GTA+ ++FL+    LL  +    G P  +  ++ A  +V +R  P   V++    +P W+LP+  M + VLQA+ SP+AA+PH +GIL GH Y F+  + P MG +  L AP ++ + LD     +  ++ +  A  + RK G G+K   K
Sbjct:    4 YKATLPLTRIYITMIGVVTLMGLVLGEELAQG-VLALDPIRVMYGLELWRPFTAACFLGPPSIGWLMSAYYLFEYGSSLERAYGTAQHLVFLIWQIVLLTVLSAFFGQPFFAQPVITAMLHVLSRSMPKQKVKWLIFNVPYWSLPYGLMASDVLQAQ-SPMAALPHIMGILTGHFYFFYKFIWPKMGGEDWLTAPDFLSQWLDPNARSDSKKSVN--AALKARKKGKGRKLGGK 233

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BLAST of mRNA_E-siliculosus-1a_F_contig109.615.1 vs. uniprot
Match: A0A7R9U412_9STRA (Derlin (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U412_9STRA)

HSP 1 Score: 144 bits (364), Expect = 1.380e-36
Identity = 85/207 (41.06%), Postives = 125/207 (60.39%), Query Frame = 1

Query:  316 FKNMPPATRVYVLLLMVITAVDVSVGKAIDSGNTFSMDWGRTVKGLELWRPLTSLVYLGPLSMSWLTNVYFLTQHGTRLELVSGTAEQVIFLLVVGSLLLFVGPLIGMPLLSTSMVAANTYVSARIEPLGVVQFQFLKIPM--WTLPFAQMGAAVLQAEGSPLAAIPHFVGILCGHVYHFFTVVHPLMGAKRRLGAPGWMKRRLDGE 930
            FK + PATR+Y+   + +T +       I + N  ++D    + GL+ WRPLTS ++LG L+M   T++YFL  +G  LE   GTA+ V+FLL    LL  + PL+GMP  S+S+V+A  +VS R  P+  +    + I M  W +PF +M    LQA+ +P+AA+PH +G + GH YHF T V PL+G K  L AP  MK+ L+G+
Sbjct:  106 FKKLRPATRLYITGALALTLLATF---GIVNPNMLALDPMAALLGLQFWRPLTSALFLGGLNMQMATSLYFLGMYGQELEKDRGTADYVVFLLTQVILLSVLAPLLGMPYTSSSVVSAALWVSCRRRPMQKLSLGVMGISMEAWLVPFGRMLIECLQAQ-NPIAALPHMLGFVSGHFYHFTTRVWPLLGGKDWLQAPPKMKKLLNGK 308

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BLAST of mRNA_E-siliculosus-1a_F_contig109.615.1 vs. uniprot
Match: B7FP36_PHATC (Derlin n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FP36_PHATC)

HSP 1 Score: 144 bits (363), Expect = 1.850e-36
Identity = 85/261 (32.57%), Postives = 136/261 (52.11%), Query Frame = 1

Query:  172 KHSSLDLVARLRGGVKRATVKADDEDDDADENDGMDAGPGALSTLAGVFKNMPPATRVYVLLLMVITAVDVSVGKAIDSGNTFSMDWGRTVKGLELWRPLTSLVYLGPLSMSWLTNVYFLTQHGTRLELVSGTAEQVIFLLVVGSLLLFVGPLIGMPLLSTSMVAANTYVSARIEPLGVVQFQFLKIPMWTLPFAQMGAAVLQAEGSPLAAIPHFVGILCGHVYHFFTVVHPLMGAKRRLGAPGWMKRRLDGEDNPNFMET 954
            K +SL+  +R   G K+    A ++               ALS     +K + P TR+Y+ ++ V T + +  G+     +  ++D  R   G E WRP T+  +LGP+S+ WL + Y+L ++G+ LE   GTA+  +FL+     L F+  L G P    SM+ A  +V +R  P   V++    +P W+LP+  M + VLQA+ S +AA+PH +GI+ GH YHF   + P  G +  L AP ++ RRLD +      E+
Sbjct:   62 KSASLNSKSRTATGKKKVGATAAEK-------------KSALSDTMQRYKRIRPLTRIYITMVGVATLISIIFGEEFTQ-SLLALDPTRAFYGFEFWRPFTAASFLGPISIGWLMSGYYLFEYGSSLERAYGTAQHFVFLMSQVFGLTFLSSLTGQPFFGQSMITAMLHVLSRAMPHQKVKWLIFTVPYWSLPYGLMASDVLQAQ-SAMAALPHILGIVSGHFYHFHKFIWPKKGGEDWLVAPDFLVRRLDPDSKDAARES 307

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig109.615.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig109.615.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FKU9_ECTSI	3.960e-247	94.65	Derlin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKU9_...	[more]
A0A6U1QM22_9STRA	1.350e-51	38.87	Derlin n=1 Tax=Fibrocapsa japonica TaxID=94617 Rep...	[more]
A0A836CEG4_9STRA	4.860e-49	51.04	Tricarboxylate carrier-domain-containing protein n...	[more]
A0A7S1XM51_9STRA	1.280e-39	35.20	Derlin n=1 Tax=Phaeomonas parva TaxID=124430 RepID...	[more]
A0A1Z5K2V8_FISSO	3.110e-39	35.66	Derlin n=1 Tax=Fistulifera solaris TaxID=1519565 R...	[more]
A0A6U6GRJ3_9STRA	4.870e-38	34.43	Derlin n=1 Tax=Odontella aurita TaxID=265563 RepID...	[more]
A0A7S2P7M0_9STRA	1.900e-37	36.40	Derlin n=1 Tax=Leptocylindrus danicus TaxID=163516...	[more]
A0A7S4N1A3_9STRA	3.580e-37	34.62	Derlin n=1 Tax=Odontella aurita TaxID=265563 RepID...	[more]
A0A7R9U412_9STRA	1.380e-36	41.06	Derlin (Fragment) n=1 Tax=Pinguiococcus pyrenoidos...	[more]
B7FP36_PHATC	1.850e-36	32.57	Derlin n=2 Tax=Phaeodactylum tricornutum TaxID=285...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig109	contig	E-siliculosus-1a_F_contig109:30197..34937 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Properties


Property Name	Value
Start	1
Stop	1
Cds size	1125
Model size	1125
Exons	8
Ec32 ortholog	Ec-17_001460.1
Ec32 ortholog description	Derlin
Hectar predicted targeting category	chloroplast
BRITE	ko00000,ko00001,ko00002
Best eggNOG OG	NA\|NA\|NA
Best tax level	Eukaryota
COG Functional cat.	I
EggNOG OGs	COG5291@1,KOG0858@2759
EggNOG free text desc.	ubiquitin-dependent ERAD pathway
KEGG Module	M00403
KEGG Pathway	ko04141,ko05014,map04141,map05014
KEGG ko	ko:K11519
Seed eggNOG ortholog	2880.D7FKU9
Seed ortholog evalue	7.4e-195
Seed ortholog score	686.4
Taxonomic scope	Eukaryota

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig109.615.1	prot_E-siliculosus-1a_F_contig109.615.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	polypeptide	E-siliculosus-1a_F_contig109 30197..34937 -

The following CDS feature(s) are a part of this mRNA:

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-siliculosus-1a_F_contig109:30197..34937-
coding sequence from alignment at E-siliculosus-1a_F_contig109:30197..34937-

protein sequence of mRNA_E-siliculosus-1a_F_contig109.615.1

>prot_E-siliculosus-1a_F_contig109.615.1 ID=prot_E-siliculosus-1a_F_contig109.615.1|Name=mRNA_E-siliculosus-1a_F_contig109.615.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=375bp
MRAASPLALTPLLLVASLASVADGSLGINTAGARPPAISSVWTRRRDSQP
SRVGLHRKHSSLDLVARLRGGVKRATVKADDEDDDADENDGMDAGPGALS
TLAGVFKNMPPATRVYVLLLMVITAVDVSVGKAIDSGNTFSMDWGRTVKG
LELWRPLTSLVYLGPLSMSWLTNVYFLTQHGTRLELVSGTAEQVIFLLVV
GSLLLFVGPLIGMPLLSTSMVAANTYVSARIEPLGVVQFQFLKIPMWTLP
FAQMGAAVLQAEGSPLAAIPHFVGILCGHVYHFFTVVHPLMGAKRRLGAP
GWMKRRLDGEDNPNFMETPDEPAPPRGRKIGAGKKTASKSKTRGTPKSGS
SGSKKGGGKARPVPDFPTADGGCS*

mRNA from alignment at E-siliculosus-1a_F_contig109:30197..34937-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-siliculosus-1a_F_contig109.615.1 ID=mRNA_E-siliculosus-1a_F_contig109.615.1|Name=mRNA_E-siliculosus-1a_F_contig109.615.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4741bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig109:30197..34937- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGAGAGCCGCTTCTCCGCTAGCGTTGACGCCCCTGCTCCTAGTGGCATC
ATTAGCGAGCGTGGCGGACGGGTCCTTGGGGATAAATACTGCCGGAGCAA
GACCGCCAGCGATCAGTTCAGTGAGTTGTATCAAATATGAAGCATAGTCT
GTGTGTAAGAGATAGCTGTACAACGGGCGCAGCGTGCACAGGGGAAAGAA
GCTTACGGGTAACGTGCGGTTGTGCAAGTTGTCCACGCGTAGATACGTTG
TAGACCGGCCGCTGCCGCTGCTGCGCGCTGGACGTACCGAGAATGTTCAT
TTTGTCGTCTTGACCACACCTTCCGGATACGCTGCCAGGGTTGCTGCTGT
GTGTGTTGTTACCACCACATTTATCGACAGCAATTCGATGTTGTCGGTGT
TTGCACACCAGTGCCGAGCAAACAGCCTCATAGAGTGGGACACGTTGTTT
TCAAGGATGCTTCTCCGAACCTACGGGAAGCAAGCGTATCTAGCTGGGCC
CATTCGGTATGATGGCGGTGGTATTGCTGAGAGGCACTACAGTAGTGCTA
TGCATTTACCATCCTGCTGCTGTCTTATCGATGGGCCAATGAGAAGAATT
ATCACGGGATCCGTACAAATAGGTCTAAAGGGCGTACGTACAGCCATTGT
GAGAGAAACGTGCGACTGCTGTACTGTGTAGTGTATGCATACAGTACAAC
GCAGAACGGCCTAAGAGCCAAAGAGCAGCAGGCGTAGTCTACAGGGACTC
ATGTGTGTTGCTTCATGTCTCGTGGGTTCCAACTTGTCTGCTGCTACCAT
GTACCGACATGCGGTAACGAAAGTTCTGATTGATCCCTAACACAGCAGGA
GTTGGTCAACGCATCCATCGATGGACACGCCAGGTTGTGTCCCTTTTCTG
TTGGCTTCTTAACCCTCCTAATACTGGAAGCCCAAATGAGGACACTTTGG
GGACACAGCACTAAAATCCCTACTGCACTGTAGCCACCCTAGGCTCCGCT
GTGTACAACGCACGGAGAACCCTTGGTCTATCATGCATGGCTGAGGTGGT
ACGCTGTGTGATATGCTCTGTGATGCCTGTCCTGGGCCTCTGACTTGCTG
TACACATCTCCCAACCCGCGTGCCCCCTAGGTCGTAAAACTGTACATCGC
CTGGCACTGGAAAACTTGCTGACTTGGCTTCAGTATGAAAGGTGTCCCCA
CGTGTTTTGGGGACGCTTTTCATACTGAAGCCAAGCCACCCTTCGTCTGG
CAAGGAGGGAGCTCAGATTCTTTGGAGGGAGTGTAGCCCCTCGACCAATG
GCTGACAAACATTTTGGAGACATTTTTTTTGCGGAGGGACTGGGTACTAG
GAGGGTTAACGCGTACAGTCATGTGCTGTTTGCCGAACAACAGTAACCGC
ATCTTTCCCCCGCCGATGCTCGACCTTCTCTCGCTTGTGCCTGTAGGTGT
GGACACGGCGGCGCGATTCACAACCATCCAGAGTGGGTTTGCATAGGAAG
CACTCGTCCTTGGACCTGGTGAGTTGTCAAGGTACTTGCTTGCTCAGCGT
ATGCGTCCGTATTGGGCCATGTGAGAACCGGTTGAAGCATGTTGCTAACT
CCACGCAATCGGTTTTTTTACGACACCAAGTTTTCGGCTTGGGCTCGAAG
AGCATGTACCCGGTGAGAGTTAATACGTAGTTCCTCCGACCGCGCTTGAT
TTTTGTTAGAAAATCTTCCGGATACATGGCGTGACATCACAGCAAGACCA
CCAGTTCGAGATGTTGCTCTGAGGGGATATGCTGAGGACTTTATTTTATA
GCATTGAGGGTTTGTTTTGTTTTTGCAGGTGGCGCGGCTGAGGGGAGGGG
TGAAACGTGCTACGGTGAAAGCAGACGACGAAGACGATGACGCCGATGAG
AACGACGGCATGGACGCAGGACCCGGGGCTCTATCGACTCTGGCGGGGGT
CTTCAAAAACGTAAGGATGTATCGATTATTGCGAAGAGTGTGAGTCGGCA
TCAAACTCTCTCGATTATTTTGTTTCCACATTATGTTGTTGGAGGGTGTT
TTCCTTCGATTGCGTTTGCCCCCAAGGCACGGACGATGTGTTTGTTTCCA
CTTTGGCGCTAGTTGGTTCCGACTCCGGCGGCACGGTCTCCCCTATGTTG
TGCGCGCTCTGCACTGCACTCCATCGCACTACAGATGCCACCGGCAACCC
GAGTTTACGTCCTTTTGCTGATGGTCATCACCGCGGTGGACGTATCCGTC
GGTAAGGCCATCGACTCGGGCAACACCTTTTCCATGGATTGGGGAAGGAC
TGTGAAGGTGACTCGGGGACTCCCATTGGAAGGGAATCGGATATGAACGT
TGATCACCAAGATTTTGCGTCGGGTGTACTCAACCCAACGCGGTTCGCTC
GGCTTTTGGTCATATGGAAATTCAGACATACGAAGTACATCATCATCATC
ATGGCGCTCTTGCCTACGGTATTTAATTGACGTGTTGCGGGGGCATTGCG
CAACGCCCTCGCCACTCTCTGCTTGAAGCAAGCGGGGGCACACCACCTTA
GGGTACCCATTTCAAGGCTATCGTTGTCAGTGGTAGGAAAGCAGCTTTTG
GGGTTCTCGTCGTACCGTTGCCACGGCATGTCGACGTGCGCTCCGTGGAA
AATCGAGCAACTTACCTTGTTTGTCCCCCTCTCACATGGTCCCTTGAAGG
GATTGGAGCTGTGGCGGCCTCTCACGTCGCTCGTGTACCTCGGGCCTCTG
TCGATGAGCTGGCTGACGAACGTGTACTTCCTGACGCAACACGGCACTCG
GTTGGAACTGGTTAGCGGGACGGCGGAGCAAGTAATATTCCTCCTCGTCG
TGGTGAGAGATTCAGTGTTGCCCCCAGGTATAAAGTGCAACAGCGATGTC
AGATGGTGCGACAAGGCTGCGCGCACTGATTGCCTGTGTAAGCTTGGCGC
ATGTGCGTCTTGTGTCGGTTGGACTAATGTACGATGTACATACGTACGGG
TACTTTATCCTGACACGTTGAAGGTATCAGTAATATGACGGCGGCGCATC
CTTCCCGTACCTATCATCGGGAGAGTTATGTGTTGTTCGTGAGCAGGTTT
ACGAAGTTGTACTCAATCGCATGACGTCCAACAGTATTGTAACCCAAGTA
TGCTCAGAAACCCAGCTCAGATGAGAATATGCCCTCATCACGCGAAACAC
GCGCCGGTCTTGTGAGGCGTTCGAGAATACATTCAGCTTGTCCGATGGAC
CTATGCATATCTCACTCGGCCCTGAACACCGTTGGTGAGCATTCCTCTCG
GGACTTCACCCCGTCGATTGTGCTGCTGCCGATGTGTTGACAATTCAAGG
GCTCGTTGCTGCTGTTCGTGGGGCCATTGATTGGCATGCCGTTGTTGTCC
ACCTCCATGGTGGCTGCGAATACGTACGTGTCTGCGAGGTGAGGCAATCC
AGTTCTGCCAGCAGAAACATGTTTTTCGGGGCATTTTGCTTTCGTAGCTT
ACAAGTACATGCGCGAATATTTTCTTACTCATTTAAGTGAGTAGGGGGCG
GGGTAGGTGTCGATGTTGTGGCTGTGGGGGTGTTTTGGGGGGAGACATGC
TCGAGCGCACGAGGTGTAGAACTCCCCAGTTGTGCGCAACAAATGCGCGC
TGGTGGTCTAGAGCCGTATCGCTGGCACCCTTCTCTTCCCGTGCCTTCGT
GCCTCATCATCGTCGCTTTGGTTCACTGCGGTAGATGGGTCACCAATCGG
AACATTGTAGGCTGCTGCAGATTGCTGTACTGGTGTGTCGACAGCACCGT
CATATCTCACCTGGTTATTGCTTCTTTTTTTTCTTTTCTCAGGATCGAAC
CTTTAGGGGTCGTGCAGTTCCAGTTCCTCAAGATTCCCATGTGGACGCTG
CCGTTCGCACAAATGGGAGGTGAGACATGCGGGAGTCGGCCGACGGTTAT
CATGCTTGTCGTGACGATGGTCGTGCTCAGCGAGTCGATTCCTCATAGCC
GTGTAGTGCCGTCTAATCCAACATATTTATTGTGCGGTAGAAGAGGAGGG
TTACACAACTTGAATGGGTTTGCATCCGGCAATGGCCGTCATGGACGTGG
GGCAACTTTTGACAAGATGTGCGATAGTACAGTAGTAGAGCTTTTAAGGC
GCGCGCGGATTTAACACCTGTGTGCATTGGGGTCCATACGCAATTATTTG
CTTCGGAAACCCGATGCGGGATCCAAGATCAGCACAGAACGATTCCTTGG
TTTTCAGTTCTTTGTTCGGAACCTACAATCTCTCGTGGCAGTGCTGTGGC
TTGTTTGTAGAAGACGTGCCCAGTTTTTAACGGAAACCCTTGGGGGCTGC
AATGTTAACCGTGTACATGTATGCACCAACAGCCGCCGTGCTCCAGGCGG
AGGGGAGCCCGTTGGCCGCCATTCCTCATTTCGTGGGGATCTTGTGCGGT
CACGTGTACCACTTCTTCACTGTGGTGCACCCGCTGATGGGGGCTAAGCG
TCGTCTGGGAGCTCCAGGGTGGATGAAGAGGCGCTTGGACGGCGAGGACA
ACCCTAACTTCATGGAGACGCCAGATGAGCCCGCACCACCACGGGGACGA
AAAATCGGCGCCGGCAAAAAGACGGCCAGCAAGAGCAAGACCAGAGGGAC
CCCCAAATCGGGATCGAGCGGCAGCAAGAAGGGTGGCGGCAAAGCTAGAC
CAGTACCAGACTTCCCTACAGCCGACGGGGGCTGTTCGTAG

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig109:30197..34937-

>mRNA_E-siliculosus-1a_F_contig109.615.1 ID=mRNA_E-siliculosus-1a_F_contig109.615.1|Name=mRNA_E-siliculosus-1a_F_contig109.615.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2250bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig109:30197..34937- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGAGAGCCGCTTCTCCGCTAGCGTTGACGCCCCTGCTCCTAGTGGCATC
ATTAGCGAGCGTGGCGGACGGGTCCTTGGGGATAAATACTGCCGGAGCAA
GACCGCCAGCGATCAGTTCAATGAGAGCCGCTTCTCCGCTAGCGTTGACG
CCCCTGCTCCTAGTGGCATCATTAGCGAGCGTGGCGGACGGGTCCTTGGG
GATAAATACTGCCGGAGCAAGACCGCCAGCGATCAGTTCAGTGTGGACAC
GGCGGCGCGATTCACAACCATCCAGAGTGGGTTTGCATAGGAAGCACTCG
TCCTTGGACCTGGTGTGGACACGGCGGCGCGATTCACAACCATCCAGAGT
GGGTTTGCATAGGAAGCACTCGTCCTTGGACCTGGTGGCGCGGCTGAGGG
GAGGGGTGAAACGTGCTACGGTGAAAGCAGACGACGAAGACGATGACGCC
GATGAGAACGACGGCATGGACGCAGGACCCGGGGCTCTATCGACTCTGGC
GGGGGTCTTCAAAAACGTGGCGCGGCTGAGGGGAGGGGTGAAACGTGCTA
CGGTGAAAGCAGACGACGAAGACGATGACGCCGATGAGAACGACGGCATG
GACGCAGGACCCGGGGCTCTATCGACTCTGGCGGGGGTCTTCAAAAACAT
GCCACCGGCAACCCGAGTTTACGTCCTTTTGCTGATGGTCATCACCGCGG
TGGACGTATCCGTCGGTAAGGCCATCGACTCGGGCAACACCTTTTCCATG
GATTGGGGAAGGACTGTGAAGATGCCACCGGCAACCCGAGTTTACGTCCT
TTTGCTGATGGTCATCACCGCGGTGGACGTATCCGTCGGTAAGGCCATCG
ACTCGGGCAACACCTTTTCCATGGATTGGGGAAGGACTGTGAAGGGATTG
GAGCTGTGGCGGCCTCTCACGTCGCTCGTGTACCTCGGGCCTCTGTCGAT
GAGCTGGCTGACGAACGTGTACTTCCTGACGCAACACGGCACTCGGTTGG
AACTGGTTAGCGGGACGGCGGAGCAAGTAATATTCCTCCTCGTCGTGGGA
TTGGAGCTGTGGCGGCCTCTCACGTCGCTCGTGTACCTCGGGCCTCTGTC
GATGAGCTGGCTGACGAACGTGTACTTCCTGACGCAACACGGCACTCGGT
TGGAACTGGTTAGCGGGACGGCGGAGCAAGTAATATTCCTCCTCGTCGTG
GGCTCGTTGCTGCTGTTCGTGGGGCCATTGATTGGCATGCCGTTGTTGTC
CACCTCCATGGTGGCTGCGAATACGTACGTGTCTGCGAGGGCTCGTTGCT
GCTGTTCGTGGGGCCATTGATTGGCATGCCGTTGTTGTCCACCTCCATGG
TGGCTGCGAATACGTACGTGTCTGCGAGGATCGAACCTTTAGGGGTCGTG
CAGTTCCAGTTCCTCAAGATTCCCATGTGGACGCTGCCGTTCGCACAAAT
GGGAGGATCGAACCTTTAGGGGTCGTGCAGTTCCAGTTCCTCAAGATTCC
CATGTGGACGCTGCCGTTCGCACAAATGGGAGCCGCCGTGCTCCAGGCGG
AGGGGAGCCCGTTGGCCGCCATTCCTCATTTCGTGGGGATCTTGTGCGGT
CACGTGTACCACTTCTTCACTGTGGTGCACCCGCTGATGGGGGCTAAGCG
TCGTCTGGGAGCTCCAGGGTGGATGAAGAGGCGCTTGGACGGCGAGGACA
ACCCTAACTTCATGGAGACGCCAGATGAGCCCGCACCACCACGGGGACGA
AAAATCGGCGCCGGCAAAAAGACGGCCAGCAAGAGCAAGACCAGAGGGAC
CCCCAAATCGGGATCGAGCGGCAGCAAGAAGGGTGGCGGCAAAGCTAGAC
CAGTACCAGACTTCCCTACAGCCGACGGGGGCTGTTCGTAGCCGCCGTGC
TCCAGGCGGAGGGGAGCCCGTTGGCCGCCATTCCTCATTTCGTGGGGATC
TTGTGCGGTCACGTGTACCACTTCTTCACTGTGGTGCACCCGCTGATGGG
GGCTAAGCGTCGTCTGGGAGCTCCAGGGTGGATGAAGAGGCGCTTGGACG
GCGAGGACAACCCTAACTTCATGGAGACGCCAGATGAGCCCGCACCACCA
CGGGGACGAAAAATCGGCGCCGGCAAAAAGACGGCCAGCAAGAGCAAGAC
CAGAGGGACCCCCAAATCGGGATCGAGCGGCAGCAAGAAGGGTGGCGGCA
AAGCTAGACCAGTACCAGACTTCCCTACAGCCGACGGGGGCTGTTCGTAG