prot_E-siliculosus-1a_F_contig1087.596.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1087.596.1
Unique Nameprot_E-siliculosus-1a_F_contig1087.596.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length231
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1087.596.1 vs. uniprot
Match: D7FLC8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLC8_ECTSI)

HSP 1 Score: 355 bits (912), Expect = 5.120e-122
Identity = 191/208 (91.83%), Postives = 199/208 (95.67%), Query Frame = 0 
Query:    1 MDVAAKAKKSQALIDSIEELIVLEADVSLATECCQQQREPEVMVPLTEVAFMHASVAGESVMMGLGQDYFVERTPEQARAVLRRRMADLSEQARVLREGTLLAPKEPAKSVQGQRRQKKGDSDSKKTWANKGFLSSKGSGGPTKGRLPPKRQTVPPEEPKEAADGGSSRTPTEIKFDDSEGQEVRISTPSADFQATTGPT--RLCSYC 206
            MDVAAKAKKSQALIDSIEELI LEADVSLAT+CCQQQREPEVMVPLT+VAFMH SVAGES+MMGLGQDYFVERTPEQAR VL+RRMADLSEQARVLREGTLLAPKEPAKSVQGQRR+KKGDSD+KKTWA KGFLSSKGSGGPTKG LPPKRQTVPPEEPKEAADGGS RTPTEIKFDDSEGQEVRIS+PS DFQ+TTGPT  RLCSYC
Sbjct:    1 MDVAAKAKKSQALIDSIEELIALEADVSLATQCCQQQREPEVMVPLTDVAFMHGSVAGESIMMGLGQDYFVERTPEQAREVLQRRMADLSEQARVLREGTLLAPKEPAKSVQGQRRRKKGDSDTKKTWA-KGFLSSKGSGGPTKGHLPPKRQTVPPEEPKEAADGGSLRTPTEIKFDDSEGQEVRISSPSEDFQSTTGPTINRLCSYC 207
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1087.596.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FLC8_ECTSI5.120e-12291.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004127Prefoldin alpha-likePFAMPF02996Prefoldincoord: 8..98
e-value: 1.0E-12
score: 48.0
IPR009053PrefoldinGENE3D1.10.287.370coord: 5..126
e-value: 5.9E-13
score: 50.7
NoneNo IPR availableSUPERFAMILY46579Prefoldincoord: 27..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1087contigE-siliculosus-1a_F_contig1087:34898..37389 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1087.596.1mRNA_E-siliculosus-1a_F_contig1087.596.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1087 34898..37438 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1087.596.1 ID=prot_E-siliculosus-1a_F_contig1087.596.1|Name=mRNA_E-siliculosus-1a_F_contig1087.596.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=231bp
MDVAAKAKKSQALIDSIEELIVLEADVSLATECCQQQREPEVMVPLTEVA
FMHASVAGESVMMGLGQDYFVERTPEQARAVLRRRMADLSEQARVLREGT
LLAPKEPAKSVQGQRRQKKGDSDSKKTWANKGFLSSKGSGGPTKGRLPPK
RQTVPPEEPKEAADGGSSRTPTEIKFDDSEGQEVRISTPSADFQATTGPT
RLCSYCRLQVALHVESRRGYLPALWLEPLM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009053Prefoldin
IPR004127Prefoldin_subunit_alpha