mRNA_E-siliculosus-1a_F_contig1087.593.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1087.593.1
Unique NamemRNA_E-siliculosus-1a_F_contig1087.593.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1087.593.1 vs. uniprot
Match: A0A7Y2B1D9_9BACT (SDR family oxidoreductase n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7Y2B1D9_9BACT)

HSP 1 Score: 540 bits (1391), Expect = 2.270e-184
Identity = 266/315 (84.44%), Postives = 291/315 (92.38%), Query Frame = 1
Query:  121 MAETQFGPEGWTPERLGNLAGKTYLITGANAGVGFQASRILLSKGAKVVMLNRSVEKSAAAVKDLNEEFGAGADVSFVRMDLAELASVREAAAEVLKTVPQIDTLICNAAIAQVPSQKLTKDGFESQLGTNHYGHFVLCGMLFDRIEESKGRIVVVASLGYKMGIRTIQFDDMNWDKNYSANPVYSQSKLAQMMFAYELQDRVKQSSKNIEVYVCHPESSATSLITTSGGLVTRIAFYLMSLSPMVQSADKGAYPEVMCATENGLEQRALYGPTGRMEWVGPVGKGTLEAFAYDKAVMAKLWSRSEKETGFSWSL 1065
            MA+T+FGP+GWTPERLG+LAGKTYLITGANAG GFQASRILLSKGAKVVMLNRS  KS AA+KDL EEFGA ADV FVRMDLAELASVREAA EVL+TVP+ID LICNAAIAQVP++K TKDGFESQLGTNHYGHFVLCGMLFDRIEESKGR+VVVASLGYKMG+RTI+FDDMNWD+NY ANP YSQSKLAQMMFAYELQDRV+ ++KN+EVYVCHP SSATSLI TSG L +RI F LMSLSP+VQSA+KGAYPEVMCATE+ L+QRALYGPTGRMEWVGPVG+GTLE +A+DKAVM KLW RSEKET FSWSL
Sbjct:    1 MADTRFGPKGWTPERLGSLAGKTYLITGANAGAGFQASRILLSKGAKVVMLNRSAGKSTAALKDLKEEFGADADVGFVRMDLAELASVREAAVEVLRTVPRIDALICNAAIAQVPTRKFTKDGFESQLGTNHYGHFVLCGMLFDRIEESKGRVVVVASLGYKMGLRTIRFDDMNWDRNYRANPAYSQSKLAQMMFAYELQDRVRAANKNVEVYVCHPGSSATSLIKTSGSLASRIVFSLMSLSPLVQSAEKGAYPEVMCATEDSLDQRALYGPTGRMEWVGPVGRGTLEPYAHDKAVMVKLWDRSEKETDFSWSL 315          
BLAST of mRNA_E-siliculosus-1a_F_contig1087.593.1 vs. uniprot
Match: A0A2R8B6N8_9RHOB (Ribitol 2-dehydrogenase n=1 Tax=Defluviimonas aquaemixtae TaxID=1542388 RepID=A0A2R8B6N8_9RHOB)

HSP 1 Score: 538 bits (1387), Expect = 9.100e-184
Identity = 266/315 (84.44%), Postives = 290/315 (92.06%), Query Frame = 1
Query:  121 MAETQFGPEGWTPERLGNLAGKTYLITGANAGVGFQASRILLSKGAKVVMLNRSVEKSAAAVKDLNEEFGAGADVSFVRMDLAELASVREAAAEVLKTVPQIDTLICNAAIAQVPSQKLTKDGFESQLGTNHYGHFVLCGMLFDRIEESKGRIVVVASLGYKMGIRTIQFDDMNWDKNYSANPVYSQSKLAQMMFAYELQDRVKQSSKNIEVYVCHPESSATSLITTSGGLVTRIAFYLMSLSPMVQSADKGAYPEVMCATENGLEQRALYGPTGRMEWVGPVGKGTLEAFAYDKAVMAKLWSRSEKETGFSWSL 1065
            M ++QFGP+GWTPERLG+LAGKTY+ITGANAG GF+ASRILLSKGAKVVMLNRS EKS AAV+ L +EFG  ADVSFVRMDLAELASVR+AAAEVLK VP+ID LICNAAIAQVP QK TKDGFESQLGTNHYGHFVLCGMLFDRI+ES+GRIVVVASLGYKMG+RTIQFDDMNWDKNY ANP YSQSKLAQMMFAYELQDRVK ++KN+EVYVCHP SSATSLI TSG L +R  FY+M+LSP+VQSA+KGAYPEVMCATE GL+Q+ALYGPTGRMEWVGPVGKGTLE FA DKAVM KLWSRSEKETGFSWS+
Sbjct:    1 MKDSQFGPKGWTPERLGSLAGKTYVITGANAGAGFEASRILLSKGAKVVMLNRSPEKSTAAVETLKKEFGPDADVSFVRMDLAELASVRDAAAEVLKMVPRIDALICNAAIAQVPMQKSTKDGFESQLGTNHYGHFVLCGMLFDRIDESRGRIVVVASLGYKMGLRTIQFDDMNWDKNYRANPAYSQSKLAQMMFAYELQDRVKAANKNVEVYVCHPGSSATSLIKTSGSLTSRFVFYIMTLSPLVQSAEKGAYPEVMCATEGGLDQKALYGPTGRMEWVGPVGKGTLEPFALDKAVMEKLWSRSEKETGFSWSV 315          
BLAST of mRNA_E-siliculosus-1a_F_contig1087.593.1 vs. uniprot
Match: A0A0P1F4M8_THAGE (Fatty acyl-CoA reductase n=1 Tax=Thalassobius gelatinovorus TaxID=53501 RepID=A0A0P1F4M8_THAGE)

HSP 1 Score: 533 bits (1373), Expect = 1.170e-181
Identity = 264/314 (84.08%), Postives = 285/314 (90.76%), Query Frame = 1
Query:  121 MAETQFGPEGWTPERLGNLAGKTYLITGANAGVGFQASRILLSKGAKVVMLNRSVEKSAAAVKDLNEEFGAGADVSFVRMDLAELASVREAAAEVLKTVPQIDTLICNAAIAQVPSQKLTKDGFESQLGTNHYGHFVLCGMLFDRIEESKGRIVVVASLGYKMGIRTIQFDDMNWDKNYSANPVYSQSKLAQMMFAYELQDRVKQSSKNIEVYVCHPESSATSLITTSGGLVTRIAFYLMSLSPMVQSADKGAYPEVMCATENGLEQRALYGPTGRMEWVGPVGKGTLEAFAYDKAVMAKLWSRSEKETGFSWS 1062
            M +TQFGP+GWTPER+G+LAGKTY+ITGANAG GFQA+RILLSKGAKVVMLNRS EKS AA++ L +EFGAGADVSFVRMDLAELA+VR AA EVLKTV QID LICNAAIAQVP+Q  TKDGFESQLGTNHYGHFVLCG+LFD+IE SKGRIVVVASLGYKMG+RTIQFDDMNWDKNYSANP YSQSKLAQMMFAYELQD+VK +SK +EVYVCHP SSATSLI+TSG L +RI F LMSLSPMVQSA KGAYPEVMC TE+GLEQRALYGPTGRMEWVGPVGKGTLE +AYDK VM KLW RSE ETGF WS
Sbjct:    1 MKDTQFGPKGWTPERIGSLAGKTYVITGANAGAGFQAARILLSKGAKVVMLNRSAEKSTAAIETLKQEFGAGADVSFVRMDLAELATVRAAATEVLKTVAQIDALICNAAIAQVPTQTFTKDGFESQLGTNHYGHFVLCGILFDKIERSKGRIVVVASLGYKMGLRTIQFDDMNWDKNYSANPAYSQSKLAQMMFAYELQDKVKTASKTVEVYVCHPGSSATSLISTSGSLTSRIVFGLMSLSPMVQSAKKGAYPEVMCVTEDGLEQRALYGPTGRMEWVGPVGKGTLEPYAYDKPVMEKLWDRSETETGFRWS 314          
BLAST of mRNA_E-siliculosus-1a_F_contig1087.593.1 vs. uniprot
Match: A0A0M7A383_9HYPH (NADP-dependent 3-hydroxy acid dehydrogenase YdfG n=1 Tax=Roseibium album TaxID=311410 RepID=A0A0M7A383_9HYPH)

HSP 1 Score: 531 bits (1367), Expect = 9.420e-181
Identity = 264/315 (83.81%), Postives = 286/315 (90.79%), Query Frame = 1
Query:  121 MAETQFGPEGWTPERLGNLAGKTYLITGANAGVGFQASRILLSKGAKVVMLNRSVEKSAAAVKDLNEEFGAGADVSFVRMDLAELASVREAAAEVLKTVPQIDTLICNAAIAQVPSQKLTKDGFESQLGTNHYGHFVLCGMLFDRIEESKGRIVVVASLGYKMGIRTIQFDDMNWDKNYSANPVYSQSKLAQMMFAYELQDRVKQSSKNIEVYVCHPESSATSLITTSGGLVTRIAFYLMSLSPMVQSADKGAYPEVMCATENGLEQRALYGPTGRMEWVGPVGKGTLEAFAYDKAVMAKLWSRSEKETGFSWSL 1065
            MA+TQFGP+GWTP RLG+LAGKTYLITGANAG GFQASRILLSKGAKVVMLNRS  KS  A+ +L +EFGA ADVSFVRMDLAELASVREAAA+VL+TVPQ+D LICNAAIAQVP QKLTKDGFESQLGTNHYGHF+LCGMLF RIE+SKGRIVVVASLGYKMG+RTIQFDDMNWDKNY AN  YSQSKLAQMMFA+ELQDRVK + KN+EVYVCHP SSATSLI TSG L +R  F LMSLSP+VQSA+KGAYPEVMCATE+GLEQRALYGPTGRMEWVGPVGKGTLE +A DK+VMA+LW RSE ETGFSW L
Sbjct:    1 MADTQFGPDGWTPGRLGSLAGKTYLITGANAGAGFQASRILLSKGAKVVMLNRSTGKSIDAIDELKKEFGAAADVSFVRMDLAELASVREAAAQVLRTVPQVDALICNAAIAQVPKQKLTKDGFESQLGTNHYGHFLLCGMLFSRIEDSKGRIVVVASLGYKMGVRTIQFDDMNWDKNYRANSAYSQSKLAQMMFAFELQDRVKAADKNVEVYVCHPGSSATSLIKTSGSLASRTLFGLMSLSPLVQSAEKGAYPEVMCATEDGLEQRALYGPTGRMEWVGPVGKGTLEPYACDKSVMARLWLRSENETGFSWCL 315          
BLAST of mRNA_E-siliculosus-1a_F_contig1087.593.1 vs. uniprot
Match: UPI0019EDC366 (SDR family oxidoreductase n=1 Tax=filamentous cyanobacterium LEGE 11480 TaxID=2777977 RepID=UPI0019EDC366)

HSP 1 Score: 525 bits (1352), Expect = 1.850e-178
Identity = 257/312 (82.37%), Postives = 286/312 (91.67%), Query Frame = 1
Query:  127 ETQFGPEGWTPERLGNLAGKTYLITGANAGVGFQASRILLSKGAKVVMLNRSVEKSAAAVKDLNEEFGAGADVSFVRMDLAELASVREAAAEVLKTVPQIDTLICNAAIAQVPSQKLTKDGFESQLGTNHYGHFVLCGMLFDRIEESKGRIVVVASLGYKMGIRTIQFDDMNWDKNYSANPVYSQSKLAQMMFAYELQDRVKQSSKNIEVYVCHPESSATSLITTSGGLVTRIAFYLMSLSPMVQSADKGAYPEVMCATENGLEQRALYGPTGRMEWVGPVGKGTLEAFAYDKAVMAKLWSRSEKETGFSWS 1062
            +TQFGP+GWTPE+LG+LAGKT++ITGANAG GF+ASRILLSKGAKVVMLNR+ +KS  A+  L EEFG+ ADV+FVRMDLA L SVREAAAEV++ VPQID LICNAAIAQVP++KLT+DGFESQLGTNHYGHFVLCGMLFDRIE S+GRIVVVASLGYKMG+RTIQFDDMNWDKNYSANP YSQSKLAQMMFAYELQDR++   K +EVYVCHP SSATSLI TSGGL TRI F LMSLSPMVQSA+KGAYPEVMCAT+ GLEQRALYGPTGRMEWVGPVGKGTLE+FAY+K+VM KLW RSE+ETGFSW+
Sbjct:    5 DTQFGPKGWTPEQLGSLAGKTFVITGANAGAGFEASRILLSKGAKVVMLNRNADKSTVAIATLKEEFGSDADVTFVRMDLAVLDSVREAAAEVMEQVPQIDALICNAAIAQVPTRKLTQDGFESQLGTNHYGHFVLCGMLFDRIEASQGRIVVVASLGYKMGLRTIQFDDMNWDKNYSANPAYSQSKLAQMMFAYELQDRIRAEHKTVEVYVCHPGSSATSLIKTSGGLTTRIMFKLMSLSPMVQSAEKGAYPEVMCATQGGLEQRALYGPTGRMEWVGPVGKGTLESFAYEKSVMEKLWKRSEQETGFSWT 316          
BLAST of mRNA_E-siliculosus-1a_F_contig1087.593.1 vs. uniprot
Match: A0A520Y309_9ACTN (SDR family oxidoreductase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A520Y309_9ACTN)

HSP 1 Score: 523 bits (1348), Expect = 6.870e-178
Identity = 258/315 (81.90%), Postives = 282/315 (89.52%), Query Frame = 1
Query:  121 MAETQFGPEGWTPERLGNLAGKTYLITGANAGVGFQASRILLSKGAKVVMLNRSVEKSAAAVKDLNEEFGAGADVSFVRMDLAELASVREAAAEVLKTVPQIDTLICNAAIAQVPSQKLTKDGFESQLGTNHYGHFVLCGMLFDRIEESKGRIVVVASLGYKMGIRTIQFDDMNWDKNYSANPVYSQSKLAQMMFAYELQDRVKQSSKNIEVYVCHPESSATSLITTSGGLVTRIAFYLMSLSPMVQSADKGAYPEVMCATENGLEQRALYGPTGRMEWVGPVGKGTLEAFAYDKAVMAKLWSRSEKETGFSWSL 1065
            MA+  FGP GWT ERLG+L GKTY+ITGANAG GFQASR+LLSKGA+VVMLNRS EKS AAVKDL EEFG GADVSFV MDLA  ASVR+AAAEVLKTVPQID LICNAAIAQVP+QK+T DGFESQLGTNHYGHF LCGMLFDRIEESKGRIVVVASLGYKMG+RTIQFDDMNWDKNY+AN  YSQSKLAQMMFAYELQD+VK +++N++ YVCHP SS TSLI TSG + TRI F LMS+SP+ QSA+KG+YPEVMCATE+GLEQRALYGPTGR EWVGPVGKGTLE  AYDKAVM+KLW RSEKETGF WS+
Sbjct:    1 MADKTFGPNGWTLERLGSLVGKTYVITGANAGAGFQASRVLLSKGARVVMLNRSAEKSTAAVKDLKEEFGQGADVSFVPMDLAVQASVRDAAAEVLKTVPQIDALICNAAIAQVPTQKITVDGFESQLGTNHYGHFTLCGMLFDRIEESKGRIVVVASLGYKMGLRTIQFDDMNWDKNYNANRAYSQSKLAQMMFAYELQDKVKAANRNVQAYVCHPGSSRTSLIATSGSMTTRIIFRLMSMSPLTQSAEKGSYPEVMCATEDGLEQRALYGPTGRAEWVGPVGKGTLEPHAYDKAVMSKLWDRSEKETGFEWSI 315          
BLAST of mRNA_E-siliculosus-1a_F_contig1087.593.1 vs. uniprot
Match: UPI001FCFFCF2 (SDR family oxidoreductase n=1 Tax=Phaeobacter sp. J2-8 TaxID=2931394 RepID=UPI001FCFFCF2)

HSP 1 Score: 520 bits (1339), Expect = 1.560e-176
Identity = 255/315 (80.95%), Postives = 284/315 (90.16%), Query Frame = 1
Query:  121 MAETQFGPEGWTPERLGNLAGKTYLITGANAGVGFQASRILLSKGAKVVMLNRSVEKSAAAVKDLNEEFGAGADVSFVRMDLAELASVREAAAEVLKTVPQIDTLICNAAIAQVPSQKLTKDGFESQLGTNHYGHFVLCGMLFDRIEESKGRIVVVASLGYKMGIRTIQFDDMNWDKNYSANPVYSQSKLAQMMFAYELQDRVKQSSKNIEVYVCHPESSATSLITTSGGLVTRIAFYLMSLSPMVQSADKGAYPEVMCATENGLEQRALYGPTGRMEWVGPVGKGTLEAFAYDKAVMAKLWSRSEKETGFSWSL 1065
            M +TQFGP+GWTP+RLG+LAGKTYLITGANAG GFQA+RILL+KGA+VVMLNRS EKS+AAV DL +EFGA ADV F+RMDLAELASVR AAAEVL TVP+ID LICNAAIAQVP+QK TKDGFESQLGTNHYGHFVLCGMLFDRI+ES GRIVVVASLGYKMG+RTIQFDDMNWDK Y ANP YSQSKLAQMMFAYELQDR+  + K + V+VCHP SSATSLI TSG L +R+ F LMSLSPMVQSA+KGAYPEVMCATE+GL+ +ALYGPTGRMEWVGPVG+GTLE+FA+DKAV  KLW RSEKETGF+W +
Sbjct:    1 MTDTQFGPKGWTPDRLGSLAGKTYLITGANAGAGFQAARILLAKGAQVVMLNRSAEKSSAAVDDLKQEFGAKADVRFIRMDLAELASVRAAAAEVLATVPRIDALICNAAIAQVPTQKFTKDGFESQLGTNHYGHFVLCGMLFDRIDESAGRIVVVASLGYKMGLRTIQFDDMNWDKAYRANPAYSQSKLAQMMFAYELQDRIAAAGKRVRVFVCHPGSSATSLIRTSGSLTSRLVFGLMSLSPMVQSAEKGAYPEVMCATEDGLKPKALYGPTGRMEWVGPVGQGTLESFAHDKAVTVKLWDRSEKETGFTWQI 315          
BLAST of mRNA_E-siliculosus-1a_F_contig1087.593.1 vs. uniprot
Match: A0A4R1ETC5_9GAMM (NAD(P)-dependent dehydrogenase (Short-subunit alcohol dehydrogenase family) n=1 Tax=Cocleimonas flava TaxID=634765 RepID=A0A4R1ETC5_9GAMM)

HSP 1 Score: 518 bits (1334), Expect = 9.160e-176
Identity = 252/310 (81.29%), Postives = 286/310 (92.26%), Query Frame = 1
Query:  136 FGPEGWTPERLGNLAGKTYLITGANAGVGFQASRILLSKGAKVVMLNRSVEKSAAAVKDLNEEFGAGADVSFVRMDLAELASVREAAAEVLKTVPQIDTLICNAAIAQVPSQKLTKDGFESQLGTNHYGHFVLCGMLFDRIEESKGRIVVVASLGYKMGIRTIQFDDMNWDKNYSANPVYSQSKLAQMMFAYELQDRVKQSSKNIEVYVCHPESSATSLITTSGGLVTRIAFYLMSLSPMVQSADKGAYPEVMCATENGLEQRALYGPTGRMEWVGPVGKGTLEAFAYDKAVMAKLWSRSEKETGFSWSL 1065
            FG +GWTPE L +LAGKTY+ITGAN+GVGF+ASRILLSKGAKVVMLNR+ +KS AA++ L +EFGAG DV+F+RMDL+ LASVREAAAEVL TVPQID LICNAAIAQVP+QKLT DGFESQLGTNHYGHFVLCGMLF RIEESKGRIVVVASLGYK+G+RTIQFDDMNWDK YSANP YSQSKLAQMMFAYELQD+VK ++KN++VYVCHP SSATSLI+TSGG++TRIA++LM+ SPMVQ+A+KGAYPEVMCAT+ GLEQRALYGPTGRME +GPVGKGTLE +AYDK VM KLWSRSEKETGF W++
Sbjct:    7 FGEKGWTPEELDSLAGKTYIITGANSGVGFEASRILLSKGAKVVMLNRNADKSTAAIELLKQEFGAGTDVTFIRMDLSVLASVREAAAEVLNTVPQIDALICNAAIAQVPTQKLTVDGFESQLGTNHYGHFVLCGMLFGRIEESKGRIVVVASLGYKLGLRTIQFDDMNWDKKYSANPAYSQSKLAQMMFAYELQDKVKATNKNVQVYVCHPGSSATSLISTSGGIITRIAWWLMTKSPMVQTAEKGAYPEVMCATQKGLEQRALYGPTGRMEMIGPVGKGTLEPYAYDKTVMEKLWSRSEKETGFEWTV 316          
BLAST of mRNA_E-siliculosus-1a_F_contig1087.593.1 vs. uniprot
Match: A0A520XJ31_9ACTN (SDR family oxidoreductase n=2 Tax=Bacteria TaxID=2 RepID=A0A520XJ31_9ACTN)

HSP 1 Score: 517 bits (1331), Expect = 2.500e-175
Identity = 256/315 (81.27%), Postives = 285/315 (90.48%), Query Frame = 1
Query:  121 MAETQFGPEGWTPERLGNLAGKTYLITGANAGVGFQASRILLSKGAKVVMLNRSVEKSAAAVKDLNEEFGAGADVSFVRMDLAELASVREAAAEVLKTVPQIDTLICNAAIAQVPSQKLTKDGFESQLGTNHYGHFVLCGMLFDRIEESKGRIVVVASLGYKMGIRTIQFDDMNWDKNYSANPVYSQSKLAQMMFAYELQDRVKQSSKNIEVYVCHPESSATSLITTSGGLVTRIAFYLMSLSPMVQSADKGAYPEVMCATENGLEQRALYGPTGRMEWVGPVGKGTLEAFAYDKAVMAKLWSRSEKETGFSWSL 1065
            MA+T+FGP+GWTP+RLG+LAGKTYLITGAN+G GF+ASRILL KGAKVVMLNRS EKSAAA++ L  EFG  ADVSFVRMDLAELASVR+AA +VLKTVP+ID LICNAAIAQVP+QK TKDGFESQLGTNHYGHFVLCGMLF+RIE+S GRIVVVASLGYKMGI+TIQFDD+NWDKNYSANPVYSQSKLAQMMFAYELQDRVK + K +EVYVCHP SSATSLI+TSGGL TRIA++LM+ SPMVQ+A+KGAYPEVMCATE GLEQRA YGPTGRME+VGPVG GTLE +A+DK VM+KLW  SE  TGF W  
Sbjct:    1 MADTEFGPKGWTPDRLGSLAGKTYLITGANSGTGFEASRILLRKGAKVVMLNRSPEKSAAAIETLKAEFGPDADVSFVRMDLAELASVRDAAKQVLKTVPRIDALICNAAIAQVPTQKFTKDGFESQLGTNHYGHFVLCGMLFERIEKSAGRIVVVASLGYKMGIKTIQFDDINWDKNYSANPVYSQSKLAQMMFAYELQDRVKAADKTVEVYVCHPGSSATSLISTSGGLGTRIAWWLMTKSPMVQTAEKGAYPEVMCATEEGLEQRAFYGPTGRMEFVGPVGTGTLEPYAHDKTVMSKLWDVSETATGFKWGF 315          
BLAST of mRNA_E-siliculosus-1a_F_contig1087.593.1 vs. uniprot
Match: A0A7Y2CDH5_9PROT (SDR family oxidoreductase n=1 Tax=Marinicaulis sp. TaxID=2174442 RepID=A0A7Y2CDH5_9PROT)

HSP 1 Score: 516 bits (1328), Expect = 7.080e-175
Identity = 254/315 (80.63%), Postives = 283/315 (89.84%), Query Frame = 1
Query:  121 MAETQFGPEGWTPERLGNLAGKTYLITGANAGVGFQASRILLSKGAKVVMLNRSVEKSAAAVKDLNEEFGAGADVSFVRMDLAELASVREAAAEVLKTVPQIDTLICNAAIAQVPSQKLTKDGFESQLGTNHYGHFVLCGMLFDRIEESKGRIVVVASLGYKMGIRTIQFDDMNWDKNYSANPVYSQSKLAQMMFAYELQDRVKQSSKNIEVYVCHPESSATSLITTSGGLVTRIAFYLMSLSPMVQSADKGAYPEVMCATENGLEQRALYGPTGRMEWVGPVGKGTLEAFAYDKAVMAKLWSRSEKETGFSWSL 1065
            M  T+FGP+GWTPERLG+LAGKTY+ITGANAG GFQASRILLSKGAKVVMLNR+ EKS AA+ DL EEFG GADVSFVRMDL+ELASVR+AAAE L+    ID LICNAAIAQVP+QK T DGFESQLGTNHYGHFVLCG+LF+RIE+SKGRIVVVASLGYK+GIRTIQFDDMNWDKNY AN VYSQSKLAQMMFAYELQDR+K ++KN  VYVCHP +SATSLI+TSGG + R A++LM+ +PMVQSA+KGA+PEVMCATENGLE+RALYGPTGR+E VGPVGKGTLE  AYDK VMAKLW RSEKETGFSW +
Sbjct:    1 MKNTKFGPQGWTPERLGSLAGKTYMITGANAGAGFQASRILLSKGAKVVMLNRNAEKSVAAINDLKEEFGVGADVSFVRMDLSELASVRKAAAEALEMASNIDALICNAAIAQVPTQKFTVDGFESQLGTNHYGHFVLCGLLFNRIEDSKGRIVVVASLGYKLGIRTIQFDDMNWDKNYRANAVYSQSKLAQMMFAYELQDRIKAANKNARVYVCHPGASATSLISTSGGPLARFAWWLMTKTPMVQSAEKGAHPEVMCATENGLEERALYGPTGRLEAVGPVGKGTLEPHAYDKTVMAKLWDRSEKETGFSWDI 315          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1087.593.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7Y2B1D9_9BACT2.270e-18484.44SDR family oxidoreductase n=1 Tax=Gemmatimonadetes... [more]
A0A2R8B6N8_9RHOB9.100e-18484.44Ribitol 2-dehydrogenase n=1 Tax=Defluviimonas aqua... [more]
A0A0P1F4M8_THAGE1.170e-18184.08Fatty acyl-CoA reductase n=1 Tax=Thalassobius gela... [more]
A0A0M7A383_9HYPH9.420e-18183.81NADP-dependent 3-hydroxy acid dehydrogenase YdfG n... [more]
UPI0019EDC3661.850e-17882.37SDR family oxidoreductase n=1 Tax=filamentous cyan... [more]
A0A520Y309_9ACTN6.870e-17881.90SDR family oxidoreductase n=1 Tax=Acidimicrobiia b... [more]
UPI001FCFFCF21.560e-17680.95SDR family oxidoreductase n=1 Tax=Phaeobacter sp. ... [more]
A0A4R1ETC5_9GAMM9.160e-17681.29NAD(P)-dependent dehydrogenase (Short-subunit alco... [more]
A0A520XJ31_9ACTN2.500e-17581.27SDR family oxidoreductase n=2 Tax=Bacteria TaxID=2... [more]
A0A7Y2CDH5_9PROT7.080e-17580.63SDR family oxidoreductase n=1 Tax=Marinicaulis sp.... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1087contigE-siliculosus-1a_F_contig1087:1394..10058 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size948
Model size2554
Exons2
Ec32 orthologEc-12_007650.1
Ec32 ortholog descriptionGlucose/ribitol dehydrogenase
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelAlphaproteobacteria
COG Functional cat.IQ
EggNOG OGs1P9R4@1224,2TTJ5@28211,COG1028@1,COG1028@2
EggNOG free text desc.Short-chain dehydrogenase reductase sdr
Seed eggNOG ortholog1337093.MBE-LCI_0621
Seed ortholog evalue8.5e-144
Seed ortholog score516.5
Taxonomic scopeBacteria
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1087.593.1prot_E-siliculosus-1a_F_contig1087.593.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1087 7625..8572 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927586.850472-UTR-E-siliculosus-1a_F_contig1087:1393..14971622927586.850472-UTR-E-siliculosus-1a_F_contig1087:1393..1497Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1087 1394..1497 +
1696318599.0580344-UTR-E-siliculosus-1a_F_contig1087:1393..14971696318599.0580344-UTR-E-siliculosus-1a_F_contig1087:1393..1497Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1087 1394..1497 +
1622927586.8949394-UTR-E-siliculosus-1a_F_contig1087:7608..76241622927586.8949394-UTR-E-siliculosus-1a_F_contig1087:7608..7624Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1087 7609..7624 +
1696318599.069341-UTR-E-siliculosus-1a_F_contig1087:7608..76241696318599.069341-UTR-E-siliculosus-1a_F_contig1087:7608..7624Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1087 7609..7624 +
1622927586.9249794-UTR-E-siliculosus-1a_F_contig1087:8572..100581622927586.9249794-UTR-E-siliculosus-1a_F_contig1087:8572..10058Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1087 8573..10058 +
1696318599.08666-UTR-E-siliculosus-1a_F_contig1087:8572..100581696318599.08666-UTR-E-siliculosus-1a_F_contig1087:8572..10058Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1087 8573..10058 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927586.9089196-CDS-E-siliculosus-1a_F_contig1087:7624..85721622927586.9089196-CDS-E-siliculosus-1a_F_contig1087:7624..8572Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1087 7625..8572 +
1696318599.078311-CDS-E-siliculosus-1a_F_contig1087:7624..85721696318599.078311-CDS-E-siliculosus-1a_F_contig1087:7624..8572Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1087 7625..8572 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1087.593.1

>prot_E-siliculosus-1a_F_contig1087.593.1 ID=prot_E-siliculosus-1a_F_contig1087.593.1|Name=mRNA_E-siliculosus-1a_F_contig1087.593.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=316bp
MAETQFGPEGWTPERLGNLAGKTYLITGANAGVGFQASRILLSKGAKVVM
LNRSVEKSAAAVKDLNEEFGAGADVSFVRMDLAELASVREAAAEVLKTVP
QIDTLICNAAIAQVPSQKLTKDGFESQLGTNHYGHFVLCGMLFDRIEESK
GRIVVVASLGYKMGIRTIQFDDMNWDKNYSANPVYSQSKLAQMMFAYELQ
DRVKQSSKNIEVYVCHPESSATSLITTSGGLVTRIAFYLMSLSPMVQSAD
KGAYPEVMCATENGLEQRALYGPTGRMEWVGPVGKGTLEAFAYDKAVMAK
LWSRSEKETGFSWSL*
back to top

mRNA from alignment at E-siliculosus-1a_F_contig1087:1394..10058+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1087.593.1 ID=mRNA_E-siliculosus-1a_F_contig1087.593.1|Name=mRNA_E-siliculosus-1a_F_contig1087.593.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=8665bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1087:1394..10058+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CACCTTTGTCGGTGTTGACATGTCGGTCCTGACGTGTTGACTCTCTGCTG CAACCAAAGCGGATTGAATACAACCAAGAGTGCTACCGGAATCTCGGTCA CTAGGTAAGCGCGTTTGTGTAGTGGTGTGCTGCCCACAGCAGCAGTCGTT GACAACGCAAACCAGTTGCCAGCTGCTGCATCTCTGCTCGCCGGCGGAGA CAGAACCTCTCTACGTTGCACATAGGCACATCGGACGCACTGCGGTGGTA CGCGTTGTGTGTGTGTCGGTTTCACATCAAGCTCTTGTGATTCGGCACCC TCTGGCGGCGCCGATTTCCAAACCAGTGCAGCAGAGGACACTACAGAACT GCGCGCAGATCTGCGGAAATACCCTTGGTGATTGTCCGCGTCAGTTGCAA GTCCGCCGCTGACTTGATTTCGCCTCCAGCGTCAAACCGCATCGAACGAA TACATAAAAAGAAAAAGCCGATTGGTGAGACGTGGATCAGTTGCTCACCT TGTGGCGCCTACATGTCCGCAAGGTATCCCGGTGCTTCTTTGGCCACAGA ACAAGGATCACCGTGATTGAGTAAATCCACTTTGGAGCAACTGCACTGCT GTCACTGCAGTCGCTGACAGGTACAAAGCTTGCATGTGATGCGAGGCGAC GCGACGTACTGCTATGCATAGGCAGTAACTAGTAGGCCCTATATGTGGTA GGTGTCCCGATATAGTGCCGGTATGTGTCCAGGCGATTTGACCGGCACTT TACCGGGCACCGGCACTATTCAGGACTGTTCGACTTCAGAGTGCAGCTCT TGCGCTTTGCGGGGCTGACAGAGTACCAAACGAACGGTACTGTATTTGGA TCAATCGTGAGGTGGGCGACGTGGGCGGGCTTCATTAAGTTTCGTGAGGC TCTTGGACTGTCGAAAACACGGCATTGGTCACATTACAATTAATTTGATT GACCAGATAAATTTGTTGCACAGCAGTTGTTCTCTTCCCACCTCAGCGCA AGCACGCTCTAGTGAAACGTTGCTGCTGCCTTTCAACCGTAGATCGTGCT GCCCGATAAAAGTTCACCTCGCTATCAATACATTATGTGTTGTATTGCAA GAAGGCCGTAGCACTATTCGGGCAACCCCAAAGGCACCCGTCGACAGCGA AAGAAGACGCTCATCCACGCACCCGATGTATATTTGGAGGTAAAACATGG ATGGATGTAGTGCTCCTTACATGAGCACACAAAAACAGATGCAACCTAAG AAAGGGGTGAAGAAGATAACGAACTCCCCTGTTCCTTCGATAAAAAGCTA GCGAGAAGACCAAGCGTTCAGAAGCAAGAAAAACGACTGGCCAACCAAAA GACGTCAGTCTCAGTGCGGTCAATAACAGAAAATATTTGTTTCTCAAGGC CGTGAGAGGGTGTCATGGAGGAGGCTGAGCTACTCCCTGGATAAAAGACA GAAATGGTAGCAACAGAGAGAGAAGGCCTAGGTGACTGCCAAGGCTTACT ACTTTGAACACGCGTTCGTTTCGGAGTGTTTTCATAGAAATATTTTATTT ACCACCACTACTACATACACTCTCACGAATATTTTTCCACTATTGTTTTC ATCTCTAGATTCTGCGCCCCTGCGGCGTTTGTTGTGAGGAAGGTCATCTC GCTCAAAACTCTTGTTGTTTCCCTCAACGCCATATTTTCCTCCTGCATCA TCACTTCTATCCTATAATTTCCATATCCTTCGTCACTACCACCATCTTCC TTTTGGCTCGCCTCACTACTGAAATCCCAGCCTATTGGTGGAACCTGGTC GATCGGTATACCGTGACATTTGAAGACGTCACGCGTACCGAGAGAAACCG AGCTATACTGGTAGCTCGGAGGGAAAGCGTCTCCGAATCCTGTTGGCGTG GAAGGCTTGAGGCGAAAAAAGGCTGTTTGTGGGGTCTGAACCGGCACTAT TGACGGGTTCGATAGTGCCTGAACCGGCACTATAGCGGGCATCCCTGAAT AGTGCCAAACCGGCACCCTGTGTCTGCGTCGAGGAACTTTACCGGCACTA TACCGGATGTTGGCACTATTCAACCGGCACTATATCGGGACACCTACTGT ATGTACGCGTGAAGTCTGGGAGACCCGTGAAGAACTCACTTGTCAAAGGG CCCAGGATCCTCTACTCAAGCAGGGGCTACTAGATCCTGTCCCCTGTTTT ATCCTTCCGCGGGGAGTTACATCTCTCCGCGCGTTCTAGAAGGAACCATT CTCTTTTATGTTCCGTCTACGCATCTGAATCCTAGTATCACATACGCTAA GCTGTCCTGTGACGGTTACAGACTTGGCAACGCCTTCACAATACCGTATC AAATCCATACAGTAGAGTAGAGGAGTAGAGTCGTTCTTGTAGTAGAACTG CTCAAGAACTACGTCATTAGTTCCGATGCATAAGGCCCAATTTTCTCTCT CAACGTCGTTTCGAAACTACCCGCCTCCTCTAGAGACAATGCTACCCACA AAAACTTGTACCTCATAATTCGTACTTAATGTAGTTGTCGCATCCCAGCT GGCCCGCCTCAGCAGCCACAGGTTTTCCTCCTACACAAGTCGAATTTTCT GTTGTATTCTTGTCCCTTCCTAGATTCAATCTAAGTGGATTGGGTTGGGT GAGGCCTCCTGCACCGACAGGAGGGCCTCGCCGTGAAGTAACTCTTCGGG CTGGGCATACAGATCGAACTATGCCCAGACCCGAAGCGTTTGAATGATCA GCAAGTTCATGAACAGAATTAGTATTCGTAGGGCGGGTGGGATGGTCTCA TATATTTCTTCTTTCTCCTCTGCTCCGCCGTATTTCGGGAGAGAGAAAGG GAACTGAACAAGGTAGAGTCATTTTCCAACATGCTTCATGGGATATCTCT TCCCGATCCGAGACATAAACATATTGGTACATAGTTCAAATGTCATGGAC TACGCCCAATAGGTTGGGATTTCAGTAGTGCGGGTGAAAAGGATGGTGAT GGTGTTGAGGATATTTCATGTGGGAGTGACGAAGGAGGAGGGAAGGGAAA GGAAAGAGAAGAAAGGAGGAGGATGAAAACGATGATGGAGGAGGAAATGT GACGTGGAAGAGAGCGAGAGAATTCGGGCCAGATGACCTTCCTCCCAACA ACGCCGCAGGGCTAGAGAGGACCTGCCAAAAAGTAGTGGAAATATTAGCG ACGAGAGTGGCAGTGGTGATGCAGTGAGGAAGATGAAAGCACTCCGGAAG GAACGCGGGTTCAAAGTAGCAGCTTTGATCAACACGCGCAGTTCTCTTTT GTTGCTACCGTTTCTGCCTTAAGTTCGGAGAGTAGCGTAGCGTCCCCAAT GATGCCCCCTCACGGCCCACGGCCCCCAGATCATGGCCTATAGAAGCATG TTGTGTTTTCAACCGACGTCTTTTCATCGGTCAGCCGGTTAGCGCGGTCG ATGCTCATAATAAACTCATACACACAACACCGTTTAACCCTCAAGGACTT AAGTCTGATTTCGAAGACGGGAGGTGATTATACTCCCAGCAGCATACCAC GGGCACGGAGAAACTCCGACGGGTTTAGCCCTTTGGTGAACATGTCGGTT CTGAAGCGACGTCCAGATGTACGTTACGTCTACAATCCCATTGGCTGCCA GCGACCTTACGTGGTGGACCTTTACATCAATGTGTTTGGTTTTGGGAGTA ATACGAAAGCTGGGAGTCAATTTTAGAGCGCCTCAGTTGTCCTCCCACAC TGCGGCCTCTTCCTGCGTCAATTTATGGTGTTCAGCAAGTGGCGAAAATA CTGGATAGCGTTGCACCCCTTGGGCAAAGCCACGAACTTTGCTTCGAACC AAGATACCGCCACCACCGTCTGCTTGGACGACGTCCAATCCACCGGCCCA CCTGCCAAGTTCAGCACGACTCCCGTGGTAGAGTAGCCCATGTATGTGCC GTCTGCGAAATCCGTGGCAAAGCTATGTGGTGCCCTCCGTTGACAATATC TCGTCGTCCAAGACGGACATCGGTCCAGCCTCAGACGGGGATGTCGTGGG ACGCGCGTCAGCCTTGCCGAACTTGTCTAACACGGCGTTGGCAAACGCTT CCTGTTCCAAAAGAATCGTCCCTGCGGCCTTGTCTCGCTTGATTTCCATA CCGATCAGGAATCGAGTTCCTCCCATGTCCACTGCTTTGAAACGCTCATT CAGCTGATCGACTTGCTCAGCACTTTGTTGTCGCTCTCCCCGGTCAGAAG AATATCATCCACATGAACGAGAAGCAGTGTCTCCGTCGCCCTCAACGAAT TCGATCTCTAAGAGAAAACCGTCCAGACTGTCCCATCAACCCATCAACCC TTCGAGGAAAGGCACAAACCGTAAAGCCGCGCCCTCGGTTTCCAGACTGC CTTTGGTGCTTGTTAATTGGATGAGAATGCTTCCGGGGGAATGAAGGACA CAGCTTTCGCCCCCGGTCGCATCCTCGCGTGAAGAGACGCCATCCTGATG TCGGTTTGCGCAACTATCAAATGGGCAGATTGGATTGACGCTACGGGCAC AGTCTTGTCGGTCTCTCTCTCAGCTTCGTGGAAACCTTGCACTAGAATTC AGGGTTTCTGTCGAACAGCGATTTAGTTGTTGGTCCACTTGCATATATGT ATCATGACGGTACAATTTTTGTGTCGGGTGGAGGATCACTATTTACCCGA TCAACGGGCCTGTAACTGTCGGAAGGATCCGCAGCATATGCCGGAGGGAT ATCAATCGCTGGTCGACCACCGACGTTTTTGAGCGGGTCGATCCTCCGCC CGACACTCAAATTGTCCAGTCAAAACACATACCTGGTAGTAATTGGAAGT ACAACGAAGCCGGAATCGCCGCCGTTCTCTATGAAAGCTACGGTCTGGAG TTCGAGACAAAGAAAAAATATTTCTTCATGCCTAAGGAAACTGGCATTGC CTATAATCCTCTTGTACCGATGTGATCCCGGGCAAGACAGCTTCTGATCA CAGCGATGAAACCCTTGGGGGTGAACTCCGAATTCGTGACTCAAAACCTA GACGGACTCGGGTACAATACTTTATTGAAAAGCACGATGCTGAAAAGTAT TCCAGTGGTTATCGTGCTTAATAGTCGGCGCTGACTGGTAGCCAAGTGGT CATCGTGCAGCATCATTTTAGGGAGTTTCTATCGTCGCGTTAGGTTTGCT AAAGCAGAAGCGGTTCGCTACCGAGGCCGTAGATGTGAGAGAGGGTATGA CAACCGCCCCGATGCTATCAGACATATCATACTTGTGCGTGTTATGGCAC CGGGGTGCGCTCGTGTTCCATCATCCTTCTTGGTTTTTTATCGCACCCCG GTGCCATAAAACCGATTGGTGCCATCACAGCGATACCAGTATACCAGTGC GGAAATGCAATTAAAAATAAATCATTTCGTTCGAGGTTTCCAACGCATCC CCGGTGCGATGACACCGAGCGATACTTAGGAAACGAACACAGGCGTTCCT GGTGCAAGTAGGGCAGCTTTGAGGTACAGGATCCGGTACCAAAACACATA CACAGCCTTGGGAAAGCAAACACGCACCGGTGTCGGCAAAATACGGCGAT TACGACCGCAAAATCCTGACAAAGGCGGCGAAATTACGCGCTATCCCGCC GCAAAACGAGTCGCGCAGCACACACACACAACCAAACCATAAACGCAAAC CGACGAAGCAGTACCGTTTACGAGCTCCTTCTTGTTCGGTTGGTTGGGGG TGCGGGATGTGTGCTGTATGCTTGGTTGAGTGAGTGAGTGCATTCGATGT ACGGATTCCCGTAGAGAAAGCTTGAATCATTTCTACGCGCGCACCTCGAC GGTACGATATATATACATGACAGGAATGGCGCCCCAATTGGTACCTACCG CGTGTCCAGGAGGGTACCAGTACCTTGCGGAAGCACGCAAATTCACGTCC TAAAGGTTTTATATCGTTGATATCGCACCGGGTGCGTTAACACCGATACC GGTGCGGAAATGCAATTGTTCATGCCGTTCGTGGTATGTTTGCGCACGGC GGTGCCGTAACACTGATGGGTTCGAAATCAACGACGGGTGCCATACCGCT CACAATTGCGGTATCTGTGCGATACCGTCTGCTCCTACTATTTTTTGTTT GCGGAGCAAAGAGTTACCTCTCATTTGAGACGAACACACATCGCGCGGCC CCTCAATCTCTACAGGAGCAGGCTCAAGACAATGGCAGAAACTCAATTCG GACCGGAGGGCTGGACACCCGAGCGCCTCGGCAACCTTGCGGGCAAGACC TACCTAATCACCGGGGCCAACGCCGGTGTAGGATTTCAGGCATCTCGAAT CCTTCTGTCGAAGGGCGCAAAGGTGGTGATGTTGAACCGCAGCGTCGAGA AATCGGCTGCCGCGGTCAAAGACCTGAACGAGGAATTTGGGGCGGGTGCT GATGTTAGCTTTGTCCGCATGGACCTGGCCGAGCTTGCGAGCGTCCGCGA GGCGGCGGCAGAGGTGTTGAAGACCGTTCCACAGATCGATACGCTTATCT GCAACGCCGCCATTGCGCAAGTACCGTCGCAGAAGCTCACCAAGGATGGC TTCGAAAGCCAACTTGGCACCAACCATTACGGCCATTTCGTCCTGTGCGG AATGCTCTTCGATCGCATCGAAGAGTCGAAAGGCCGGATCGTTGTCGTGG CCAGCCTTGGCTACAAAATGGGGATACGGACGATCCAGTTCGACGACATG AACTGGGATAAGAACTATAGCGCCAACCCCGTCTACAGCCAAAGCAAGCT GGCGCAGATGATGTTTGCCTATGAACTCCAAGACCGGGTCAAGCAAAGTA GCAAGAATATCGAGGTCTACGTCTGTCACCCCGAATCGTCGGCCACATCT CTCATCACCACCAGCGGCGGCCTTGTCACAAGGATCGCGTTCTACCTCAT GTCCCTATCTCCGATGGTTCAATCGGCTGACAAAGGCGCTTACCCGGAAG TTATGTGTGCCACCGAAAACGGCTTGGAACAGCGCGCCCTTTATGGTCCC ACAGGCCGCATGGAGTGGGTCGGACCAGTAGGGAAAGGCACGCTAGAAGC CTTCGCCTACGACAAGGCTGTGATGGCAAAACTGTGGAGCCGATCAGAGA AGGAAACGGGGTTCAGTTGGAGCTTGTGAGTGAGCGAAAAGCGTGCGAAG CGTCATTTTCCCGGCACCCGATACTGATCTGCGGTGACCCTGGGTATCAA TAAAATGGCGGACGCTCGTGATGTAAACAGATACAAGGGTTTTGATGCCA ACTTTATTATTTCTCCTTCGGCCTCTGACGAAGCTCCCGACACAAGAATT CCTCGATTCGGATTTCGCCAGCAAGTGAAACGACCGGCGTTCTGTTTCCG GTGCGGTGATGGTGTGTGCTGGTGCTCTTGTCATGCGCGTGATACTACTG TAGTCTAGGACGCAGGAGAGCGTCACTCTGTCTCCGACGGAGGCGGAGTA CGTAGCCATGTTGGATAGGTTGCAGGAGGTCATTGTACGGGCGATATCGC TGGAAATTTGTTTTATCTTTCCGGGCAGGAACGTTGGGTACACAGCAGTA GCGATTTACGAGGAAGTTTCGGGCTCTATCCGCTTGGCCGTTAAACCAGT TGCTTATTCACCACCCTTCCTCCGTGCGCGTTTATCTCGGGGCGAATTGA TTCTTTGTCGGGAGCCGTGTTTATCATTCTGTGTGTTTTTTTTCGTCATT TTTCCATGCCTGCTTTCGTTTCTGGTTGCAGGCCACCTCTCATTGTTTCA GTAACTTGTTTTGAGGGACATGCGGCTTTGTTTCAGCGGAGGGGCCGTTC TTGTTGTACCCTGACAGTTTTGTAACCACCCATTTTGCTTGTGTTCTCTT TGTTTTTTCTGGTGTCGCTGCTGGACTGCAAAAAAAATCCTGTACCTGGC AAGGGGATGCTAGTTGCAGTAGCAGCAGAGTGCTTTGGGAGTTTTTTCAT GTGGTTTTCACGGCGAATGCAATTTTTTGTTTCGAGATGCACAGACGTGT GGAAATGGCTGACAGATTATCACGTTTTGTGTTGACATTTGAGAAGTGTG CAAATGTGTGTTGTTTTGCCGTCGTCTTCGATATGGATGCCGCAACAGGA GGGCATTTTATTTTGGTTCATGGAGAGGAATCTAAGCTCCAGTGTTTTTT ATGAAGGTTTTGCCTGACGTTGTCTGACACATTGGACTCTCTACTTACTT AATCGGTTTGCTGGGTTTTGCTTGTTGTCACCTGGTATGTATCATTGCGA TGTTTTCGTACTTCGGCATATCTTTATCTCACGGCAGAGAATCTTTTCTC ACGCTTCATGTAGGAGGCTCGTCGGTACATTACCGCGCATCCCCGAGGAC GACCAGCCACCCGCGGCGTCTCCCAGTACTTTCTTGTAAGCTGTTTAGCG CATTTTTTTGTCCCCTCGATAAAGAGGTAGATGTAGACACGATAGGAACA ACGTTTGAAACACGTTTGAATGAGTTGTGTATGTACGACTATTGGTGAAA CAGCTTCATTAATTTATAAGTCACGTCTTGTCCTCTTGTTAATTGTTCAA TTGTTTGAGAGAGTTGATGGTGAGCACACTACAGAAGACACAAGTGGTGG GCGGGTGACGACGGC
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1087:1394..10058+

>mRNA_E-siliculosus-1a_F_contig1087.593.1 ID=mRNA_E-siliculosus-1a_F_contig1087.593.1|Name=mRNA_E-siliculosus-1a_F_contig1087.593.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1896bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1087:1394..10058+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGCAGAAACTCAATTCGGACCGGAGGGCTGGACACCCGAGCGCCTCGG
CAACCTTGCGGGCAAGACCTACCTAATCACCGGGGCCAACGCCGGTGTAG
GATTTCAGGCATCTCGAATCCTTCTGTCGAAGGGCGCAAAGGTGGTGATG
TTGAACCGCAGCGTCGAGAAATCGGCTGCCGCGGTCAAAGACCTGAACGA
GGAATTTGGGGCGGGTGCTGATGTTAGCTTTGTCCGCATGGACCTGGCCG
AGCTTGCGAGCGTCCGCGAGGCGGCGGCAGAGGTGTTGAAGACCGTTCCA
CAGATCGATACGCTTATCTGCAACGCCGCCATTGCGCAAGTACCGTCGCA
GAAGCTCACCAAGGATGGCTTCGAAAGCCAACTTGGCACCAACCATTACG
GCCATTTCGTCCTGTGCGGAATGCTCTTCGATCGCATCGAAGAGTCGAAA
GGCCGGATCGTTGTCGTGGCCAGCCTTGGCTACAAAATGGGGATACGGAC
GATCCAGTTCGACGACATGAACTGGGATAAGAACTATAGCGCCAACCCCG
TCTACAGCCAAAGCAAGCTGGCGCAGATGATGTTTGCCTATGAACTCCAA
GACCGGGTCAAGCAAAGTAGCAAGAATATCGAGGTCTACGTCTGTCACCC
CGAATCGTCGGCCACATCTCTCATCACCACCAGCGGCGGCCTTGTCACAA
GGATCGCGTTCTACCTCATGTCCCTATCTCCGATGGTTCAATCGGCTGAC
AAAGGCGCTTACCCGGAAGTTATGTGTGCCACCGAAAACGGCTTGGAACA
GCGCGCCCTTTATGGTCCCACAGGCCGCATGGAGTGGGTCGGACCAGTAG
GGAAAGGCACGCTAGAAGCCTTCGCCTACGACAAGGCTGTGATGGCAAAA
CTGTGGAGCCGATCAGAGAAGGAAACGGGGTTCAGTTGGAGCTTGTGAAT
GGCAGAAACTCAATTCGGACCGGAGGGCTGGACACCCGAGCGCCTCGGCA
ACCTTGCGGGCAAGACCTACCTAATCACCGGGGCCAACGCCGGTGTAGGA
TTTCAGGCATCTCGAATCCTTCTGTCGAAGGGCGCAAAGGTGGTGATGTT
GAACCGCAGCGTCGAGAAATCGGCTGCCGCGGTCAAAGACCTGAACGAGG
AATTTGGGGCGGGTGCTGATGTTAGCTTTGTCCGCATGGACCTGGCCGAG
CTTGCGAGCGTCCGCGAGGCGGCGGCAGAGGTGTTGAAGACCGTTCCACA
GATCGATACGCTTATCTGCAACGCCGCCATTGCGCAAGTACCGTCGCAGA
AGCTCACCAAGGATGGCTTCGAAAGCCAACTTGGCACCAACCATTACGGC
CATTTCGTCCTGTGCGGAATGCTCTTCGATCGCATCGAAGAGTCGAAAGG
CCGGATCGTTGTCGTGGCCAGCCTTGGCTACAAAATGGGGATACGGACGA
TCCAGTTCGACGACATGAACTGGGATAAGAACTATAGCGCCAACCCCGTC
TACAGCCAAAGCAAGCTGGCGCAGATGATGTTTGCCTATGAACTCCAAGA
CCGGGTCAAGCAAAGTAGCAAGAATATCGAGGTCTACGTCTGTCACCCCG
AATCGTCGGCCACATCTCTCATCACCACCAGCGGCGGCCTTGTCACAAGG
ATCGCGTTCTACCTCATGTCCCTATCTCCGATGGTTCAATCGGCTGACAA
AGGCGCTTACCCGGAAGTTATGTGTGCCACCGAAAACGGCTTGGAACAGC
GCGCCCTTTATGGTCCCACAGGCCGCATGGAGTGGGTCGGACCAGTAGGG
AAAGGCACGCTAGAAGCCTTCGCCTACGACAAGGCTGTGATGGCAAAACT
GTGGAGCCGATCAGAGAAGGAAACGGGGTTCAGTTGGAGCTTGTGA
back to top