prot_E-siliculosus-1a_F_contig1085.591.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1085.591.1
Unique Nameprot_E-siliculosus-1a_F_contig1085.591.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length1134
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1085.591.1 vs. uniprot
Match: D7G7T4_ECTSI (Protein binding protein, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7T4_ECTSI)

HSP 1 Score: 1242 bits (3214), Expect = 0.000e+0
Identity = 1083/1150 (94.17%), Postives = 1090/1150 (94.78%), Query Frame = 0
Query:    1 MVLPAWMTQNKGVQPVAGGLGSDKAVAAGMTVQEQQRAPGGLQDAALSRFSPAPRAPAPAPASTKPPPSVGGARPGAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------RGXXXXXXXGRAGLGFTPPPGAAPAQRATSSFSSXXVSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPPYGRPPMAPGMAPXXXXXXXVAPVAHGWTEHKAPDGRPYYYNSITRVSSYDKPVELKTPQEKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGKKGKPVVAKVEYNTEEEKKEAFVEMLKECEVTSTTKWPETQRYCQSDPRWELLRKGSRRQTWTEYQNKRRKEEAEEKRSKAKKARMGFMKMLAQNTQIDGRSRWDEAERTLRDDARFKAVPDSADREDLFNEFVEALTKKEKEDRRAAQKLASERFVEFLEEEYLSLGITFRTTWRDSRDVIERKAPAETDVLEDSDRRRLLDDLVTKLCKAEDDRKARERDERRRQDRLRREDFKEFLQGMVEENAITADTTWKDLKRSIEEEDAYKAMDDQPGGARDVFDDIVADLRRQFRDDKRCVEALMEEAKFVVTPETKQLEFEAALLAHEDDKCAEYEQKQKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-SRRRDRRDKGDKKKDKAADDPPPKRVFQEILDKRAVNLGIVFEALVEKAQVKRKEEEXXXXRREKKFGDLLEDYFYRSDHVDIDWEQGRDKIGKHSVVKEMEEDDCKRMFDEHMSMLKEKMAKKAARQEQMRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRSYSDRSYSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRSRSPDSPYQSYSAPVEKHKXXXXXXXXXXXXXXXXXXKDKDRHSSKHGDKDSXXXHASAAPSNSRKDSMAVDSADDEEGQVDVNKGKKEKENGDSEGTSPATKRPRVGADKEADGGXXXXXNGSPEKRVAAPERAHKVEENGNGSAPVPL 1133
            MVLPAWMTQNKGVQPVAGGLGSDKAVAAGMTVQEQQRAPGGLQDAALSRFS APRAPA  PASTKPPPSVGGARP   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                R XXXXXXXGRAGLGFTPPPGAAPAQRATSSF  XX   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      VPPYGRPPMAPGMAPXXXXXXXVAPVAHGWTEHKAPDGRPYYYNSITRVSSYDKPVELKTPQEKA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         GGKKGKP VAKVEYNTEEEKKEAFVEMLKECEVTSTTKWPETQRYCQSDPRWELLRKGSRRQTWTEYQNKRRKEEAEEKRSKAKKARMGFMKMLAQNTQIDGRSRWDEAERTLRDDARFKAVPDSADREDLFNEFVEALTKKEKEDRRAAQKLASERFVEFLEEEYLSLGITFRTTWRDSRDVIERKAPAETDVLED+DRRRLLDDLVTKLCKAEDDRKARERDERRRQDRLRREDFKEFLQGMVEENAITADTTWKDLKRSIEEE+AYKAMDDQPGGARDVFDDIVADLRRQFRDDKRCVEALMEEAKFVVTPETKQLEFEAALLAHEDDKCAEYEQKQKAA   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SRRRDRRD+GDKKKDKAADDPPPKRVFQEILDKRAVNLGIVFEALVEKAQVKRKEEEXXXXRREKKFGDLLEDYFYRSDHVDIDWEQGRDKIGKHSVVKEMEEDDCKRMFDEHMSMLKEKMAKKAARQEQMRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRSYSDRSYSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRSRSPDSPYQSYSAPVEKHKXXXXXXXXXXXXXXXXXXKDKDRHSSKHGDKDSXXXHASAA SNSRKDSMAVDSADDEEGQ+DV+KGKKE    + EGTSPATKRPRVGADKEADGG     +GSPEKRVAAPERAHKVEENGNGSAPVPL
Sbjct:   18 MVLPAWMTQNKGVQPVAGGLGSDKAVAAGMTVQEQQRAPGGLQDAALSRFSQAPRAPAATPASTKPPPSVGGARPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRXXXXXXXXGRAGLGFTPPPGAAPAQRATSSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------VPPYGRPPMAPGMAPXXXXXXXVAPVAHGWTEHKAPDGRPYYYNSITRVSSYDKPVELKTPQEKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNK------GGKKGKPAVAKVEYNTEEEKKEAFVEMLKECEVTSTTKWPETQRYCQSDPRWELLRKGSRRQTWTEYQNKRRKEEAEEKRSKAKKARMGFMKMLAQNTQIDGRSRWDEAERTLRDDARFKAVPDSADREDLFNEFVEALTKKEKEDRRAAQKLASERFVEFLEEEYLSLGITFRTTWRDSRDVIERKAPAETDVLEDNDRRRLLDDLVTKLCKAEDDRKARERDERRRQDRLRREDFKEFLQGMVEENAITADTTWKDLKRSIEEEEAYKAMDDQPGGARDVFDDIVADLRRQFRDDKRCVEALMEEAKFVVTPETKQLEFEAALLAHEDDKCAEYEQKQKAAKEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRRRDRRDRGDKKKDKAADDPPPKRVFQEILDKRAVNLGIVFEALVEKAQVKRKEEEXXXXRREKKFGDLLEDYFYRSDHVDIDWEQGRDKIGKHSVVKEMEEDDCKRMFDEHMSMLKEKMAKKAARQEQMRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRSYSDRSYSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRSRSPDSPYQSYSAPVEKHKXXXXXXXXXXXXXXXXXXKDKDRHSSKHGDKDSXXXHASAAASNSRKDSMAVDSADDEEGQIDVDKGKKEXXXXEGEGTSPATKRPRVGADKEADGG-----DGSPEKRVAAPERAHKVEENGNGSAPVPL 1150          
BLAST of mRNA_E-siliculosus-1a_F_contig1085.591.1 vs. uniprot
Match: A0A835ZHL9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHL9_9STRA)

HSP 1 Score: 256 bits (654), Expect = 7.120e-67
Identity = 205/585 (35.04%), Postives = 289/585 (49.40%), Query Frame = 0
Query:  341 VVAKVEYNTEEEKKEAFVEMLKECEVTSTTKWPETQRYCQSDPRWELLRKGSRRQTWTEYQNKRRKEEAEEKRSKAKKARMGFMKMLAQNTQIDGRSRWDEAERTLRDDARFKAVPDSADREDLFNEFVEALTKKEKEDRRAAQKLASERFVEFLE-EEYLSLGITFRTTWRD-SRDVIERKAPAET-DVLEDSDRRRLLDDLVTKLCKAEDDRKARERDERRRQDRLRREDFKEFLQGMVEENAITADTTWKDLKR--------------------------SIEEEDAYKAMDDQ-PGGARDVFDDIVADLRRQFRDDKRCVEALMEEAKFVVTPETKQLEFEAALLAHEDDKCAEYEQKQKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRRRDRRDKGDKKKDKAADDPPPKRVFQEILDKRAVNLGIVFEALVEKAQVKRKEEEXXXXRREKKFGDLLEDYFYRSDHVDIDWEQGRDKIGKHSV--VKEMEEDDCKRMFDEHMSMLKEKMAKKAARQEQMR 893
            V+   EY T ++KKEAF+ +L + EVTS TKW + ++ C  DPRW +L+KG RRQT TEYQN RRKEEA+E+R++AKKA+  F+KMLA N  IDG +RW EA+  L  D RF+ V D   RE++F EF E L K+++E+    +K A   + E +       L IT  T W + S  + +  AP     V+ ++++R +  + VTKL   E++++ R       +D   R+ F+ FL+  ++   ITADT WKDL+                            IE E  Y+AM+ Q P   RDVFD IV +LRRQFRDD+R +E L  EAKF VTPET Q +F   L+A E     +   + KA                                                                                             + GD + + A  D P +R+ QE+  KR VN+ + F+AL+E+A V RKE+E    R EK F +LL + FYRSDHV   WE  R K+ K     V E+ ED  + +F+EHM  L+E MA++A RQE+++
Sbjct:  371 VIDIAEYKTFKQKKEAFMSLLADEEVTSGTKWADIEKACAEDPRWLVLKKGERRQTATEYQNMRRKEEAKEERARAKKAKDAFLKMLATNFSIDGNTRWTEAKDLLASDIRFQNVQDDRIREEIFMEFTEELRKRDREEESKRRKQALAAYAELVAGANQAGLNITHTTKWSEVSMALADMAAPDPLLSVITETEKRGIFQEHVTKLLSEEEEKRVRXXXXXXXEDARNRKAFEAFLRAKLDAGGITADTKWKDLRAXXXXXXXXXXXXXXXXXXXXXXXXXXEIEHEPEYEAMERQGPTSQRDVFDVIVDELRRQFRDDRRLMEDLAREAKFAVTPETTQDQFMDILVATEWKLICDKHPRLKALEEAHREKLQAREAAKAEAGIENGDAAENGDENG-----------------------------------------------------------ENGDSEYEVAMRDAPARRM-QEMATKRRVNVELTFKALMERAIVARKEQERKRARLEKDFRELLLECFYRSDHVTATWETARTKLQKRGPTGVLELPEDAQQVLFEEHMIKLREAMAERAERQEKLK 895          
BLAST of mRNA_E-siliculosus-1a_F_contig1085.591.1 vs. uniprot
Match: W7TPS7_9STRA (Pre-mrna-processing factor 40 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPS7_9STRA)

HSP 1 Score: 177 bits (448), Expect = 1.420e-41
Identity = 168/566 (29.68%), Postives = 267/566 (47.17%), Query Frame = 0
Query:  347 YNTEEEKKEAFVEMLKECEVTSTTKWPETQRYCQSDPRWELLRKGSRRQTWTEYQNKRRKEEAEEKRSKAKKARMGFMKMLAQNTQIDGRSRWDEAERTLRDDARFKAVPDSA-DREDLFNEFVEALTKKEKEDRRAAQKLASERFVEFL--------EEEYLSLG-----ITFRTTWRDSRDVIERKAPAETD-----VLEDSDRRRLLDDLVTKLCKAEDDRKARERDERRRQDRLRREDFKEFLQGMVEENAITADTTWKDLKRSIEEEDAYKAMDDQPG-GARDVFDDIVADLRRQFRDDKRCVEALMEEAKFVVTPETKQLEFEAALLAHEDDKCAEYEQKQKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRRRDRRDKGDKKKDKAADDPPPKRVFQEILDKRAVNLGIVFEALVEKAQVKRKEEEXXXXRREKKFGDLLEDYFYRSDHVDIDWEQGRDKIGKHSVVKEMEEDDCKRMFDEHMSMLKEKMAKKAARQEQM 892
            + T EE   AF +ML +  V+ST KW +  +     P W  L+ G ++Q + EYQ KR KEE          AR GF+KMLA+  QID +SRW EAE  L++D RFK+   +  D+ED+F++FV  L KKEKE++R  QK  +     +         EE     G     +    +WR+++ V++ +A  E +     ++E+ D++   +D++ +L  A  ++K  ER+ERR+ +  RR  F+E L+G+ E+  +   + WK LK  IE+EDAYK M  Q G  A ++F+  V DL+ ++ +DKR +   +  A   VT E  Q  +  A+L     K    E++    XXXXXXXX                                                                              RR  RR                 + F+E+  +R  ++   FE L  +A   R+EE     +R  ++ DLL +Y++RSDHVD+ W + ++ + +HS   ++E ++ K +F+EHM+ML+ KM KK   Q+++
Sbjct:  282 FGTTEEAVAAFKQMLYDKGVSSTAKWADIPKMLSKQPVWSALKTGEKKQAFAEYQTKRMKEEXXXXXXXXXXARDGFLKMLAECVQIDSQSRWQEAEELLKEDPRFKSSELALHDKEDVFHDFVTELAKKEKEEKRLNQKAFAGLLRRYAGLSPPGEGEEGAAESGEEGPALRRGMSWREAQAVLDVRARGEEEGRLRELVEEVDQKHAFEDVLEELEVAHREQKRLEREERRKLEEGRRRAFREVLEGLAEDGVVDMRSRWKHLKPVIEKEDAYKVMMGQGGLTAAELFERFVDDLKGRYAEDKRRLRDYLPRAGAEVTAEWDQETYVNAILKALGGKTEGKEERXXXXXXXXXXXXGAGSRGLES--------------------------------------------------------------------GRRTSRR----------------LQEFKEMFARRPKHVEAAFEELHTRAVEMREEEARRREKRRCRYRDLLLEYYWRSDHVDVTWAEAQEDLERHSAYNDLEPEERKALFEEHMAMLQAKMEKKKKSQKEL 763          
BLAST of mRNA_E-siliculosus-1a_F_contig1085.591.1 vs. uniprot
Match: A0A6S9FUY3_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FUY3_HETAK)

HSP 1 Score: 166 bits (421), Expect = 1.120e-39
Identity = 160/534 (29.96%), Postives = 240/534 (44.94%), Query Frame = 0
Query:  356 AFVEMLKECEVTSTTKWPETQRYCQSDPRWELLRK-GSRRQTWTEYQNKRRKEEAEEKRSKAKKARMGFMKMLAQNTQIDGRSRWDEAERTLRDDARFKAVPDSADREDLFNEFVEALTKKEKEDRRAAQKLASERFVEFLEEEYLSLGITFRTTWRDSRDVIERKAPAET-DVLEDSDRRRLLDDLVTKLCKAEDDRKARERDERRRQDRLRREDFKEFLQGMVEENAITADTTWKDLKRSIEEEDAYKAMDDQPG---GARDVFDDIVADLRRQFRDDKRCVEALMEEAKFVVTPETKQLEFEAALLAHEDDKCAEYEQKQKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRRRDRRDKGDKKKDKAADDPPPKRVFQEILDKRAVNLGIVFEALVEKAQVKRKEEEXXXXRREKKFGDLLEDYFYRSDHVDIDWEQGRDKIGKHSVVKEMEEDDCKRMFDEHMSMLKEKMAK 884
            AF EML E  V STTKW +  + C+ D RW  L   G RRQ   EYQ KR +EE EEKR +A++AR GF+KMLA+NT+ID  +RW EAE  L  DARF AV D+ADREDLF +FV  L KKEKE+++AA+K A +   E+L  +    G+T ++ ++D  D ++ KA +   D L+  D R L +D + +L K E+ R                         +  E  IT ++ + D + ++ E + Y A+ +       A+DVF + V +L+ QF+ D+R VE  + ++   V     Q   E A    + +K  E  +K++                                                                                                              KR    +  KR  ++  VFE ++++A+ +R    XXXX  E+ F +LLED++YRSDHV + W      + +    +++EED  K +F+EHM+ L+EKM K
Sbjct:   42 AFKEMLLERGVASTTKWSDAVKACEGDKRWRALGTLGERRQALAEYQTKRLREEKEEKRLRARRARDGFLKMLAENTRIDSTTRWREAEDILGKDARFGAVEDTADREDLFKDFVTELGKKEKEEKKAARKEAKKALEEYLAAD--GTGLTHKSRFKDLYDDLKDKARSRGWDALDKDDMRDLFEDRIKELKKIEEKRAXXXXXXXXXXXXXXXXXXXXXXXXLSGEGKITHESKFADHEEALAENEGYIALKEDKTLKLKAKDVFAEFVDELKDQFKKDRRVVEDAVRDSGLKV-----QHFSELAAWVRDLEKWEEDHEKKE-------------------------------------------------------------------------------------------------------------DKRPLTRLQAKRPWHVREVFEHMLKRAKEERXXXXXXXXXXEQAFRELLEDFYYRSDHVGLKWSSASRDLDRERAYRDLEEDRRKALFEEHMAGLEEKMPK 459          
BLAST of mRNA_E-siliculosus-1a_F_contig1085.591.1 vs. uniprot
Match: UPI001493CAD7 (pre-mRNA-processing protein 40A isoform X2 n=1 Tax=Setaria viridis TaxID=4556 RepID=UPI001493CAD7)

HSP 1 Score: 145 bits (367), Expect = 5.480e-32
Identity = 111/323 (34.37%), Postives = 172/323 (53.25%), Query Frame = 0
Query:  345 VEYNTEEEKKEAFVEMLKECEVTSTTKWPETQRYCQSDPRWELLRK-GSRRQTWTEYQNKRRKEEAEEKRSKAKKARMGFMKMLAQNTQIDGRSRWDEAERTLRDDARFKAVPDSADREDLFNEFVEALTKKEKEDRRAAQKLASERFVEFLEEEYLSLGITFRTTWRDSRDVIERKAPAETDVLEDSDRRRLLDDLVTKLCKAEDDRKARERDERRRQDRLRREDFKEFLQGMVEENAITADTTWKDLKRSIEEEDAYKAMDDQPGGA--RDVFDDIVADLRRQFRDDKRCVEALMEEAKFVVTPETKQLEFEAALLAHEDD 664
            V Y T+ E K AF  +L+   V S   W +T R   +D R+  L+  G R+Q + EY N+R+K EAEEKR K +KAR  F+ ML +  ++   +RW +A     DD RFKAV    +REDLF  ++  L KKEK       +     +  FLE       I   T WR  ++ +E         LE  DR  +  D +  L K E+++K  +++  RRQ+R  R+ F++ L+  V +  +TA T W+D    I+E  AY A+     G+  +++FDD++ +L +Q+ DDK C++ +++  K  +T      EF+ A+L  EDD
Sbjct:  418 VVYATKTEAKNAFKSLLESVNVESDWTWEQTMRVIINDKRYGALKTLGERKQAFNEYLNQRKKFEAEEKRIKQRKARDDFLAMLEECKELTSSTRWSKAILMFEDDERFKAVERPREREDLFEGYLVELHKKEKAKAIEEHRRHVAEYKAFLES---CDFIKATTQWRKVQERLEDDERCSR--LEKIDRLNVFQDYIRYLEKEEEEQKRIQKEHVRRQERKNRDGFRKMLEEHVNDGTLTAKTRWRDYCSQIKESQAYLAVASNTSGSTPKELFDDVIEELDKQYLDDKTCIKEVVKSGKIPMTTSWTLEEFQTAIL--EDD 733          
BLAST of mRNA_E-siliculosus-1a_F_contig1085.591.1 vs. uniprot
Match: K3ZQD8_SETIT (Uncharacterized protein n=35 Tax=Panicoideae TaxID=147369 RepID=K3ZQD8_SETIT)

HSP 1 Score: 145 bits (365), Expect = 1.650e-31
Identity = 111/323 (34.37%), Postives = 172/323 (53.25%), Query Frame = 0
Query:  345 VEYNTEEEKKEAFVEMLKECEVTSTTKWPETQRYCQSDPRWELLRK-GSRRQTWTEYQNKRRKEEAEEKRSKAKKARMGFMKMLAQNTQIDGRSRWDEAERTLRDDARFKAVPDSADREDLFNEFVEALTKKEKEDRRAAQKLASERFVEFLEEEYLSLGITFRTTWRDSRDVIERKAPAETDVLEDSDRRRLLDDLVTKLCKAEDDRKARERDERRRQDRLRREDFKEFLQGMVEENAITADTTWKDLKRSIEEEDAYKAMDDQPGGA--RDVFDDIVADLRRQFRDDKRCVEALMEEAKFVVTPETKQLEFEAALLAHEDD 664
            V Y T+ E K AF  +L+   V S   W +T R   +D R+  L+  G R+Q + EY N+R+K EAEEKR K +KAR  F+ ML +  ++   +RW +A     DD RFKAV    +REDLF  ++  L KKEK       +     +  FLE       I   T WR  ++ +E         LE  DR  +  D +  L K E+++K  +++  RRQ+R  R+ F++ L+  V +  +TA T W+D    I+E  AY A+     G+  +++FDD++ +L +Q+ DDK C++ +++  K  +T      EF+ A+L  EDD
Sbjct:  418 VVYATKTEAKNAFKSLLESVNVESDWTWEQTMRVIINDKRYGALKTLGERKQAFNEYLNQRKKFEAEEKRIKQRKARDDFLAMLEECKELTSSTRWSKAILMFDDDERFKAVERPREREDLFEGYLVELHKKEKAKAIEEHRRHVAEYKAFLES---CDFIKATTQWRKVQERLEDDERCSR--LEKIDRLNVFQDYIRYLEKEEEEQKRIQKEHVRRQERKNRDGFRKMLEEHVNDGTLTAKTRWRDYCSQIKESQAYLAVASNTSGSTPKELFDDVIEELDKQYLDDKTCIKEVVKSGKIPMTTSWTLEEFQTAIL--EDD 733          
BLAST of mRNA_E-siliculosus-1a_F_contig1085.591.1 vs. uniprot
Match: UPI001C4F9E92 (pre-mRNA-processing protein 40A-like isoform X2 n=1 Tax=Macadamia integrifolia TaxID=60698 RepID=UPI001C4F9E92)

HSP 1 Score: 143 bits (360), Expect = 6.870e-31
Identity = 101/315 (32.06%), Postives = 174/315 (55.24%), Query Frame = 0
Query:  347 YNTEEEKKEAFVEMLKECEVTSTTKWPETQRYCQSDPRWELLRK-GSRRQTWTEYQNKRRKEEAEEKRSKAKKARMGFMKMLAQNTQIDGRSRWDEAERTLRDDARFKAVPDSADREDLFNEFVEALTKKEKEDRRAAQKLASERFVEFLEEEYLSLGITFRTTWRDSRDVIERKAPAETDVLEDSDRRRLLDDLVTKLCKAEDDRKARERDERRRQDRLRREDFKEFLQGMVEENAITADTTWKDLKRSIEEEDAYKAMDDQPGGA--RDVFDDIVADLRRQFRDDKRCVEALMEEAKFVVTPETKQLEFEAAL 658
            Y T++E K AF  +L+   V S   W +T R   +D R+  L+  G R+Q + EY  +R+K+EAEE+R + KKAR  F KML ++ ++   +RW +A     DD RFKAV  + DREDLF  ++  L KKE+   +  QK     + +FLE       I   + WR  +D +E         LE  DR  +  + +  L K E+++K  +++ +RR +R  R++F++ L+G V +  +TA T W+D    +++  AY A+     G+  +D+F+D+V +L +++ +DK  ++  M+  K  ++      +F+A++
Sbjct:  439 YATKQEAKNAFKALLESVNVESDWTWEQTMRVIITDKRYGALKTLGERKQAFNEYLGQRKKQEAEERRIRQKKAREEFTKMLEESKELTSSTRWSKAISMFEDDERFKAVERARDREDLFENYLVELEKKERVKAQEEQKRNVMEYRQFLES---CDFIKANSQWRKVQDRLEDDERCSR--LEKIDRLEIFQEYIRDLEKEEEEQKKIQKEHQRRAERKNRDEFRKLLEGHVADGTVTAKTHWRDYFIKVKDSPAYTAVSSNTSGSTPKDLFEDVVEELEKKYHEDKSRIKDGMKLGKINISSSWTLEDFKASI 748          
BLAST of mRNA_E-siliculosus-1a_F_contig1085.591.1 vs. uniprot
Match: A0A2T7ERB0_9POAL (Uncharacterized protein n=9 Tax=Panicum TaxID=4539 RepID=A0A2T7ERB0_9POAL)

HSP 1 Score: 142 bits (359), Expect = 8.600e-31
Identity = 108/318 (33.96%), Postives = 170/318 (53.46%), Query Frame = 0
Query:  345 VEYNTEEEKKEAFVEMLKECEVTSTTKWPETQRYCQSDPRWELLRK-GSRRQTWTEYQNKRRKEEAEEKRSKAKKARMGFMKMLAQNTQIDGRSRWDEAERTLRDDARFKAVPDSADREDLFNEFVEALTKKEKEDRRAAQKLASERFVEFLEEEYLSLGITFRTTWRDSRDVIERKAPAETDVLEDSDRRRLLDDLVTKLCKAEDDRKARERDERRRQDRLRREDFKEFLQGMVEENAITADTTWKDLKRSIEEEDAYKAMDDQPGGA--RDVFDDIVADLRRQFRDDKRCVEALMEEAKFVVTPETKQLEFEAALL 659
            V Y T+ E K AF  +L+   V S   W +T R   +D R+  L+  G R+Q + EY N+R+K EAEEKR K +KAR  F+ ML +  ++   +RW +A     DD RFKAV    +REDLF  ++  L KKEK       +     +  FLE       I   T WR  ++ +E         LE  DR  +  + +  L K E+++K  ++++ RRQ+R  R+ F++ L+  V +  ITA T W+D    I++  AY A+     G+  +++FDD++ +L +Q+ DDK  V+ +++  K  +T   K  EF+ A+L
Sbjct:  416 VVYATKAEAKNAFKSLLESVNVESDWTWDQTMRVIINDKRYGALKTLGERKQAFNEYLNQRKKFEAEEKRIKQRKARDDFLAMLEECKELTSSTRWSKAILMFEDDERFKAVERPREREDLFENYLVELHKKEKAKALEEHRRHLAEYKAFLES---CDFIKATTQWRKVQERLEDDERCSR--LEKIDRLNIFQEYIRHLEKEEEEQKRIQKEQVRRQERKNRDAFRKMLEEHVTDGTITAKTRWRDYCSQIKDSQAYLAVASNTSGSTPKELFDDVIEELDKQYLDDKTRVKEVVKSGKIPMTTSWKLEEFQTAIL 728          
BLAST of mRNA_E-siliculosus-1a_F_contig1085.591.1 vs. uniprot
Match: A0A5N6PDM7_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6PDM7_9ASTR)

HSP 1 Score: 140 bits (353), Expect = 4.120e-30
Identity = 107/321 (33.33%), Postives = 177/321 (55.14%), Query Frame = 0
Query:  347 YNTEEEKKEAFVEMLKECEVTSTTKWPETQRYCQSDPRWELLRK-GSRRQTWTEYQNKRRKEEAEEKRSKAKKARMGFMKMLAQNTQIDGRSRWDEAERTLRDDARFKAVPDSADREDLFNEFVEALTKKEKEDRRAAQKLASERFVEFLEEEYLSLGITFRTTWRDSRDVIERKAPAETDVLEDSDRRRLLDDLVTKLCKAEDDRKARERDERRRQDRLRREDFKEFLQGMVEENAITADTTWKDLKRSIEEEDAYKAMDDQPGGA--RDVFDDIVADLRRQFRDDKRCVEALMEEAKFVVTPETKQLEFEAALLAHEDD 664
            Y +++E K AF  +L+E  V S   W +  R   +D R+  L+  G R+Q + EY  +R+K EAEE+R K +KA+  F KML ++ ++    RW +A     DD R+KAV  SADREDLF  ++  L KKE+   +  Q+ +   + +FLE   L   I   T WR  +D +E         LE  DR  +  + +  L K ED+++  +++  +R +R  R++F++ L+  V    +TA T W+D  + ++E  AY+A+     G+  RD+F+D+V +L +++ +DK  V+  ++  K  V P     +F+AA+   EDD
Sbjct:  380 YASKQEAKIAFKALLEESNVKSDWSWEQAMRVIINDKRYGALKAHGERKQAFNEYLMQRKKLEAEERRLKQRKAKEEFTKMLEESKELTSSMRWSKAMALFEDDERYKAVDRSADREDLFQNYLVDLQKKERAKIQEEQRQSRLEYRQFLETCGL---IKVDTQWRKVQDRLEDDERCSR--LEKIDRLEIFQEYIRDLEKEEDEQRKIKKEHIKRVERKNRDEFRKMLEENVVSGTLTAKTQWRDYCQKVKESVAYQAVASNTSGSTPRDLFEDVVEELEKKYHEDKSHVKDSIKSKKITVLPTWTFEDFKAAV---EDD 692          
BLAST of mRNA_E-siliculosus-1a_F_contig1085.591.1 vs. uniprot
Match: UPI001CC796F2 (pre-mRNA-processing protein 40A-like isoform X2 n=6 Tax=Proteaceae TaxID=4328 RepID=UPI001CC796F2)

HSP 1 Score: 140 bits (352), Expect = 6.580e-30
Identity = 102/315 (32.38%), Postives = 171/315 (54.29%), Query Frame = 0
Query:  347 YNTEEEKKEAFVEMLKECEVTSTTKWPETQRYCQSDPRWELLRK-GSRRQTWTEYQNKRRKEEAEEKRSKAKKARMGFMKMLAQNTQIDGRSRWDEAERTLRDDARFKAVPDSADREDLFNEFVEALTKKEKEDRRAAQKLASERFVEFLEEEYLSLGITFRTTWRDSRDVIERKAPAETDVLEDSDRRRLLDDLVTKLCKAEDDRKARERDERRRQDRLRREDFKEFLQGMVEENAITADTTWKDLKRSIEEEDAYKAMDDQPGGA--RDVFDDIVADLRRQFRDDKRCVEALMEEAKFVVTPETKQLEFEAAL 658
            Y T++E K AF  +L+   V S   W +T R   +D R+  L+  G R+Q + EY  +R+K+EAEE+R + KKAR  F KML ++ ++   +RW +      DD RFKAV  + DREDLF  ++  L KKE+   +  QK     F +FLE       I   + WR  +D +E         LE  DR  +  + +  L K E+++K  ++  +RR +R  R++F++ L+G V +  +TA T W+D    +++  AY A+     G+  +D+F+D+V +L +Q+ +DK  ++  M+  K  +       +F+A++
Sbjct:  479 YATKQEAKNAFKAVLESVNVESDWTWEQTMRIIINDKRYGALKTLGERKQAFNEYLGQRKKQEAEERRIRQKKAREEFTKMLEESEELTSSTRWSKVISMFEDDERFKAVERARDREDLFENYLVELQKKERAKAQEEQKRNIMEFRQFLES---CDFIKANSQWRKVQDRLEDDERCSR--LEKIDRLEIFQEYIRDLEKEEEEQKKIQKXXQRRIERKNRDEFRKLLEGHVADGMLTAKTRWRDYFMKVKDLPAYIAVSSNASGSTPKDLFEDVVEELEKQYHEDKTRIKDGMKLGKINIASSWALEDFKASI 788          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1085.591.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7T4_ECTSI0.000e+094.17Protein binding protein, putative n=2 Tax=Ectocarp... [more]
A0A835ZHL9_9STRA7.120e-6735.04Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7TPS7_9STRA1.420e-4129.68Pre-mrna-processing factor 40 n=3 Tax=Monodopsidac... [more]
A0A6S9FUY3_HETAK1.120e-3929.96Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
UPI001493CAD75.480e-3234.37pre-mRNA-processing protein 40A isoform X2 n=1 Tax... [more]
K3ZQD8_SETIT1.650e-3134.37Uncharacterized protein n=35 Tax=Panicoideae TaxID... [more]
UPI001C4F9E926.870e-3132.06pre-mRNA-processing protein 40A-like isoform X2 n=... [more]
A0A2T7ERB0_9POAL8.600e-3133.96Uncharacterized protein n=9 Tax=Panicum TaxID=4539... [more]
A0A5N6PDM7_9ASTR4.120e-3033.33Uncharacterized protein n=1 Tax=Mikania micrantha ... [more]
UPI001CC796F26.580e-3032.38pre-mRNA-processing protein 40A-like isoform X2 n=... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 998..1018
NoneNo IPR availableCOILSCoilCoilcoord: 805..827
NoneNo IPR availableCOILSCoilCoilcoord: 877..914
NoneNo IPR availableCOILSCoilCoilcoord: 659..679
NoneNo IPR availableGENE3D2.20.70.10coord: 235..298
e-value: 2.5E-14
score: 54.5
IPR002713FF domainSMARTSM00441FF_2coord: 350..403
e-value: 2.0E-8
score: 44.0
coord: 484..543
e-value: 5.7
score: 11.5
coord: 416..471
e-value: 4.4E-8
score: 42.9
coord: 563..622
e-value: 3.6E-4
score: 29.9
IPR002713FF domainPFAMPF01846FFcoord: 418..468
e-value: 6.1E-13
score: 48.7
coord: 567..618
e-value: 1.9E-7
score: 31.1
coord: 352..396
e-value: 4.5E-11
score: 42.7
IPR002713FF domainPROSITEPS51676FFcoord: 562..622
score: 9.835
IPR002713FF domainPROSITEPS51676FFcoord: 484..543
score: 7.013
IPR002713FF domainPROSITEPS51676FFcoord: 415..471
score: 8.672
IPR002713FF domainPROSITEPS51676FFcoord: 347..403
score: 10.037
IPR001202WW domainSMARTSM00456ww_5coord: 245..277
e-value: 8.4E-10
score: 48.6
IPR001202WW domainPFAMPF00397WWcoord: 248..275
e-value: 3.2E-9
score: 36.7
IPR001202WW domainPROSITEPS01159WW_DOMAIN_1coord: 250..275
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 244..277
score: 12.63
IPR036517FF domain superfamilyGENE3D1.10.10.440coord: 406..476
e-value: 4.3E-19
score: 70.2
IPR036517FF domain superfamilyGENE3D1.10.10.440coord: 552..633
e-value: 4.8E-12
score: 48.0
coord: 477..551
e-value: 1.1E-6
score: 30.7
IPR036517FF domain superfamilyGENE3D1.10.10.440coord: 338..405
e-value: 7.2E-16
score: 59.8
IPR036517FF domain superfamilySUPERFAMILY81698FF domaincoord: 344..409
IPR036517FF domain superfamilySUPERFAMILY81698FF domaincoord: 555..629
IPR036517FF domain superfamilySUPERFAMILY81698FF domaincoord: 410..478
IPR039726Pre-mRNA-processing factor Prp40PANTHERPTHR11864PRE-MRNA-PROCESSING PROTEIN PRP40coord: 296..777
coord: 116..288
coord: 796..988
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 237..278

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1085contigE-siliculosus-1a_F_contig1085:27734..37698 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1085.591.1mRNA_E-siliculosus-1a_F_contig1085.591.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1085 27704..37820 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1085.591.1 ID=prot_E-siliculosus-1a_F_contig1085.591.1|Name=mRNA_E-siliculosus-1a_F_contig1085.591.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=1134bp
MVLPAWMTQNKGVQPVAGGLGSDKAVAAGMTVQEQQRAPGGLQDAALSRF
SPAPRAPAPAPASTKPPPSVGGARPGAPPGAPPGAPPTAPPAAPPTAPPG
APPTAPPGAPPRGAPPTRPPGRAGLGFTPPPGAAPAQRATSSFSSPPVSR
GAPPPVSAQQPAPQQQQHQQRQPQQHQQQHQQHHHNQAAPMYNMPPQQHH
PMYHHGQQPPTMGGVPPMMMVPPYGRPPMAPGMAPPRLAPPPVAPVAHGW
TEHKAPDGRPYYYNSITRVSSYDKPVELKTPQEKAAAAAAAAAAAAAQPA
ASSAPAAKPTTPPEKAASPSESSANGTGGGKNKGGKKGKPVVAKVEYNTE
EEKKEAFVEMLKECEVTSTTKWPETQRYCQSDPRWELLRKGSRRQTWTEY
QNKRRKEEAEEKRSKAKKARMGFMKMLAQNTQIDGRSRWDEAERTLRDDA
RFKAVPDSADREDLFNEFVEALTKKEKEDRRAAQKLASERFVEFLEEEYL
SLGITFRTTWRDSRDVIERKAPAETDVLEDSDRRRLLDDLVTKLCKAEDD
RKARERDERRRQDRLRREDFKEFLQGMVEENAITADTTWKDLKRSIEEED
AYKAMDDQPGGARDVFDDIVADLRRQFRDDKRCVEALMEEAKFVVTPETK
QLEFEAALLAHEDDKCAEYEQKQKAAKEAAAAAGGKGEDKDDGSKEKEKA
KANGKGKDKDGSEDGSRRGRSRSRSRSRSGDRRRRNSRSRSRSDSRSRSR
SGSRGRGGGRGSRRRDRRDKGDKKKDKAADDPPPKRVFQEILDKRAVNLG
IVFEALVEKAQVKRKEEERQRERREKKFGDLLEDYFYRSDHVDIDWEQGR
DKIGKHSVVKEMEEDDCKRMFDEHMSMLKEKMAKKAARQEQMRLEREAKR
KEREEREKEERDRRSSKRGRSSSRSYSDRSYSRSRSRSRGSSRSDRRSRS
RSVSRSRSLDSRDRSRDRKHHSSSHKKSKKRHRSRSPDSPYQSYSAPVEK
HKKEKKKSKKNKKDKKDKRDKDKDRHSSKHGDKDSKDKHASAAPSNSRKD
SMAVDSADDEEGQVDVNKGKKEKENGDSEGTSPATKRPRVGADKEADGGG
GDGGNGSPEKRVAAPERAHKVEENGNGSAPVPL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036020WW_dom_sf
IPR039726Prp40-like
IPR036517FF_domain_sf
IPR001202WW_dom
IPR002713FF_domain