prot_E-siliculosus-1a_F_contig1082.571.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1082.571.1
Unique Nameprot_E-siliculosus-1a_F_contig1082.571.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length157
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1082.571.1 vs. uniprot
Match: D8LRX7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRX7_ECTSI)

HSP 1 Score: 286 bits (732), Expect = 2.310e-97
Identity = 148/157 (94.27%), Postives = 153/157 (97.45%), Query Frame = 0 
Query:    1 MNFSGFQSMGDVGGLLALEGSGNTERKPVELARALELQANAFSGRDVKSITVAALSRNTYTLPAANIIAAVLKELPNLIKIDFSDIIDAAQLNTGTAVFKAFCEGVYDKKVSLFDMGENTLTPESVEDCRPIIESDHMRDLLLVNSDLSGPSMIQLT 157
            MNF+GFQSMGDVGGLLALEGSGNT+RKPVELARALELQANAFSGRD K ITVAALSRNTYTLPAANIIAAVLKELP+LIKIDFSDIIDAAQ NTGT VFKAFCEGVYDKK+SLFDMGENTLTPESVEDCRPIIESDHMRDLLLVNS+LSGPSMIQLT
Sbjct:    1 MNFNGFQSMGDVGGLLALEGSGNTKRKPVELARALELQANAFSGRDAKFITVAALSRNTYTLPAANIIAAVLKELPSLIKIDFSDIIDAAQNNTGTGVFKAFCEGVYDKKISLFDMGENTLTPESVEDCRPIIESDHMRDLLLVNSNLSGPSMIQLT 157
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1082.571.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LRX7_ECTSI2.310e-9794.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 34..157
e-value: 1.2E-6
score: 29.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1082contigE-siliculosus-1a_F_contig1082:5033..8376 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1082.571.1mRNA_E-siliculosus-1a_F_contig1082.571.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1082 5033..8376 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1082.571.1 ID=prot_E-siliculosus-1a_F_contig1082.571.1|Name=mRNA_E-siliculosus-1a_F_contig1082.571.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=157bp
MNFSGFQSMGDVGGLLALEGSGNTERKPVELARALELQANAFSGRDVKSI
TVAALSRNTYTLPAANIIAAVLKELPNLIKIDFSDIIDAAQLNTGTAVFK
AFCEGVYDKKVSLFDMGENTLTPESVEDCRPIIESDHMRDLLLVNSDLSG
PSMIQLT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf