prot_E-siliculosus-1a_F_contig1076.532.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_F_contig1076.532.1
Unique Name	prot_E-siliculosus-1a_F_contig1076.532.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length	616

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig1076.532.1 vs. uniprot
Match: D7G7U6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7U6_ECTSI)

HSP 1 Score: 883 bits (2282), Expect = 0.000e+0
Identity = 533/597 (89.28%), Postives = 538/597 (90.12%), Query Frame = 0

Query:   19 MENTNSSHDLSFDVLGVLPTFPTTTPLEPSLIGSHTRTARPQSHHSYALGGEGIASAGTGGSTESGLEQGFERESYDSDQELEAIRGSVRSLRAQRAAVEKLKEKARXXXXXXXXXXXXXXEAEEKVRELRAQGGRDVVRRLMDEVTELRARLKATSTAFQTRENSVAELREAVQTLTLDLRAGQEKARAQSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKCAASGRELASLSALLREANATLDASKGSMQATVAKQAEKLEAARNEKESLLFEKGQTQERVKELTSMCERQRSKLADAGHRARELERLASAAKKETRLAQEQAAKLKTELSAVDKRRREEDAGATIKLRTAARQVEELRSEVVLVKSEAAEKARQLVRHRDEMSAFREDVSKLREAAVQQGDMRQAVRDRDETIRDLRRQLELERRERGQWGQARKQLLLEFCEEENKLRSTLQPAQHHEPRSTRRQGRKQAALEHAPPTGSDRRLTRDKPLSRHATIRNIRTNGDSRRGSANSSLTGEACVAREEEKVFGDSEAGEVLLDLAGGGVRNGGTGTLGGYEEGSSSRTMASDEFEMRPGQQLSQQA 615
            MENTNSS DLSFDVLGVLPT PTTTPLEPSLIGSHTRT RPQSHHSYALGGEGIAS GTGGSTESGLEQGFERESYDSDQELEAIRGSVRSLRAQRAAVEKLKEKAR XXXXXXXXXXXXX         RAQGGRDVVRRLMDEVTELRARLKATSTAFQTRENSVA+LREAVQTLTLDLRAGQEKARAQSR                                      ++CAASGRELASLSALLREANATLDASKGSMQATVAKQAEKLEAAR EKESLLFEKGQTQERVKELTSMCERQRSKLADAGHRARELERLASAAKKETRLAQEQAAKLKTELSA DKRRREEDAGATIKLRTAARQVEELRSEVVLVKSEAAEKARQLVRHRDEMSAFREDVSKLREAAVQQGDMRQAVRDRDETIRDLRRQLELERRERGQWGQARKQLLLEFCEEENKLRSTLQPAQH EPRSTRRQGRKQA LEHAPPTGSDRRLTR KPLSRHATIRNIRTNGDSRR SANSSL GEACVAREEEKVFGDSEAGEVLLDLAGGGVR+GGTGTLGGYEEG+SSRTMASDEFEMRPGQQLSQQA
Sbjct:    1 MENTNSSQDLSFDVLGVLPTVPTTTPLEPSLIGSHTRTGRPQSHHSYALGGEGIAS-GTGGSTESGLEQGFERESYDSDQELEAIRGSVRSLRAQRAAVEKLKEKARLXXXXXXXXXXXXXXXXXXXXXXRAQGGRDVVRRLMDEVTELRARLKATSTAFQTRENSVADLREAVQTLTLDLRAGQEKARAQSRKLE-----------------------------------QQCAASGRELASLSALLREANATLDASKGSMQATVAKQAEKLEAARKEKESLLFEKGQTQERVKELTSMCERQRSKLADAGHRARELERLASAAKKETRLAQEQAAKLKTELSAADKRRREEDAGATIKLRTAARQVEELRSEVVLVKSEAAEKARQLVRHRDEMSAFREDVSKLREAAVQQGDMRQAVRDRDETIRDLRRQLELERRERGQWGQARKQLLLEFCEEENKLRSTLQPAQHQEPRSTRRQGRKQAILEHAPPTGSDRRLTRHKPLSRHATIRNIRTNGDSRRSSANSSLRGEACVAREEEKVFGDSEAGEVLLDLAGGGVRDGGTGTLGGYEEGNSSRTMASDEFEMRPGQQLSQQA 561

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig1076.532.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig1076.532.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7G7U6_ECTSI	0.000e+0	89.28	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 157..177
None	No IPR available	COILS	Coil	Coil	coord: 379..427
None	No IPR available	COILS	Coil	Coil	coord: 185..247
None	No IPR available	COILS	Coil	Coil	coord: 277..311
None	No IPR available	COILS	Coil	Coil	coord: 107..151
None	No IPR available	COILS	Coil	Coil	coord: 438..458
None	No IPR available	COILS	Coil	Coil	coord: 319..360

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig1076	contig	E-siliculosus-1a_F_contig1076:3905..9373 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig1076.532.1	mRNA_E-siliculosus-1a_F_contig1076.532.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	mRNA	E-siliculosus-1a_F_contig1076 3905..9373 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1076.532.1 ID=prot_E-siliculosus-1a_F_contig1076.532.1|Name=mRNA_E-siliculosus-1a_F_contig1076.532.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=616bp
SGSWTLGRDRDRDCRDTGMENTNSSHDLSFDVLGVLPTFPTTTPLEPSLI
GSHTRTARPQSHHSYALGGEGIASAGTGGSTESGLEQGFERESYDSDQEL
EAIRGSVRSLRAQRAAVEKLKEKARLQEGTAEKLKRKLREAEEKVRELRA
QGGRDVVRRLMDEVTELRARLKATSTAFQTRENSVAELREAVQTLTLDLR
AGQEKARAQSRKLEQQGRESQEQQVTIARLEESCARCEERAEMAEKTAEE
KCAASGRELASLSALLREANATLDASKGSMQATVAKQAEKLEAARNEKES
LLFEKGQTQERVKELTSMCERQRSKLADAGHRARELERLASAAKKETRLA
QEQAAKLKTELSAVDKRRREEDAGATIKLRTAARQVEELRSEVVLVKSEA
AEKARQLVRHRDEMSAFREDVSKLREAAVQQGDMRQAVRDRDETIRDLRR
QLELERRERGQWGQARKQLLLEFCEEENKLRSTLQPAQHHEPRSTRRQGR
KQAALEHAPPTGSDRRLTRDKPLSRHATIRNIRTNGDSRRGSANSSLTGE
ACVAREEEKVFGDSEAGEVLLDLAGGGVRNGGTGTLGGYEEGSSSRTMAS
DEFEMRPGQQLSQQA*