prot_E-siliculosus-1a_M_contig98.17697.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_M_contig98.17697.1
Unique Name	prot_E-siliculosus-1a_M_contig98.17697.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length	228

Homology

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BLAST of mRNA_E-siliculosus-1a_M_contig98.17697.1 vs. uniprot
Match: A0A6H5L0C1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L0C1_9PHAE)

HSP 1 Score: 371 bits (953), Expect = 9.020e-129
Identity = 208/226 (92.04%), Postives = 216/226 (95.58%), Query Frame = 0

Query:    2 MALAALHSRGLQACSRVALRAAIAPRTQQLSPAAGAAGARRLLSSPAPTGAPSPTAAAKGQSQLHRGKKAEGEDRRLWPYLKAARQQFFNVILATLSIVMAVKMVEGKGARVALEEEMVELQRRQGVLLRSLSDEAWAEDVAKRVGAAGGKEAVMAEMEKVVAASLLDKETAELEAMRAAALKTSLEQQKHGAPCPGGMGAFADEQPREASASPVAPKPAPSKGMM 227
            M L AL SRGLQACS VA+RAAIAP+TQQL+PA G AGARRLLSSPAPTGAPSPTAAAKGQSQLHRGKKAEGE+RRLWPYLKAARQQFFNVILATLSIVMAVKMVEGKGARVALEEEMVELQR+QGVLLRSLSDEAWAEDVAKR+GAAGGKEAVM E+EKVVAASLLDKETAELEAMRAAALKTSLEQQKHGAP PGG+GAF DEQPREASASPVA KPAPSKGMM
Sbjct:    1 MVLTALRSRGLQACSHVAMRAAIAPQTQQLAPAEGVAGARRLLSSPAPTGAPSPTAAAKGQSQLHRGKKAEGEERRLWPYLKAARQQFFNVILATLSIVMAVKMVEGKGARVALEEEMVELQRQQGVLLRSLSDEAWAEDVAKRIGAAGGKEAVMVEIEKVVAASLLDKETAELEAMRAAALKTSLEQQKHGAPYPGGVGAFDDEQPREASASPVARKPAPSKGMM 226

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_M_contig98.17697.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_M_contig98.17697.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description
A0A6H5L0C1_9PHAE	9.020e-129	92.04	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29

ZOOM

x 1

POSITION

0


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 105..125
None	No IPR available	COILS	Coil	Coil	coord: 170..190
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 3..14
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 15..21
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..2
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 22..227
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..21

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_M_contig98	contig	E-siliculosus-1a_M_contig98:136451..141403 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_M_contig98.17697.1	mRNA_E-siliculosus-1a_M_contig98.17697.1	Ectocarpus siliculosus Ec864m_EcPH12_78m male	mRNA	E-siliculosus-1a_M_contig98 136346..141549 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_M_contig98.17697.1 ID=prot_E-siliculosus-1a_M_contig98.17697.1|Name=mRNA_E-siliculosus-1a_M_contig98.17697.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=228bp
MMALAALHSRGLQACSRVALRAAIAPRTQQLSPAAGAAGARRLLSSPAPT
GAPSPTAAAKGQSQLHRGKKAEGEDRRLWPYLKAARQQFFNVILATLSIV
MAVKMVEGKGARVALEEEMVELQRRQGVLLRSLSDEAWAEDVAKRVGAAG
GKEAVMAEMEKVVAASLLDKETAELEAMRAAALKTSLEQQKHGAPCPGGM
GAFADEQPREASASPVAPKPAPSKGMM*