Homology
BLAST of mRNA_E-siliculosus-1a_M_contig96.17551.1 vs. uniprot
Match:
A0A6H5L5F6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5F6_9PHAE)
HSP 1 Score: 161 bits (407), Expect = 1.600e-48
Identity = 86/88 (97.73%), Postives = 86/88 (97.73%), Query Frame = 0
Query: 1 MSSTMRSPEITRSPARVAGAGAGGRNLQSIGRQRSLVEDHPDSERIPARTVCAAFSLLVLGLILLCVSANFFAMKHPGSVAFLVLGIV 88
MSSTMRSPEITRSPARVA AGAG RNLQSIGRQRSLVEDHPDSERIPARTVCAAFSLLVLGLILLCVSANFFAMKHPGSVAFLVLGIV
Sbjct: 1 MSSTMRSPEITRSPARVADAGAGERNLQSIGRQRSLVEDHPDSERIPARTVCAAFSLLVLGLILLCVSANFFAMKHPGSVAFLVLGIV 88
BLAST of mRNA_E-siliculosus-1a_M_contig96.17551.1 vs. uniprot
Match:
D7G3N7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3N7_ECTSI)
HSP 1 Score: 116 bits (291), Expect = 4.130e-30
Identity = 60/63 (95.24%), Postives = 63/63 (100.00%), Query Frame = 0
Query: 1 MSSTMRSPEITRSPARVAGAGAGGRNLQSIGRQRSLVEDHPDSERIPARTVCAAFSLLVLGLI 63
MSSTMRSPEI+RSPARVAGAGAGGRNLQSIGRQRSLVEDHPD+ERIPARTVCAAFSLLVLGL+
Sbjct: 1 MSSTMRSPEISRSPARVAGAGAGGRNLQSIGRQRSLVEDHPDNERIPARTVCAAFSLLVLGLL 63
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig96.17551.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90 )
Total hits: 2
M S S T M R S P E I T R S P A R V A G A G A G G R N L Q S I G R Q R S L V E D H P D S E R I P A R T V C A A F S L L V L G L I L L C V S A N F F A M K H P G S V A F L V L G I V G K C N P Q S L F V I L S L S C L W G R G V R G K A E D G R P S L L T Q S N D F C V L V L S Q L Y I Y M P P Y N S R L * 20 40 60 80 100 120 140 Expect = 1.60e-48 / Id = 97.73 Expect = 4.13e-30 / Id = 95.24 Sequence A0A6H5L5F6_9PHAE D7G3N7_ECTSI
Match Name E-value Identity Description
A0A6H5L5F6_9PHAE 1.600e-48 97.73 Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more] D7G3N7_ECTSI 4.130e-30 95.24 Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
M S S T M R S P E I T R S P A R V A G A G A G G R N L Q S I G R Q R S L V E D H P D S E R I P A R T V C A A F S L L V L G L I L L C V S A N F F A M K H P G S V A F L V L G I V G K C N P Q S L F V I L S L S C L W G R G V R G K A E D G R P S L L T Q S N D F C V L V L S Q L Y I Y M P P Y N S R L * 20 40 60 80 100 120 140 Score = Score = Score = Score = Score = Score = Score = Score = Score = Sequence CYTOPLASMIC_DOMAIN TRANSMEMBRANE CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN TRANSMEMBRANE NON_CYTOPLASMIC_DOMAIN TRANSMEMBRANE TMhelix TMhelix
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 101..120 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 121..140 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 1..50 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 141..147 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 79..100 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 74..78 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 51..73 None No IPR available TMHMM TMhelix coord: 51..73 None No IPR available TMHMM TMhelix coord: 83..105
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_E-siliculosus-1a_M_contig96.17551.1 ID=prot_E-siliculosus-1a_M_contig96.17551.1|Name=mRNA_E-siliculosus-1a_M_contig96.17551.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=148bp back to top