Homology
BLAST of mRNA_E-siliculosus-1a_M_contig95.17517.1 vs. uniprot
Match:
D7G1W0_ECTSI (tRNA_int_end_N2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1W0_ECTSI)
HSP 1 Score: 937 bits (2423), Expect = 0.000e+0
Identity = 488/538 (90.71%), Postives = 506/538 (94.05%), Query Frame = 0
Query: 1 MAMVRAAASAAAXSSDATEWAEGLGGGQGDNPGRPGRQTCWAVWHEELAVFEVPQPRGDSLRSMGTTWRSRLMLHAEEGLWLVERGMLAVHPFSPAPKKSYDPTGTASPAAPSSGIGRKDDARGMHDETDISSSTPEIAQEMRNIEHEEKENEGGGQEGLTDDVDSAAGKNACPIPPRAELSPIDSGVILTGEPQHSLDPVAFGETAWTGQGGGCRKAPIAAKEGRQRAGCKRSRPGQGRGERVVRPAPALSVSVSTLHETVLSRAGVPWECYRAYAELKRRSYVVRRQPEDTVGHDETAPRAAPLSWFQGTGATTTSNNKLITAASHTSSPSSSLPVTFHVYNNPSGCSSSFRKRDPGPPDALLVVCRFGEPMPDHRSLVALVELHANMQMEMSTSQQWRRRGREDRTAGVVSGLGPDEATPDRDSGSQEVPTSGLESERVTSSGGQESGQKGSLLDEDRQNRQAGTVPDQEKGLDGGRTRGRLTTEGGESSTLALSEGVEKLSTPGIKLAVVSGEAQVQLFDVGLHDAREAAELSS 538
MAMVRA ASA+A SS ATEWAEGLGGGQGD+PGRPGRQTCWAVWHEELAVFEV QPRGDSLRSMGTTWRSRLMLHAEEGLWLVERGMLAVHPFSPAPKK++DPTGTASPAAPSSGIGRK+DAR MHDET ISSSTPEIAQEMRNIEHEEKENEGGGQEGLTDDVDS+AGKNA PIPPRAELSPIDSGVILTGE QHSLDPVA GETA TGQGGGCRK P AAKEGRQRAGCKRSRPGQGRGERVVRPA ALSVSVSTL+E VL+RAGVPWECYR YAELKRRSYVVRRQPEDTVGHD+TAPRAAPLSWFQGTGAT TSNNKLITAA+HTSSPSSSLPVTFHVY+NPSGCSSSFRKRDPGPPDAL+VVCRFG+PMPDHRSLVALVELHANMQM+MS SQQWRRRGRED TAGVVS LGPDEA PDR SGS EVPTSGLESERVTS GG+ESGQKGSLLDEDRQ RQA T+PDQ+KGLDGGRTRGRLTTEG TLA S+GVEKLSTPGIKLAVVSGEAQVQLFDVGLHDA EAAEL S
Sbjct: 1 MAMVRATASASAASSAATEWAEGLGGGQGDDPGRPGRQTCWAVWHEELAVFEVLQPRGDSLRSMGTTWRSRLMLHAEEGLWLVERGMLAVHPFSPAPKKNHDPTGTASPAAPSSGIGRKNDAREMHDETGISSSTPEIAQEMRNIEHEEKENEGGGQEGLTDDVDSSAGKNARPIPPRAELSPIDSGVILTGESQHSLDPVASGETARTGQGGGCRKVPTAAKEGRQRAGCKRSRPGQGRGERVVRPAAALSVSVSTLYEMVLARAGVPWECYRTYAELKRRSYVVRRQPEDTVGHDDTAPRAAPLSWFQGTGATKTSNNKLITAANHTSSPSSSLPVTFHVYSNPSGCSSSFRKRDPGPPDALVVVCRFGDPMPDHRSLVALVELHANMQMKMSMSQQWRRRGREDSTAGVVSDLGPDEAAPDRGSGSPEVPTSGLESERVTSGGGRESGQKGSLLDEDRQKRQARTLPDQKKGLDGGRTRGRLTTEGSGGRTLAFSKGVEKLSTPGIKLAVVSGEAQVQLFDVGLHDALEAAELPS 538
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig95.17517.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90 )
Total hits: 1
M A M V R A A A S A A A A S S D A T E W A E G L G G G Q G D N P G R P G R Q T C W A V W H E E L A V F E V P Q P R G D S L R S M G T T W R S R L M L H A E E G L W L V E R G M L A V H P F S P A P K K S Y D P T G T A S P A A P S S G I G R K D D A R G M H D E T D I S S S T P E I A Q E M R N I E H E E K E N E G G G Q E G L T D D V D S A A G K N A C P I P P R A E L S P I D S G V I L T G E P Q H S L D P V A F G E T A W T G Q G G G C R K A P I A A K E G R Q R A G C K R S R P G Q G R G E R V V R P A P A L S V S V S T L H E T V L S R A G V P W E C Y R A Y A E L K R R S Y V V R R Q P E D T V G H D E T A P R A A P L S W F Q G T G A T T T S N N K L I T A A S H T S S P S S S L P V T F H V Y N N P S G C S S S F R K R D P G P P D A L L V V C R F G E P M P D H R S L V A L V E L H A N M Q M E M S T S Q Q W R R R G R E D R T A G V V S G L G P D E A T P D R D S G S Q E V P T S G L E S E R V T S S G G Q E S G Q K G S L L D E D R Q N R Q A G T V P D Q E K G L D G G R T R G R L T T E G G E S S T L A L S E G V E K L S T P G I K L A V V S G E A Q V Q L F D V G L H D A R E A A E L S S * 50 100 150 200 250 300 350 400 450 500 Expect = 0.00e+0 / Id = 90.71 Sequence D7G1W0_ECTSI
Match Name E-value Identity Description
D7G1W0_ECTSI 0.000e+0 90.71 tRNA_int_end_N2 domain-containing protein n=2 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
M A M V R A A A S A A A A S S D A T E W A E G L G G G Q G D N P G R P G R Q T C W A V W H E E L A V F E V P Q P R G D S L R S M G T T W R S R L M L H A E E G L W L V E R G M L A V H P F S P A P K K S Y D P T G T A S P A A P S S G I G R K D D A R G M H D E T D I S S S T P E I A Q E M R N I E H E E K E N E G G G Q E G L T D D V D S A A G K N A C P I P P R A E L S P I D S G V I L T G E P Q H S L D P V A F G E T A W T G Q G G G C R K A P I A A K E G R Q R A G C K R S R P G Q G R G E R V V R P A P A L S V S V S T L H E T V L S R A G V P W E C Y R A Y A E L K R R S Y V V R R Q P E D T V G H D E T A P R A A P L S W F Q G T G A T T T S N N K L I T A A S H T S S P S S S L P V T F H V Y N N P S G C S S S F R K R D P G P P D A L L V V C R F G E P M P D H R S L V A L V E L H A N M Q M E M S T S Q Q W R R R G R E D R T A G V V S G L G P D E A T P D R D S G S Q E V P T S G L E S E R V T S S G G Q E S G Q K G S L L D E D R Q N R Q A G T V P D Q E K G L D G G R T R G R L T T E G G E S S T L A L S E G V E K L S T P G I K L A V V S G E A Q V Q L F D V G L H D A R E A A E L S S * 50 100 150 200 250 300 350 400 450 500 Expect = 9.3E-10 / Score = 38.5 Score = Score = Score = Score = Score = Score = Sequence PF12928 PTHR21027 SIGNAL_PEPTIDE_N_REGION NON_CYTOPLASMIC_DOMAIN SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION
IPR Term IPR Description Source Source Term Source Description Alignment
IPR024336 tRNA-splicing endonuclease, subunit Sen54, N-terminal PFAM PF12928 tRNA_int_end_N2 coord: 37..90 IPR024337 tRNA-splicing endonuclease, subunit Sen54 PANTHER PTHR21027 TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN54 coord: 41..412 None No IPR available PHOBIUS SIGNAL_PEPTIDE_N_REGION Signal peptide N-region coord: 1..5 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 22..538 None No IPR available PHOBIUS SIGNAL_PEPTIDE Signal Peptide coord: 1..21 None No IPR available PHOBIUS SIGNAL_PEPTIDE_C_REGION Signal peptide C-region coord: 14..21 None No IPR available PHOBIUS SIGNAL_PEPTIDE_H_REGION Signal peptide H-region coord: 6..13
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_E-siliculosus-1a_M_contig95.17517.1 ID=prot_E-siliculosus-1a_M_contig95.17517.1|Name=mRNA_E-siliculosus-1a_M_contig95.17517.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=539bp back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
Term Definition
IPR024337 tRNA_splic_suSen54 IPR024336 tRNA_splic_suSen54_N