Homology
BLAST of mRNA_E-siliculosus-1a_M_contig95.17491.1 vs. uniprot
Match: A0A6H5KL80_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL80_9PHAE) HSP 1 Score: 126 bits (316), Expect = 1.980e-32 Identity = 92/102 (90.20%), Postives = 94/102 (92.16%), Query Frame = 0 Query: 16 AVALVAALLPFDRARVQAAAPGASPEGRQGAGAAKRHKGSRKRXXXXXXXXXXXX---RPEDARFNGTRHDNGTDAGAAAAGAEDTDGTAEVDVAVVRSDRT 114
AVALVAALLPFDRARVQA APGASP+GRQGAGAAKRHKGSRKRXXXXXXXXXXXX RPE ARFNGTR+DN TDAGAA GAEDTDGTAEVDVAVVRSDRT
Sbjct: 22 AVALVAALLPFDRARVQATAPGASPKGRQGAGAAKRHKGSRKRXXXXXXXXXXXXXXXRPERARFNGTRYDNDTDAGAA--GAEDTDGTAEVDVAVVRSDRT 121
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig95.17491.1 vs. uniprot
Analysis Date: 2022-09-16 ( Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
| Match Name | E-value | Identity | Description | |
|---|
| A0A6H5KL80_9PHAE | 1.980e-32 | 90.20 | Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... | [more] |
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_H_REGION | Signal peptide H-region | coord: 13..24 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 34..114 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_N_REGION | Signal peptide N-region | coord: 1..12 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE | Signal Peptide | coord: 1..33 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_C_REGION | Signal peptide C-region | coord: 25..33 |
| None | No IPR available | SIGNALP_EUK | SignalP-noTM | SignalP-noTM | coord: 1..33
score: 0.569 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_E-siliculosus-1a_M_contig95.17491.1 ID=prot_E-siliculosus-1a_M_contig95.17491.1|Name=mRNA_E-siliculosus-1a_M_contig95.17491.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=114bp
MPTTAGSRRCRSAAAAVALVAALLPFDRARVQAAAPGASPEGRQGAGAAK
RHKGSRKRSGGGGGGGGGGGRPEDARFNGTRHDNGTDAGAAAAGAEDTDG
TAEVDVAVVRSDRT back to top
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