Homology
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 35..58 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 100..194 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 79..99 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_N_REGION | Signal peptide N-region | coord: 1..1 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 195..217 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_H_REGION | Signal peptide H-region | coord: 2..13 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 218..303 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE | Signal Peptide | coord: 1..25 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 59..78 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_C_REGION | Signal peptide C-region | coord: 14..25 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 26..34 |
| None | No IPR available | TMHMM | TMhelix | | coord: 195..217 |
| None | No IPR available | TMHMM | TMhelix | | coord: 2..21 |
| None | No IPR available | TMHMM | TMhelix | | coord: 79..101 |
| None | No IPR available | TMHMM | TMhelix | | coord: 36..58 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_E-siliculosus-1a_M_contig94.17431.1 ID=prot_E-siliculosus-1a_M_contig94.17431.1|Name=mRNA_E-siliculosus-1a_M_contig94.17431.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=304bp
MVLSASVLWSVFVFTFHVTAWKTRASLQTPLFPLMMTAVACGAVAALGTL
RLWLFVLPSRLMRKTSIPTVIKAWSDDRHGLPCLCVCYATWLLAVGIVGR
FNSFSLTLSKAIRDSERSTPKAAPSPSSHESSPVARAVTAKGLIIGLRER
LTCGGIGGIDGGVRGGGAAGVVPKTAGAYAKTKSMLKKLTVDTPLVFFMT
LYTTMPSVWLIVAMRFLARDSTSTGTAAAAPSPPPRSAFLLPTVKPSSNI
SSGGCNGDDGDGGQGCRKKNNERLPSFLQGALLRVASKYRDSRQVCVRVT
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