Homology
BLAST of mRNA_E-siliculosus-1a_M_contig94.17402.1 vs. uniprot
Match:
D7FIN9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIN9_ECTSI)
HSP 1 Score: 476 bits (1226), Expect = 2.170e-167
Identity = 265/275 (96.36%), Postives = 269/275 (97.82%), Query Frame = 0
Query: 81 RPRQSAWTVRGGYKHGSSATASSSGSNSSNSVGQDGFPPRGETTAVDSNMDKLAADLRATRXXXXXXXXXXXXXXXXXXXXXXXKIVDEVLRERSPEAFGELGGHASSYDSATAGMDVANRRSFFLGIRRVLLLVQVVELLAACMWQAAFPFGGLAGFITAASTTNGEGDTPNTAVLATLRDIFAGEAGDGRGPLGLALAACLAQFSVYTMLLVWFGCDRVVLRGVRVTAWEHGAAAVWALTRLMTGPGGKLTHLLACAWLAGMAFLCAYFGRQL 355
RPRQSAWTVRGGYKHGSSATAS+SGSNSSNSVGQDGFPPRGETTAVDSN+DKLAADLRATR XXXXXXXXXXXXXXXXXXXXXKIVDEVLRERSPEAFGELGGHASSYDSATAGMDVANRRSFFLGIRRVLLLVQVVELLAACMWQAAFPFGGLAGFITAAST NGEG TPNTAVL TLRDI AGEAGDGRGPLGLALAACLAQFSVYTMLLVWFGCDRVVLRGVRVTAWEHGAAAVWALTRL+TGPGGKLTHL+ACAWLAGMAFLCAYFGRQL
Sbjct: 2 RPRQSAWTVRGGYKHGSSATASNSGSNSSNSVGQDGFPPRGETTAVDSNIDKLAADLRATRDHXXXXXXXXXXXXXXXXXXXXXKIVDEVLRERSPEAFGELGGHASSYDSATAGMDVANRRSFFLGIRRVLLLVQVVELLAACMWQAAFPFGGLAGFITAASTMNGEGGTPNTAVLDTLRDIVAGEAGDGRGPLGLALAACLAQFSVYTMLLVWFGCDRVVLRGVRVTAWEHGAAAVWALTRLLTGPGGKLTHLVACAWLAGMAFLCAYFGRQL 276
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig94.17402.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90 )
Total hits: 1
M H H P T A H H L T T L C D L T T H T M P P R Y G N T P A K R L R F V G A T L A C L T L M S T G A S V I D E T Y S H Q H C S L Q R R S R T L R S G A Q A W S R T R P R Q S A W T V R G G Y K H G S S A T A S S S G S N S S N S V G Q D G F P P R G E T T A V D S N M D K L A A D L R A T R D H I A A D I H A R G E A I A A D L K G K Q E K I V D E V L R E R S P E A F G E L G G H A S S Y D S A T A G M D V A N R R S F F L G I R R V L L L V Q V V E L L A A C M W Q A A F P F G G L A G F I T A A S T T N G E G D T P N T A V L A T L R D I F A G E A G D G R G P L G L A L A A C L A Q F S V Y T M L L V W F G C D R V V L R G V R V T A W E H G A A A V W A L T R L M T G P G G K L T H L L A C A W L A G M A F L C A Y F G R Q L * 50 100 150 200 250 300 350 Expect = 2.17e-167 / Id = 96.36 Sequence D7FIN9_ECTSI
Match Name E-value Identity Description
D7FIN9_ECTSI 2.170e-167 96.36 Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
M H H P T A H H L T T L C D L T T H T M P P R Y G N T P A K R L R F V G A T L A C L T L M S T G A S V I D E T Y S H Q H C S L Q R R S R T L R S G A Q A W S R T R P R Q S A W T V R G G Y K H G S S A T A S S S G S N S S N S V G Q D G F P P R G E T T A V D S N M D K L A A D L R A T R D H I A A D I H A R G E A I A A D L K G K Q E K I V D E V L R E R S P E A F G E L G G H A S S Y D S A T A G M D V A N R R S F F L G I R R V L L L V Q V V E L L A A C M W Q A A F P F G G L A G F I T A A S T T N G E G D T P N T A V L A T L R D I F A G E A G D G R G P L G L A L A A C L A Q F S V Y T M L L V W F G C D R V V L R G V R V T A W E H G A A A V W A L T R L M T G P G G K L T H L L A C A W L A G M A F L C A Y F G R Q L * 50 100 150 200 250 300 350 Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Score = Sequence TRANSMEMBRANE CYTOPLASMIC_DOMAIN CYTOPLASMIC_DOMAIN TRANSMEMBRANE TRANSMEMBRANE CYTOPLASMIC_DOMAIN NON_CYTOPLASMIC_DOMAIN TRANSMEMBRANE NON_CYTOPLASMIC_DOMAIN TMhelix TMhelix TMhelix
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 275..296 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 1..210 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 353..355 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 332..352 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 308..326 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 297..307 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 327..331 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 211..229 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 230..274 None No IPR available TMHMM TMhelix coord: 332..354 None No IPR available TMHMM TMhelix coord: 275..297 None No IPR available TMHMM TMhelix coord: 211..230
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_E-siliculosus-1a_M_contig94.17402.1 ID=prot_E-siliculosus-1a_M_contig94.17402.1|Name=mRNA_E-siliculosus-1a_M_contig94.17402.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=356bp back to top