prot_E-siliculosus-1a_M_contig93.17363.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male
You are viewing a polypeptide, more information available on the corresponding mRNA page
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig93.17363.1 vs. uniprot
Match: D8LST5_ECTSI (DNA-binding protein HU n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LST5_ECTSI) HSP 1 Score: 273 bits (699), Expect = 2.640e-92 Identity = 148/156 (94.87%), Postives = 153/156 (98.08%), Query Frame = 0 Query: 1 MRCSLLLALAFRAQFGQGFVGPTGGLVLSNCVSVAARSNNNIVRRGVASTSLKAAASDKGSDASVNLRKPAVVEAIAERSNLSKNQAEAALAAFTDVVMQGVADGNKITLQGFGTFEGRARKGRTGRNPRTGEELKIKATTAPAFSASKSFKDMVR 156 M+CSLLLALAFRAQ GQGFVGPTGGLVLSNCVSVAARSNNNIVRRGVASTSLKAAASD+GSDASVNLRKPAVVEAIAERSNL KNQAEAALAAFTDVVMQ VADGNKI+LQGFGTFEGRARKGRTGRNPRTGEELKIKATTAPAFSASK+FKDMV+ Sbjct: 1 MKCSLLLALAFRAQSGQGFVGPTGGLVLSNCVSVAARSNNNIVRRGVASTSLKAAASDEGSDASVNLRKPAVVEAIAERSNLDKNQAEAALAAFTDVVMQEVADGNKISLQGFGTFEGRARKGRTGRNPRTGEELKIKATTAPAFSASKAFKDMVK 156
BLAST of mRNA_E-siliculosus-1a_M_contig93.17363.1 vs. uniprot
Match: A0A835Z9S8_9STRA (DNA-binding protein HU n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9S8_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 6.900e-24 Identity = 51/90 (56.67%), Postives = 67/90 (74.44%), Query Frame = 0 Query: 67 LRKPAVVEAIAERSNLSKNQAEAALAAFTDVVMQGVADGNKITLQGFGTFEGRARKGRTGRNPRTGEELKIKATTAPAFSASKSFKDMVR 156 ++K V +I+ +S LSK Q +AA++AF D VM+ VADG K++L GFGTFE R R R GRNP+TGE L I A+ APAFSA+K+FKD V+ Sbjct: 1 MKKADFVASISAKSGLSKTQTDAAISAFMDTVMEAVADGKKVSLVGFGTFESRERAARQGRNPQTGEALSIPASKAPAFSAAKAFKDRVK 90
BLAST of mRNA_E-siliculosus-1a_M_contig93.17363.1 vs. uniprot
Match: K9RYJ2_SYNP3 (Bacterial nucleoid DNA-binding protein n=1 Tax=Synechococcus sp. (strain ATCC 27167 / PCC 6312) TaxID=195253 RepID=K9RYJ2_SYNP3) HSP 1 Score: 97.4 bits (241), Expect = 1.830e-23 Identity = 48/89 (53.93%), Postives = 67/89 (75.28%), Query Frame = 0 Query: 67 LRKPAVVEAIAERSNLSKNQAEAALAAFTDVVMQGVADGNKITLQGFGTFEGRARKGRTGRNPRTGEELKIKATTAPAFSASKSFKDMV 155 + K +V+A+A+++N++K QAE ++A DV+M VADG+K+TL GFG FE R RK R GRNP+TGE+++I AT PAFSA K FK+ V Sbjct: 1 MNKAELVDAVADKANVTKKQAEVVISAAVDVIMDAVADGDKVTLVGFGAFEPRERKAREGRNPKTGEKMEIPATKVPAFSAGKLFKEKV 89
BLAST of mRNA_E-siliculosus-1a_M_contig93.17363.1 vs. uniprot
Match: A0A6M8B627_9CYAN (HU family DNA-binding protein n=11 Tax=Cyanobacteria TaxID=1117 RepID=A0A6M8B627_9CYAN) HSP 1 Score: 96.3 bits (238), Expect = 3.710e-23 Identity = 49/89 (55.06%), Postives = 67/89 (75.28%), Query Frame = 0 Query: 67 LRKPAVVEAIAERSNLSKNQAEAALAAFTDVVMQGVADGNKITLQGFGTFEGRARKGRTGRNPRTGEELKIKATTAPAFSASKSFKDMV 155 + K +V+A+AE++N++K QA+A L+A D +M+ V+ G K+TL GFG+FE R RK R GRNP+TGE +KI AT PAFSA K FKD+V Sbjct: 1 MNKGELVDAVAEKANVTKKQADAVLSAAIDSIMEAVSKGEKVTLVGFGSFEPRERKEREGRNPKTGEAMKIPATKVPAFSAGKLFKDLV 89
BLAST of mRNA_E-siliculosus-1a_M_contig93.17363.1 vs. uniprot
Match: UPI001A01FA4A (HU family DNA-binding protein n=1 Tax=filamentous cyanobacterium LEGE 11480 TaxID=2777977 RepID=UPI001A01FA4A) HSP 1 Score: 96.3 bits (238), Expect = 4.650e-23 Identity = 49/89 (55.06%), Postives = 66/89 (74.16%), Query Frame = 0 Query: 67 LRKPAVVEAIAERSNLSKNQAEAALAAFTDVVMQGVADGNKITLQGFGTFEGRARKGRTGRNPRTGEELKIKATTAPAFSASKSFKDMV 155 + K +V+AIA ++ ++K +A+A L+A DVVM+ VA +K+TL GFGTFE R R+ R GRNP TG+ +KI ATT PAFSA K FK+MV Sbjct: 1 MNKAELVDAIAAKAEVTKKEADAVLSAMIDVVMESVASNDKVTLVGFGTFEARQRQAREGRNPSTGQPIKIPATTVPAFSAGKGFKEMV 89
BLAST of mRNA_E-siliculosus-1a_M_contig93.17363.1 vs. uniprot
Match: UPI001D0D3D50 (HU family DNA-binding protein n=1 Tax=Synechococcus sp. PCC 7336 TaxID=195250 RepID=UPI001D0D3D50) HSP 1 Score: 95.9 bits (237), Expect = 9.470e-23 Identity = 48/91 (52.75%), Postives = 69/91 (75.82%), Query Frame = 0 Query: 65 VNLRKPAVVEAIAERSNLSKNQAEAALAAFTDVVMQGVADGNKITLQGFGTFEGRARKGRTGRNPRTGEELKIKATTAPAFSASKSFKDMV 155 +++ K +++A+AER+N++K +A+A ++A DV++Q VA K+TL GFG+FE R RK R GRNP+T E++ I ATT PAFSA KSFKD V Sbjct: 17 IHMNKGELIDAVAERANVTKKEADAVISATLDVIVQTVASEEKVTLVGFGSFEPRKRKEREGRNPKTNEKMTIPATTVPAFSAGKSFKDAV 107
BLAST of mRNA_E-siliculosus-1a_M_contig93.17363.1 vs. uniprot
Match: A0A7S1Y344_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y344_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 1.080e-22 Identity = 49/87 (56.32%), Postives = 66/87 (75.86%), Query Frame = 0 Query: 67 LRKPAVVEAIAERSNLSKNQAEAALAAFTDVVMQGVADGNKITLQGFGTFEGRARKGRTGRNPRTGEELKIKATTAPAFSASKSFKD 153 +RKPA+VE +AER SK+++ A+ A D +M+ VADG K+ LQGFGTF+ RK RTGRNP+TGE L+IKA+ P+FSA+K FK+ Sbjct: 66 VRKPALVEMVAERMGTSKSESTQAIEAVVDTIMEVVADGKKLNLQGFGTFKLSERKARTGRNPKTGESLEIKASKTPSFSAAKGFKE 152
BLAST of mRNA_E-siliculosus-1a_M_contig93.17363.1 vs. uniprot
Match: A0A8J6R600_9CYAN (HU family DNA-binding protein n=3 Tax=unclassified Trichocoleus TaxID=2628910 RepID=A0A8J6R600_9CYAN) HSP 1 Score: 94.7 bits (234), Expect = 1.490e-22 Identity = 50/89 (56.18%), Postives = 65/89 (73.03%), Query Frame = 0 Query: 67 LRKPAVVEAIAERSNLSKNQAEAALAAFTDVVMQGVADGNKITLQGFGTFEGRARKGRTGRNPRTGEELKIKATTAPAFSASKSFKDMV 155 + K +V+A+AE++N++K QAEAAL A DV+ VA G+K+TL GFG+FE R R+ R GRNP+TGE + I AT PAFSA K FKD V Sbjct: 1 MNKGELVDAVAEKANVTKKQAEAALTAVFDVIQATVAAGDKVTLVGFGSFEARERQAREGRNPKTGEAMTIPATKVPAFSAGKLFKDKV 89
BLAST of mRNA_E-siliculosus-1a_M_contig93.17363.1 vs. uniprot
Match: UPI001684A996 (HU family DNA-binding protein n=1 Tax=Pseudanabaena sp. FACHB-2040 TaxID=2692859 RepID=UPI001684A996) HSP 1 Score: 94.7 bits (234), Expect = 1.490e-22 Identity = 46/89 (51.69%), Postives = 68/89 (76.40%), Query Frame = 0 Query: 67 LRKPAVVEAIAERSNLSKNQAEAALAAFTDVVMQGVADGNKITLQGFGTFEGRARKGRTGRNPRTGEELKIKATTAPAFSASKSFKDMV 155 + K +++ +AE++N++K +A+A ++AFT+ V++ VA+G K+TL GFGTFE RAR R GRNP+TGE +KI A+T P FSA K FK+ V Sbjct: 1 MNKAELIDKVAEKANVTKKEADALISAFTESVVEAVAEGQKVTLVGFGTFEPRARAEREGRNPKTGEAMKIPASTVPVFSAGKLFKEKV 89
BLAST of mRNA_E-siliculosus-1a_M_contig93.17363.1 vs. uniprot
Match: U5DQY8_9CHRO (Bacterial nucleoid DNA-binding protein n=1 Tax=Rubidibacter lacunae KORDI 51-2 TaxID=582515 RepID=U5DQY8_9CHRO) HSP 1 Score: 94.0 bits (232), Expect = 2.990e-22 Identity = 46/89 (51.69%), Postives = 66/89 (74.16%), Query Frame = 0 Query: 67 LRKPAVVEAIAERSNLSKNQAEAALAAFTDVVMQGVADGNKITLQGFGTFEGRARKGRTGRNPRTGEELKIKATTAPAFSASKSFKDMV 155 + K +++ IAE++ ++K QA+A L A D +M+ V+DG K+TL GFG+FE R RK R GRNP+TG++++I AT PAFSA KSFK+ V Sbjct: 1 MNKGDLIDQIAEKTTVTKKQADAVLTAALDTIMEAVSDGEKVTLVGFGSFESRERKAREGRNPKTGDKMEIPATRVPAFSAGKSFKEKV 89 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig93.17363.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_E-siliculosus-1a_M_contig93.17363.1 ID=prot_E-siliculosus-1a_M_contig93.17363.1|Name=mRNA_E-siliculosus-1a_M_contig93.17363.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=156bpback to top |