prot_E-siliculosus-1a_M_contig93.17350.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig93.17350.1
Unique Nameprot_E-siliculosus-1a_M_contig93.17350.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length207
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig93.17350.1 vs. uniprot
Match: A0A6H5L3A0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3A0_9PHAE)

HSP 1 Score: 53.9 bits (128), Expect = 3.800e-6
Identity = 30/53 (56.60%), Postives = 33/53 (62.26%), Query Frame = 0 
Query:   13 RVKHPRGGYILLRKLAEIWGRPRGQGGETTRKHPTKLAETRHCPTRRIGGSQG 65
            RVKHPR G  L RK+A+ W        ET RKHPTKLA+  HC  RR GGS G
Sbjct:   49 RVKHPREGCALWRKVAQGW--------ETRRKHPTKLAD--HCRRRRTGGSLG 91
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig93.17350.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L3A0_9PHAE3.800e-656.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig93contigE-siliculosus-1a_M_contig93:332403..333023 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig93.17350.1mRNA_E-siliculosus-1a_M_contig93.17350.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig93 332385..333023 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig93.17350.1 ID=prot_E-siliculosus-1a_M_contig93.17350.1|Name=mRNA_E-siliculosus-1a_M_contig93.17350.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=207bp
MARRKLAQETGARVKHPRGGYILLRKLAEIWGRPRGQGGETTRKHPTKLA
ETRHCPTRRIGGSQGRVAVRGRRLGWVGLLVLSERLYTPYPPGTKNEKRN
TCAVTTPSIGYPGCWRKDALNTNPLLRRYMCFGDTLVGKHNKRKNDATSN
PKDVSKTLARQGKANRRSGVLFLPPSCLPHKPRLRRATRPPAVGNKHDHP
VRRVIL*
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