prot_E-siliculosus-1a_M_contig93.17348.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_M_contig93.17348.1
Unique Name	prot_E-siliculosus-1a_M_contig93.17348.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length	54

Homology

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_M_contig93.17348.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_M_contig93.17348.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 0

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x 1

POSITION

0


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29

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x 1

POSITION

0


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10		coord: 3..54 e-value: 2.3E-13 score: 51.8
None	No IPR available	PANTHER	PTHR46662	FAMILY NOT NAMED	coord: 5..54
None	No IPR available	PANTHER	PTHR46662:SF8		coord: 5..54
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 5..53

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_M_contig93	contig	E-siliculosus-1a_M_contig93:322839..327682 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_M_contig93.17348.1	mRNA_E-siliculosus-1a_M_contig93.17348.1	Ectocarpus siliculosus Ec864m_EcPH12_78m male	mRNA	E-siliculosus-1a_M_contig93 322839..327682 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_M_contig93.17348.1 ID=prot_E-siliculosus-1a_M_contig93.17348.1|Name=mRNA_E-siliculosus-1a_M_contig93.17348.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=54bp
MTLLLAGPIPRELGNLAVLQYLNLEVNELSGHIPPQLGQLGALQSLSLGG
NKLD

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR032675	LRR_dom_sf