prot_E-siliculosus-1a_M_contig92.17271.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig92.17271.1
Unique Nameprot_E-siliculosus-1a_M_contig92.17271.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length405
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig92.17271.1 vs. uniprot
Match: A0A6H5L1X1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1X1_9PHAE)

HSP 1 Score: 377 bits (967), Expect = 3.310e-123
Identity = 257/326 (78.83%), Postives = 266/326 (81.60%), Query Frame = 0 
Query:   85 NQVPFMEELMADFVDGNRGGGRSSEGGHPXXXXXXXX--GRFGEGPPGRMDSKRGGMGHHGGPRFTGREQXXXXXXXXXQRQGPRPSMFSVLVDWIRGDSSXXXXXXXXXXXXXXXXXXX-DDWDGSVTVGG---PSFGGDPVPEPLLLEKAVAREPMMMGERDSGIFHGPSHPHGPPPHPHGYGLLPGAPLERGPDGGRDHIRSRNRLPEDLENRGRAWLEDSLDGEDIGPVEGILAFFFFIGTCTLLLLPFFLLGRALRKLVRAGAXXXXXXXXXXXXDAPDGYQALPDDATAXXXXXXXXXXXXXXXXXVTGTPVNPPPSVHL 404
            +QVPFME+LMADFV+GNRGGGRSSEGGHP          GR   GPPGRMD++RG MGHHGGPRFTG EQ         QRQGPRPSMFSVLVDWI GDSSXXXXXXXXXXXXXXXXXXX DDW    TV G     FGGD V E L L +A+AREPMMM ERDSG+FHGPSHP G PP PH Y  LPG P+E GPDGGRDHIRSRNRLPEDLE RGRAWLEDSLDGEDIGPVEGILAFFFFIGTCTLLLLPFFLLGRALRKLVRAGA XXXXXX     DAPDGYQALPDDAT  XXXXXXXXXXXXXXX VTGTPVNPPPSVHL
Sbjct:  239 DQVPFMEKLMADFVNGNRGGGRSSEGGHPGHPDHHHNPHGRVWGGPPGRMDTRRGDMGHHGGPRFTGGEQHPGPKHHGQQRQGPRPSMFSVLVDWIMGDSSXXXXXXXXXXXXXXXXXXXXDDWGVLGTVDGYVGVPFGGDAVSE-LHLGQAIAREPMMMAERDSGLFHGPSHPPGMPPPPHAYEPLPGTPMEGGPDGGRDHIRSRNRLPEDLETRGRAWLEDSLDGEDIGPVEGILAFFFFIGTCTLLLLPFFLLGRALRKLVRAGAGXXXXXXSG---DAPDGYQALPDDATTAXXXXXXXXXXXXXXX-VTGTPVNPPPSVHL 559
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BLAST of mRNA_E-siliculosus-1a_M_contig92.17271.1 vs. uniprot
Match: D7FKY4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKY4_ECTSI)

HSP 1 Score: 341 bits (875), Expect = 2.920e-113
Identity = 233/278 (83.81%), Postives = 238/278 (85.61%), Query Frame = 0 
Query:  132 MDSKRGGMGHHGGPRFTGREQXXXXXXXXXQRQGPRPSMFSVLVDWIRGDSSXXXXXXXXXXXXXXXXXXXDDWDGSV--TVGGPSFGGDPVPEPLLLEKAVAREPMMMGERDSGIFHGPSHPH--GPPPHPHGYGLLPGAPLERGPDGGRDHIRSRNRLPEDLENRGRAWLEDSLDGEDIGPVEGILAFFFFIGTCTLLLLPFFLLGRALRKLVRAGAXXXXXXXXXXXX-DAPDGYQALPDDATAXXXXXXXXXXXXXXXXXVTGTPVNPPPSVHL 404
            MDSKRGGM HHGGPRFTG EQ         QRQGPRPSMFSVLVDWI GDSSXXXXXXXXXXXXXXXXXXX    G V  TV GP FGG PV EP L+EKA+ REPMM+G+RDSG+FH PSHPH  GP    HG G LPGAPLERGPDGGRDHIRSRNRLPEDLENRGRAWLEDSLDGEDIGPVEGILAFFFFIGTCTLLLLPFFLLGRALRKLVRAGAXXXXXXXXXXXX DAPDGYQALPDDATA    XXXXXXXXXXXX VTGTPVNPPPSVHL
Sbjct:    1 MDSKRGGMVHHGGPRFTGGEQHPGPRHHGQQRQGPRPSMFSVLVDWIMGDSSXXXXXXXXXXXXXXXXXXXXXXXGDVLITVDGPFFGGGPVTEPFLVEKAIVREPMMVGKRDSGLFHDPSHPHPHGPXXXXHGLGPLPGAPLERGPDGGRDHIRSRNRLPEDLENRGRAWLEDSLDGEDIGPVEGILAFFFFIGTCTLLLLPFFLLGRALRKLVRAGAXXXXXXXXXXXXXDAPDGYQALPDDATAAVPAXXXXXXXXXXXXVVTGTPVNPPPSVHL 278
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig92.17271.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L1X1_9PHAE3.310e-12378.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKY4_ECTSI2.920e-11383.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 314..334
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..313
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 335..404
NoneNo IPR availableTMHMMTMhelixcoord: 313..335

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig92contigE-siliculosus-1a_M_contig92:240646..242048 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig92.17271.1mRNA_E-siliculosus-1a_M_contig92.17271.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig92 240646..242048 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig92.17271.1 ID=prot_E-siliculosus-1a_M_contig92.17271.1|Name=mRNA_E-siliculosus-1a_M_contig92.17271.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=405bp
GRTCLPRQRGNSWPKTRGAPRTRSKRSRARLRGPRPTSRLRGPRPTSTTS
FSRRRRSPETAPRAAATRSQRRAWKSARRSDRPTNQVPFMEELMADFVDG
NRGGGRSSEGGHPGHPHHHHHGRFGEGPPGRMDSKRGGMGHHGGPRFTGR
EQHPGPRHHGQQRQGPRPSMFSVLVDWIRGDSSSSDSNDEESSSSSSSDS
SSDDWDGSVTVGGPSFGGDPVPEPLLLEKAVAREPMMMGERDSGIFHGPS
HPHGPPPHPHGYGLLPGAPLERGPDGGRDHIRSRNRLPEDLENRGRAWLE
DSLDGEDIGPVEGILAFFFFIGTCTLLLLPFFLLGRALRKLVRAGAGGGG
SGSGSGGGDAPDGYQALPDDATAAVAAAGRRGDDDDDNVVVTGTPVNPPP
SVHL*
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