prot_E-siliculosus-1a_M_contig91.17232.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig91.17232.1
Unique Nameprot_E-siliculosus-1a_M_contig91.17232.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length591
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig91.17232.1 vs. uniprot
Match: A0A6H5KZJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZJ8_9PHAE)

HSP 1 Score: 880 bits (2274), Expect = 0.000e+0
Identity = 492/599 (82.14%), Postives = 502/599 (83.81%), Query Frame = 0
Query:    3 MPTSVECSRPTATATXXXXXXXXXXXXXXXXXXXXXFSVSLEQQAVPAPPPSSAVCPARADPGTLTAPAGRRVAAALAPVTTTTPPASGDRVSAAFGGRRSSPSFRSAGCRRPQHDRTAGAAAAVAAAAGVLRRAATSFAXXXXXXXXXXXXXXXXXGALVTESQCEVATLRGTEAELGDSPRLDTSTEAAAAGVDQAIVATNATYDRMVLDQLQITFLEEGRDVKFRNLWSDHVWKNTARMTFPGAEVLVLLEEGSPPEFICMNEHYGLSFEKGEAGETYADGELTSDKVLNWSLLGADYLALAGVTSFTPTEASALPSTTFLVAAREPVVSEELTPDFHYFLSEPAEDMDPSACPEPCSEQVVTYYWSSTAGTVYQLDMADVSAEPPPCWLGLFQAVADGPPAEGVDPAVWEATLTCTAGLLQAVEDSMVSGVSASSSGGXXXXXXXXXXXXXXXVLVPALLVSFVLLAFGFFRHQKGRWLRKIRATDEAWGEGLDGNGKGKAPRPPTGKFKLGIDGGVS-----------AGADRLKASHAPQRVFTDVSIDEGEAPPGGMAVATAERKQQQAVGVVVVDEELGGNEGGEDMVYPM 590
            MPTSV+C RPT  A                 XXX  FSVSLEQ AVPAPPPSSA C A ADPGTL A AGR   AA A VTTT  PA+GDRVSAAF GRRSS SFRSAGCRRPQH RTAGAAAA+AAA GVL RAATSFA                 GALVTESQCEVATLRGTEAELGDSPRLDTSTEAAAAGVDQAIVATNATYDRMVLDQL+ITFLEEGRDVKFRNLWSDHVWKNTARMTFPGA+VLV LEEGSPPEFICMNEHYGLSFEKGEAGETYADGELTSDKVLNWSLLGADYLALAGVTSFTPTEAS LPSTTFLVAAREPVVSEELTPDFHYFL+EPAEDMDPSACPEPCSEQVVTYYWSSTAGTVYQLDMADV+AEPPPCWL LFQAVADGPPAEGVDPAVWEATLTCTAGLLQAVEDSM SG   + + G               VLVPALLVSFVLLAFGFFRHQKGRWLRKIRATDEAWGEGLDGNGKGKAPRPPTGKFKLGIDGGV+           AGADRLKASHAPQRV TDVSIDEGEAP GGMAV TA RKQQQ VGVVVVDEELGGNEGGEDMVYPM
Sbjct:    1 MPTSVKCPRPTTAA----GEGGSACNINKKRXXXRCFSVSLEQ-AVPAPPPSSAACRAHADPGTLAAAAGR--VAAPASVTTTMLPANGDRVSAAFWGRRSS-SFRSAGCRRPQHHRTAGAAAALAAAVGVLGRAATSFAAVSVLAVAVTSAPVSV-GALVTESQCEVATLRGTEAELGDSPRLDTSTEAAAAGVDQAIVATNATYDRMVLDQLRITFLEEGRDVKFRNLWSDHVWKNTARMTFPGADVLVHLEEGSPPEFICMNEHYGLSFEKGEAGETYADGELTSDKVLNWSLLGADYLALAGVTSFTPTEASTLPSTTFLVAAREPVVSEELTPDFHYFLAEPAEDMDPSACPEPCSEQVVTYYWSSTAGTVYQLDMADVAAEPPPCWLDLFQAVADGPPAEGVDPAVWEATLTCTAGLLQAVEDSMASGGGTAVAAGRAA------------VLVPALLVSFVLLAFGFFRHQKGRWLRKIRATDEAWGEGLDGNGKGKAPRPPTGKFKLGIDGGVAVAASRAPAAVAAGADRLKASHAPQRVLTDVSIDEGEAPTGGMAV-TAGRKQQQVVGVVVVDEELGGNEGGEDMVYPM 577          
BLAST of mRNA_E-siliculosus-1a_M_contig91.17232.1 vs. uniprot
Match: D8LJR6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJR6_ECTSI)

HSP 1 Score: 817 bits (2110), Expect = 1.440e-293
Identity = 493/602 (81.89%), Postives = 505/602 (83.89%), Query Frame = 0
Query:    1 MAMPTSVECSRPTATATXXXXXXXXXXXXXXXXXXXXX-FSVSLEQQAVPAPPPSSAVCPARADPGTLTAPAGRRVAAALAPVTTTTPPASGDRVSAAFGGRRSSPSFRSAGCRRPQHDRTAGAAAAVAAAAGVLRRAATSFAXXXXXXXXXXXXXXXXXGALVTESQCEVATLRGTEAELGDSPRLDTSTEAAAAGVDQAIVATNATYDRMVLDQLQITFLEEGRDVKFRNLWSDHVWKNTARMTFPGAEVLVLLEEGSPPEFICMNEHYGLSFEKGEAGETYADGELTSDKVLNWSLLGADYLALAGVTSFTPTEASALPSTTFLVAAREPVVSEELTPDFHYFLSEPAEDMDPSACPEPCSEQVVTYYWSSTAGTVYQLDMADVSAEPPPCWLGLFQAVADGPPAEGVDPAVWEATLTCTAGLLQAVEDSMVSGVSASSSGGXXXXXXXXXXXXXXXVLVPALLVSFVLLAFGFFRHQKGRWLRKIRATDEAWGEGLDGNGKGKAPRPPTGKFKLGIDGGVS-----------AGADRLKASHAPQRVFTDVSIDEGEAPPGGMAVATAERKQQQAVGVVVVDEELGGNEGGEDMVYPM 590
            MAMPTSVECSRPT    XXXXXXXXXXXXXXXXXXXXX FSVSLEQQAVPAPPPSSAV PA ADPGTL A AGR   AA APVT   PPASGDRVS AFGGRRSS SFRSAGCRRPQHD TAGAAAA+AAAAGVL R      XXXXXXXXXXXXXXXXXGALVT+SQC+VATLRGTEA+LGDSPRLDTSTEAAAAGVDQAIVATNATYDRMVLDQLQIT LEEGRDVKFRNLWSDHVWKNTARMTFPGA+VLVLLEEGSP EFICMNEHYGLSFEKGEAGETYADGELTSDKVLNWSLLGADYLAL GV+SFTPTEAS LPSTTFL AAREP VSEELTPDFHYFL+EPAEDMDPSACPEPCSEQVVTYYWSSTAGTVYQLDMADVSAEPPPCWLGLFQAVADGPPAEGVDPAVWEAT+TCTAGLLQAVE+SM                                               KGRWLRKIR TDEAWGE LDGNGKGKAPRPPTGKFKLGIDGGV+           AGADRLKASHAPQRVFTDVSIDEGEAP GGMA AT ERKQQ+ VG+V VDEELGGNEGGEDMVYPM
Sbjct:    1 MAMPTSVECSRPTTXXXXXXXXXXXXXXXXXXXXXXXXCFSVSLEQQAVPAPPPSSAVRPAHADPGTLAAAAGR--VAAPAPVTXXXPPASGDRVSGAFGGRRSS-SFRSAGCRRPQHDHTAGAAAALAAAAGVLGRXXXXXXXXXXXXXXXXXXXXXXXGALVTDSQCKVATLRGTEADLGDSPRLDTSTEAAAAGVDQAIVATNATYDRMVLDQLQITILEEGRDVKFRNLWSDHVWKNTARMTFPGADVLVLLEEGSPAEFICMNEHYGLSFEKGEAGETYADGELTSDKVLNWSLLGADYLALDGVSSFTPTEASTLPSTTFLAAAREPDVSEELTPDFHYFLAEPAEDMDPSACPEPCSEQVVTYYWSSTAGTVYQLDMADVSAEPPPCWLGLFQAVADGPPAEGVDPAVWEATVTCTAGLLQAVEESM-----------------------------------------------KGRWLRKIRTTDEAWGEELDGNGKGKAPRPPTGKFKLGIDGGVAVAASRAPSAVAAGADRLKASHAPQRVFTDVSIDEGEAPAGGMA-ATTERKQQRVVGMVTVDEELGGNEGGEDMVYPM 551          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig91.17232.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KZJ8_9PHAE0.000e+082.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJR6_ECTSI1.440e-29381.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 478..590
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 164..454
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 141..163
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..140
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 455..477
NoneNo IPR availableTMHMMTMhelixcoord: 141..163
NoneNo IPR availableTMHMMTMhelixcoord: 455..477

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig91contigE-siliculosus-1a_M_contig91:621256..625498 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig91.17232.1mRNA_E-siliculosus-1a_M_contig91.17232.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig91 620716..629823 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig91.17232.1 ID=prot_E-siliculosus-1a_M_contig91.17232.1|Name=mRNA_E-siliculosus-1a_M_contig91.17232.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=591bp
MAMPTSVECSRPTATATAADEGGSASCNMNKKRRRRRCFSVSLEQQAVPA
PPPSSAVCPARADPGTLTAPAGRRVAAALAPVTTTTPPASGDRVSAAFGG
RRSSPSFRSAGCRRPQHDRTAGAAAAVAAAAGVLRRAATSFAAVGVLAAA
AVAFAPVGVGALVTESQCEVATLRGTEAELGDSPRLDTSTEAAAAGVDQA
IVATNATYDRMVLDQLQITFLEEGRDVKFRNLWSDHVWKNTARMTFPGAE
VLVLLEEGSPPEFICMNEHYGLSFEKGEAGETYADGELTSDKVLNWSLLG
ADYLALAGVTSFTPTEASALPSTTFLVAAREPVVSEELTPDFHYFLSEPA
EDMDPSACPEPCSEQVVTYYWSSTAGTVYQLDMADVSAEPPPCWLGLFQA
VADGPPAEGVDPAVWEATLTCTAGLLQAVEDSMVSGVSASSSGGTGSGSG
GSGTAVAAAVLVPALLVSFVLLAFGFFRHQKGRWLRKIRATDEAWGEGLD
GNGKGKAPRPPTGKFKLGIDGGVSAGADRLKASHAPQRVFTDVSIDEGEA
PPGGMAVATAERKQQQAVGVVVVDEELGGNEGGEDMVYPM*
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