prot_E-siliculosus-1a_M_contig90.17141.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig90.17141.1
Unique Nameprot_E-siliculosus-1a_M_contig90.17141.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length204
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig90.17141.1 vs. uniprot
Match: D8LKK4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKK4_ECTSI)

HSP 1 Score: 352 bits (903), Expect = 6.360e-122
Identity = 202/203 (99.51%), Postives = 203/203 (100.00%), Query Frame = 0
Query:    1 MSRRRVVVKQQKPQGGGMQAAMKEMANFEDGMPTPYIPPDKNTLYVRPAEALRRMDVSKLIVIWPNNVDSTRTIKRGRRIPKASGCPSPTVEDMSQVLEFLQLWHAVEPYKAYPREPWVLGRVRVRLADEDGVPWNPEVPDRPSLMKKMGELMPNLKSRIDRISKAKKDAEALAXXXXXXXXXXXXXXXXXXXXXXGKKKGKR 203
            MSRRRVVVKQQKPQGGGMQAAMKEMANFEDGMPTPYIPPDKN+LYVRPAEALRRMDVSKLIVIWPNNVDSTRTIKRGRRIPKASGCPSPTVEDMSQVLEFLQLWHAVEPYKAYPREPWVLGRVRVRLADEDGVPWNPEVPDRPSLMKKMGELMPNLKSRIDRISKAKKDAEALAXXXXXXXXXXXXXXXXXXXXXXGKKKGKR
Sbjct:    1 MSRRRVVVKQQKPQGGGMQAAMKEMANFEDGMPTPYIPPDKNSLYVRPAEALRRMDVSKLIVIWPNNVDSTRTIKRGRRIPKASGCPSPTVEDMSQVLEFLQLWHAVEPYKAYPREPWVLGRVRVRLADEDGVPWNPEVPDRPSLMKKMGELMPNLKSRIDRISKAKKDAEALAXXXXXXXXXXXXXXXXXXXXXXGKKKGKR 203          
BLAST of mRNA_E-siliculosus-1a_M_contig90.17141.1 vs. uniprot
Match: A0A836CKP4_9STRA (Signal recognition particle, SRP19 subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKP4_9STRA)

HSP 1 Score: 136 bits (343), Expect = 3.020e-37
Identity = 68/152 (44.74%), Postives = 99/152 (65.13%), Query Frame = 0
Query:   18 MQAAMKEMANFEDGMPTPYIPPDKNTLYVRPAEALRRMDVSKLIVIWPNNVDSTRTIKRGRRIPKASGCPSPTVEDMSQVLEFLQLWHAVEPYKAYPREPWVLGRVRVRLADEDGVPWNPEVPDRPSLMKKMGELMPNLKSRIDRISKAKKD 169
            M A MK M + +  +P P   PDK   Y+ P + +  +D SK IV+WPN +D  +TI +GRR+ K   C  P V ++  + +   LW+A+EP+K YPREP+VLGRVRVR+   DG P +P++PD+ +L+KKMG L+PNL  R DR+ +  K+
Sbjct:    1 MAALMKSMEDEQQELPPP---PDKTLSYLWPDD-MGEVDASKWIVVWPNYIDKAKTIAQGRRVAKEFACDIPIVIELGAICQAFNLWYALEPFKGYPREPYVLGRVRVRVTMPDGTPAHPDIPDKVALLKKMGTLIPNLHIRKDRLLQMSKE 148          
BLAST of mRNA_E-siliculosus-1a_M_contig90.17141.1 vs. uniprot
Match: A0A7S2B120_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B120_9STRA)

HSP 1 Score: 122 bits (307), Expect = 1.360e-31
Identity = 67/151 (44.37%), Postives = 96/151 (63.58%), Query Frame = 0
Query:   19 QAAMKEMANFEDGMPTPYIPPDKNTLYVRPAEALRRMDVSKLIVIWPNNVDSTRTIKRGRRIPKASGCPSPTVEDMSQVLEFLQLWHAVEPYKAYPREPWVLGRVRVRLADEDGVPWNPEVPDRPSLMKKMGELMPNLKSRIDRISKAKKD 169
            QAA+ E+   E+   T  +P + NT    P     ++D +K I +WP+N++S RT+ +GRR+P +  C  P V +MS+VL+F +L H +EPYK YPR+    GRV+V+L DED  P + EVP R  LM KMGEL+P LK R  R+  AK++
Sbjct:   18 QAAVAEIPPGEEMYYTREMP-NPNTKISWPPSMAGKLDDAKFICVWPSNINSKRTLAKGRRVPISHSCEDPIVAEMSEVLQFYKLNHVIEPYKCYPRDWTYPGRVKVKLFDEDDQPCSEEVPSRRVLMMKMGELIPKLKIRNKRMEMAKRN 167          
BLAST of mRNA_E-siliculosus-1a_M_contig90.17141.1 vs. uniprot
Match: A0A6V2W292_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2W292_HETAK)

HSP 1 Score: 121 bits (303), Expect = 2.510e-30
Identity = 59/124 (47.58%), Postives = 83/124 (66.94%), Query Frame = 0
Query:   40 DKNTLYVRPAEALRRMDVSKLIVIWPNNVDSTRTIKRGRRIPKASGCPSPTVEDMSQVLEFLQLWHAVEPYKAYPREPWVLGRVRVRLADEDGVPWNPEVPDRPSLMKKMGELMPNLKSRIDRI 163
            DKN  +  P    ++ D S+ I +WPNN++S +T+K+GRRI K   C  P VEDMS+V ++LQL H  +PYK YPR+    GR+ VRL  EDG P+NP+VP R +L+ +MG L+P L +R  R+
Sbjct:   93 DKNASFYWPYN--QQSDYSRFITLWPNNLNSKKTVKQGRRIGKEQACEDPIVEDMSEVCQYLQLHHVKQPYKGYPRDWLCQGRLLVRLTREDGTPYNPKVPTRRALLVEMGRLIPKLSNRQRRL 214          
BLAST of mRNA_E-siliculosus-1a_M_contig90.17141.1 vs. uniprot
Match: A0A7S2SLH7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SLH7_9STRA)

HSP 1 Score: 116 bits (290), Expect = 4.610e-29
Identity = 70/164 (42.68%), Postives = 96/164 (58.54%), Query Frame = 0
Query:    1 MSRRRVVVKQQKPQGGGMQAAMKEMANFEDGMPTPYIPPDKNTLYVRPAEALRRMDVSKLIVIWPNNVDSTRTIKRGRRIPKASGCPSPTVEDMSQVLEFLQLWHAVEPYKAYPREPWVLGRVRVRLADEDGVPWNPEVPDRPSLMKKMGELMPNLKSRIDRIS 164
            MS +R   K +K     + AA   +   E+   TP + PD NT    P     ++D S+ +VIW  N++ +  +  GRRIP AS C  P V +MS+VL+  +L H +EP+K YPR   V GRVRV+L D++  P NPEVP R  LM +MGEL+P LK R  RI+
Sbjct:    1 MSSKRGKNKAKKAAQAQLAAAQNAIPPGEEIYHTP-VAPDPNTKITWPQSLAGKIDDSRFLVIWTININRSFKLSEGRRIPIASACEDPIVAEMSEVLQHFKLTHVIEPFKVYPRV-MVPGRVRVKLIDDEDQPCNPEVPTRRVLMMRMGELIPKLKIRSQRIA 162          
BLAST of mRNA_E-siliculosus-1a_M_contig90.17141.1 vs. uniprot
Match: A0A1V9ZNX3_9STRA (Transmembrane protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZNX3_9STRA)

HSP 1 Score: 108 bits (269), Expect = 4.440e-25
Identity = 56/119 (47.06%), Postives = 76/119 (63.87%), Query Frame = 0
Query:   56 DVSKLIVIWPNNVDSTRTIKRGRRIPKASGCPSPTVEDMSQVLEFLQLWHAVEPYKAYPREPWVLGRVRVRLADEDGVPWNPEVPDRPSLMKKMGELMPNLKSRIDRISKAKKDAEALA 174
            D  +    +PN +DS +T   GRRIPKA  C  P VE+M++V  + +L H +EP+KAY RE  V GRVRV+L D +G P N +V  R  LM KMGEL+P L+ R DR+ +  + A+A A
Sbjct:  142 DFKRWATFYPNYIDSDKTNAMGRRIPKAMACDRPIVEEMAEVCRYFKLDHVIEPHKAYSRESLVAGRVRVKLTDANGKPCNSDVRTRKELMLKMGELIPKLQLRKDRLQRELEAAKAPA 260          
BLAST of mRNA_E-siliculosus-1a_M_contig90.17141.1 vs. uniprot
Match: A0A067CX32_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CX32_SAPPC)

HSP 1 Score: 105 bits (261), Expect = 8.360e-24
Identity = 55/117 (47.01%), Postives = 76/117 (64.96%), Query Frame = 0
Query:   56 DVSKLIVIWPNNVDSTRTIKRGRRIPKASGCPSPTVEDMSQVLEFLQLWHAVEPYKAYPREPWVLGRVRVRLADEDGVPWNPEVPDRPSLMKKMGELMPNLKSRIDRISKAKKDAEA 172
            D S+    +PN +DS +T   GRRIPKA  C  P VE+M++V  + +L H  EPYKAY R+  V GRVRV+L D +G P + E+  R  LM KMGEL+P L+ R DR+++  + A+A
Sbjct:  155 DFSRWATFYPNYIDSGKTNADGRRIPKAMACDRPIVEEMAEVCRYFKLDHVTEPYKAYSRDFLVPGRVRVKLVDANGSPVHAEIRTRKDLMLKMGELIPKLQLRKDRLARELEAAKA 271          
BLAST of mRNA_E-siliculosus-1a_M_contig90.17141.1 vs. uniprot
Match: A0A485LD43_9STRA (Aste57867_19608 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LD43_9STRA)

HSP 1 Score: 103 bits (257), Expect = 3.430e-23
Identity = 54/118 (45.76%), Postives = 75/118 (63.56%), Query Frame = 0
Query:   55 MDVSKLIVIWPNNVDSTRTIKRGRRIPKASGCPSPTVEDMSQVLEFLQLWHAVEPYKAYPREPWVLGRVRVRLADEDGVPWNPEVPDRPSLMKKMGELMPNLKSRIDRISKAKKDAEA 172
            +D S+    +PN +DST+T   GRRIPK   C  P VE+M +V  + QL + VEPYK Y R+  + GRVRV+L D+     + E+  R  LM KMGEL+P L+SR DR++K  + A+A
Sbjct:  158 VDFSRWATFYPNYIDSTKTNAEGRRIPKGFSCEKPLVEEMGEVCRYFQLSYVVEPYKRYARDAIIQGRVRVKLVDDGKSFTHGEIRTRKDLMLKMGELIPKLQSRQDRLAKELEAAKA 275          
BLAST of mRNA_E-siliculosus-1a_M_contig90.17141.1 vs. uniprot
Match: K3WLI1_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WLI1_GLOUD)

HSP 1 Score: 102 bits (254), Expect = 5.400e-23
Identity = 56/137 (40.88%), Postives = 81/137 (59.12%), Query Frame = 0
Query:   35 PYIPPDKNTLYVRPAEALRRMDVSKLIVIWPNNVDSTRTIKRGRRIPKASGCPSPTVEDMSQVLEFLQLWHAVEPYKAYPREPWVLGRVRVRLADEDGVPWNPEVPDRPSLMKKMGELMPNLKSRIDRISKAKKDAE 171
            P +P     LY  P       +V K   ++PN ++S +T++ GRRI K + C  P  ++MS+V  +L++ HA+EP K YPR+  V GR+RVRL   DG   NPE+  R  LM KM EL+P L+SR  R+ K   +A+
Sbjct:  107 PMVPQRPKILY--PYGLAEGANVEKFYTLYPNYINSKKTVQEGRRITKEAACEDPIADEMSEVCVYLKIPHALEPSKKYPRDWMVSGRIRVRLERPDGSFENPEIKSRKDLMVKMAELIPKLQSRKVRLEKEAAEAK 241          
BLAST of mRNA_E-siliculosus-1a_M_contig90.17141.1 vs. uniprot
Match: A0A7S1F0G9_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1F0G9_NOCSC)

HSP 1 Score: 97.8 bits (242), Expect = 2.150e-22
Identity = 49/107 (45.79%), Postives = 72/107 (67.29%), Query Frame = 0
Query:   55 MDVSKLIVIWPNNVDSTRTIKRGRRIPKASGCPSPTVEDMSQVLEFLQLWHAVEPYKAYPREPWVLGRVRVRLADEDGVPWNPEVPDRPSLMKKMGELMPNLKSRID 161
            MD +K  +++PN ++S +TI  GRRI  A    +P   +M+++ EFLQ+ H +E  KAYPR+  + GR+RV L   DGV  + E+ D+  LMKKMGEL+P LKSR++
Sbjct:    7 MDYTKWNILYPNYINSKKTIPEGRRIGVADAVENPQPLEMAEICEFLQIPHRLEMNKAYPRDWMIRGRIRVLLKTPDGVHTHSEIHDKKQLMKKMGELIPKLKSRVN 113          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig90.17141.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKK4_ECTSI6.360e-12299.51Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CKP4_9STRA3.020e-3744.74Signal recognition particle, SRP19 subunit n=1 Tax... [more]
A0A7S2B120_9STRA1.360e-3144.37Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6V2W292_HETAK2.510e-3047.58Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2SLH7_9STRA4.610e-2942.68Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A1V9ZNX3_9STRA4.440e-2547.06Transmembrane protein n=1 Tax=Achlya hypogyna TaxI... [more]
A0A067CX32_SAPPC8.360e-2447.01Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A485LD43_9STRA3.430e-2345.76Aste57867_19608 protein n=1 Tax=Aphanomyces stella... [more]
K3WLI1_GLOUD5.400e-2340.88Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A7S1F0G9_NOCSC2.150e-2245.79Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 160..180
NoneNo IPR availablePANTHERPTHR17453:SF0SIGNAL RECOGNITION PARTICLE 19 KDA PROTEINcoord: 14..201
IPR002778Signal recognition particle, SRP19 subunitPFAMPF01922SRP19coord: 62..154
e-value: 1.1E-22
score: 80.7
IPR002778Signal recognition particle, SRP19 subunitPANTHERPTHR17453SIGNAL RECOGNITION PARTICLE 19 KD PROTEINcoord: 14..201
IPR036521Signal recognition particle, subunit SRP19-like superfamilyGENE3D3.30.56.30coord: 46..169
e-value: 7.5E-31
score: 108.9
IPR036521Signal recognition particle, subunit SRP19-like superfamilySUPERFAMILY69695SRP19coord: 53..158

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig90contigE-siliculosus-1a_M_contig90:317292..322967 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig90.17141.1mRNA_E-siliculosus-1a_M_contig90.17141.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig90 316808..322967 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig90.17141.1 ID=prot_E-siliculosus-1a_M_contig90.17141.1|Name=mRNA_E-siliculosus-1a_M_contig90.17141.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=204bp
MSRRRVVVKQQKPQGGGMQAAMKEMANFEDGMPTPYIPPDKNTLYVRPAE
ALRRMDVSKLIVIWPNNVDSTRTIKRGRRIPKASGCPSPTVEDMSQVLEF
LQLWHAVEPYKAYPREPWVLGRVRVRLADEDGVPWNPEVPDRPSLMKKMG
ELMPNLKSRIDRISKAKKDAEALARAEKEKAAAAVAAASQSNMKKKGKKK
GKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036521SRP19-like_sf
IPR002778Signal_recog_particle_SRP19