prot_E-siliculosus-1a_M_contig90.17128.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_M_contig90.17128.1
Unique Name	prot_E-siliculosus-1a_M_contig90.17128.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length	582

Homology

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BLAST of mRNA_E-siliculosus-1a_M_contig90.17128.1 vs. uniprot
Match: D8LKJ2_ECTSI (F-box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKJ2_ECTSI)

HSP 1 Score: 920 bits (2379), Expect = 0.000e+0
Identity = 504/581 (86.75%), Postives = 516/581 (88.81%), Query Frame = 0

Query:    1 MDALYESQHLVKQLGVIFRNIVYPASTPLLPLYSDRPVATAQPSSSPGHLFHQRRXXXXXXXXXXQALDSSTSDHPPCGSRVQPLSITTKISERLVSLSNIVCQKSEPLLPLHSSTPSHPCPTFSPFPTATSTPVFFRSPCVHHRELAQRQQERHPLFDRPFPLDRLPDDVLPSVLAFLPARELSGMRRASQRFLQEVDHHGDALWGSLCRCDFPSIAS-PTAAAAVGEDKHAYLSHHHQQYVSNLMHRANDQVLNLRSNRHLRKRLYNYTWGNKDPQKSSRTINMTSGRGDTASVSGRIGRTSGSFPGGSNXXXXXXGSGAVIGLLSDLVTVPDPRIARALSFKCRFVLSRVVVVNDNVSSSIRRSGLYTERVEFLSLSAFRQENPSVLPRPPPTGSNDTAXXXXXXXXXXXXXXXXXGCREEVEAGANLLPLAPETPAPAGFLGYAVRLLQLRPGHESLRWTVLLAVFKNLAVFETSEQAEVVRARMPNQRLFYCALDRPGGQGHPSPAALRVFPHISHWGFQQAPVRVGGXXXXXXXXHVVGSTSFGEEDVDDAVERQERIACLARSSLEALKCGRQM 580
            MD LYESQHLVKQLGV+FRNIVYPASTPLLPLYSDRPVATAQPSSSPGHLFHQR XXXXXXXXXX AL SS SDHPPCGSR+QPLSITTKIS+RLVSLSNIVCQKSEPLLPL SSTPSHPC TFS FP AT+TPVFFRSP  HH EL QRQQERHPLFDRPFPLD+LP+DVLPSVLAFLPARELSGMRRASQRFLQEVDHHGDALW SLCRC+FPS+AS PTAAA V EDKH+YLSHHHQQYVSN+MHRANDQVLNLRSNRHLRKRLYNYTWGNKDPQKSSRTINMTSGRG                     XXXXXX   AVIGLLSDLVTVPDPRIARALSFKCRFVLSRVVVVNDNVSSSIRRSGLYTERVEFLSLSA RQE+PSVLPRPPPT SNDTA                 GCREEVEAGANLLPLAPETPAPAGFLGYAVRLLQLRPGHESLRWTVLLAVFK+LAVFETSEQAEVVRARM NQRLFYCALDRP GQGHPSPAALRV PHISHWGFQQAP RVGGXXXXXXXXHVVGSTSFGEEDVDDAVERQERIACLA SSLEALKCGRQM
Sbjct:    1 MDVLYESQHLVKQLGVLFRNIVYPASTPLLPLYSDRPVATAQPSSSPGHLFHQRXXXXXXXXXXXXALHSSMSDHPPCGSRIQPLSITTKISDRLVSLSNIVCQKSEPLLPLQSSTPSHPCSTFSSFPAATATPVFFRSPYAHHPELVQRQQERHPLFDRPFPLDQLPEDVLPSVLAFLPARELSGMRRASQRFLQEVDHHGDALWRSLCRCEFPSMASSPTAAAGVREDKHSYLSHHHQQYVSNVMHRANDQVLNLRSNRHLRKRLYNYTWGNKDPQKSSRTINMTSGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVIGLLSDLVTVPDPRIARALSFKCRFVLSRVVVVNDNVSSSIRRSGLYTERVEFLSLSALRQESPSVLPRPPPTVSNDTAAVATASRSGGRRTDNGGGCREEVEAGANLLPLAPETPAPAGFLGYAVRLLQLRPGHESLRWTVLLAVFKDLAVFETSEQAEVVRARMANQRLFYCALDRPRGQGHPSPAALRVLPHISHWGFQQAPGRVGGXXXXXXXXHVVGSTSFGEEDVDDAVERQERIACLASSSLEALKCGRQM 581

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BLAST of mRNA_E-siliculosus-1a_M_contig90.17128.1 vs. uniprot
Match: A0A6H5KC80_9PHAE (F-box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC80_9PHAE)

HSP 1 Score: 463 bits (1192), Expect = 9.660e-158
Identity = 258/326 (79.14%), Postives = 274/326 (84.05%), Query Frame = 0

Query:    1 MDALYESQHLVKQLGVIFRNIVYPASTPLLPLYSDRPVATAQPSSSPGHLFHQRRXXXXXXXXXXQALDSSTSDHPPCGSRVQPLSITTKISERLVSLSNIVCQKSEPLLPLHSSTPSHPCPTFSPFPTATSTPVFFRSPCVHHRELAQRQQERHPLFDRPFPLDRLPDDVLPSVLAFLPARELSGMRRASQRFLQEVDHHGDALWGSLCRCDFPSIAS-PTAAAAV----------GEDKHAYLSHHHQQYVSNLM----HRANDQVLNLRSNRHLRKRLYNYTWGNKDPQKSSRTINMTSGRGDTASVSGRIGRTSGSFPGGSN 311
            M+ LY+ QHLVKQLGV+FRNIVYPAST LLP YSDRPVA AQPSSSPGHLFHQR XXXXXXXXXX ALDSS SDHPPCGSRVQPLSI TKISERLVSLSNIVCQKS+PLLPLHSSTPSHPCPTFSPFP  T+TPVFF SP  HHREL QRQ+ER+PLFDRPFPLDRLP+DVLPSVLAFLPA ELSGMRR SQ FLQEVDHHG+ALW SLCRCDFPS+AS PTAAA V            +  A L     + ++ +     HRANDQVLNLRSNRHLRKRLYNYTWGNKDPQ+SSRTINMTSGRG TASVSGRIG TSGS PG SN
Sbjct:    1 MNVLYQGQHLVKQLGVLFRNIVYPASTSLLPPYSDRPVAAAQPSSSPGHLFHQRXXXXXXXXXXXPALDSSMSDHPPCGSRVQPLSIKTKISERLVSLSNIVCQKSKPLLPLHSSTPSHPCPTFSPFPAVTATPVFFPSPYAHHRELVQRQEERYPLFDRPFPLDRLPEDVLPSVLAFLPAGELSGMRRVSQTFLQEVDHHGEALWDSLCRCDFPSMASSPTAAAGVWGYSRRPVPFAINSSARLRTTPLKSLAAIRQQRHHRANDQVLNLRSNRHLRKRLYNYTWGNKDPQQSSRTINMTSGRGTTASVSGRIGSTSGSAPGWSN 326

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BLAST of mRNA_E-siliculosus-1a_M_contig90.17128.1 vs. uniprot
Match: A0A6H5L1J4_9PHAE (F-box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1J4_9PHAE)

HSP 1 Score: 338 bits (868), Expect = 5.420e-107
Identity = 221/435 (50.80%), Postives = 265/435 (60.92%), Query Frame = 0

Query:  152 QERHPLFDRPFPLDRLPDDVLPSVLAFLPARELSGMRRASQRFLQEVDHHGDALWGSLCRCDFPSIASPTAAAAVGEDKHAYLSHHHQQYVSNLMHRANDQVLNLRSNRHLRKRLYNYTWGNKDPQKSSRTINMTSGRGDTASVSGRIGRTSGSFPGGSNXXXXXXGSGAVIGLLSDLVTVPDPRIARALSFKCRFVLSRVVVVNDNVSSSIRRSGLYTERVEFLSLSAFRQENPS-----VLPR--PPPTGSNDTAXXXXXXXXXXXXXXXXXGCREEVEAGANLLPLAPETPAPAGFLGYAVRLLQLRPGHESLRWTVLLAVFKNLAVFETSEQAEVVRARMPNQRLFYCALDRPGGQGHPSPAALRVFPHISHWGFQQ--APVRVGGXXXXXXXXHVVGSTSFGEEDVDDAVERQERIACLARSSLEALKCG 577
            ++R PL+  PFPL  +P+DV  +VL+FLPA ELS +RRAS+ FL   D H D LWG L RCDFPS+A+PT  AA    +       HQQYV N+M RA D+V NLR+N  LR+ L ++TW    P+ ++ T         + ++   I  T G    G + XXXXX    VIGLLSDLVTVPDPRIARALS+K R  LS VVV ND V    RR GLYT  V FL LS    +NP+     +LP   PPP    +                     REE   GA+LLP APE+PAPAGFLGYAVRLL+LRP HE LRWT L A+F++LAVFET+EQAEVVRAR+P++RLFYCALD PG Q  P P   R  PHISHWGF    A   +GG         + G      E V DA+ERQERIAC ARSSL  L+ G
Sbjct:   67 KQRQPLWS-PFPLGLIPEDVRLTVLSFLPAGELSSIRRASRDFLHTADRHADVLWGRLNRCDFPSVAAPTDPAA----QETNCLSPHQQYVKNVMRRAIDEVGNLRANHRLRESLDSFTWPIDWPRGNATT---------SGTIYSAISNTFGGGIDGRSSXXXXXXXXXVIGLLSDLVTVPDPRIARALSYKRRAALSTVVVDNDKVLFDFRRRGLYTGPVNFLPLSTLVVDNPTPLAPLLLPLLLPPPRRIGNVPAGTEDGDG-----------REE---GADLLPRAPESPAPAGFLGYAVRLLRLRPEHEPLRWTALFALFRDLAVFETTEQAEVVRARVPDRRLFYCALDHPGAQDEPCPIGGRSMPHISHWGFHGLLADSGLGGGEG-----EMPGVRDRAGETVGDALERQERIACFARSSLAFLQYG 468

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BLAST of mRNA_E-siliculosus-1a_M_contig90.17128.1 vs. uniprot
Match: A0A6H5KB01_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB01_9PHAE)

HSP 1 Score: 283 bits (724), Expect = 9.640e-90
Identity = 142/163 (87.12%), Postives = 145/163 (88.96%), Query Frame = 0

Query:  419 GCREEVEAGANLLPLAPETPAPAGFLGYAVRLLQLRPGHESLRWTVLLAVFKNLAVFETSEQAEVVRARMPNQRLFYCALDRPGGQGHPSPAALRVFPHISHWGFQQAPVRVGGXXXXXXXXHVVGSTSFGEEDVDDAVERQERIACLARSSLEALKCGRQML 581
            G REEVEAGANLLPLAPETPAPAGFLGYAVRLLQLRPGHESLRWTVLLAVFK+LAVF+TSEQAEVVRARM NQR FYCALDRP GQGHPSPA LRV PHISHWGFQQAPVRVGG        H VGSTSFGEEDVD AV RQE+IACLARSSLEALKCGR ML
Sbjct:    8 GRREEVEAGANLLPLAPETPAPAGFLGYAVRLLQLRPGHESLRWTVLLAVFKDLAVFKTSEQAEVVRARMANQRRFYCALDRPRGQGHPSPAVLRVLPHISHWGFQQAPVRVGGGGGGRGGEHAVGSTSFGEEDVDAAVARQEKIACLARSSLEALKCGRHML 170

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BLAST of mRNA_E-siliculosus-1a_M_contig90.17128.1 vs. uniprot
Match: D8LKK0_ECTSI (F-box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKK0_ECTSI)

HSP 1 Score: 230 bits (586), Expect = 2.010e-66
Identity = 172/441 (39.00%), Postives = 200/441 (45.35%), Query Frame = 0

Query:  153 ERHPLFDRPFPLDRLPDDVLPSVLAFLPARELSGMRRASQRFLQEVDHHGDALWGSLCRCDFPSIASPTAAAAVGEDKHAYLSHHHQQYVSNLMHRANDQVLNLRSNRHLRKRLYNYTWGNKDPQKSSRTINMTSGRGDTASVSGRIGRTSGSFPGGSNXXXXXXGSGAVIGLLSDLVTVPDPRIARALSFKCRFVLSRVVVVNDNVSSSIRRSGLYTERVEFLSLSAFRQENPS-----VLPR--PP-------PTGSNDTAXXXXXXXXXXXXXXXXXGCREEVEAGANLLPLAPETPAPAGFLGYAVRLLQLRPGHESLRWTVLLAVFKNLAVFETSEQAEVVRARMPNQRLFYCALDRPGGQGHPSPAALRVFPHISHWGFQQ--APVRVGGXXXXXXXXHVVGSTSFGEEDVDDAVERQERIACLARSSLEALKCG 577
            +R PL+   FPL  +P+DV  +VL+FLPA ELS +RRAS+ FLQ  D H D LWG L RC+FPS+++PT  AA                          Q  N  S                                                                          P  R         R  LS VVV ND V    RR G YT  V FL LS    +NP+     +LP   PP       P G+ D                     REE   GANLLP APE+PAPAGFLGYAVRLL+LRP HE LRWT L A+F++LAVFET+EQAE VRAR+P++RLFYCALD PG Q  P P   R  PHISHWGF    A   +GG         V G      E V DA+ERQER AC ARSSL  L+ G
Sbjct:   67 QRQPLWSS-FPLGLIPEDVRLTVLSFLPAGELSSIRRASRDFLQTADRHADVLWGRLNRCEFPSVSAPTGPAA--------------------------QETNCLS--------------------------------------------------------------------------PHQR---------RAALSTVVVDNDKVLFDFRRRGFYTGPVNFLPLSTLVMDNPTPLAPLLLPLLLPPQRRIGIVPAGTEDGDG------------------REE---GANLLPRAPESPAPAGFLGYAVRLLRLRPEHEPLRWTALFALFRDLAVFETTEQAEAVRARVPDRRLFYCALDHPGAQDEPCPPGGRSLPHISHWGFHGVLADSGLGGGEG-----EVPGVRDRAGETVGDALERQERTACFARSSLAFLQYG 371

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BLAST of mRNA_E-siliculosus-1a_M_contig90.17128.1 vs. uniprot
Match: A0A2R5GMN1_9STRA (Uncharacterized protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GMN1_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 1.980e-5
Identity = 69/268 (25.75%), Postives = 108/268 (40.30%), Query Frame = 0

Query:  320 GAVIGLLSDLVTVPDPRIARALSFKCRFVLSRVVVVNDNVSSSIRRSGLYTERVEFLSLSAFRQENPSVLPRPPPTGSNDTAXXXXXXXXXXXXXXXXXGCREEVEAGANLLPLAPETPAPAGFLGYAVRLLQLRPGHESLRWTVLLAVFKNLAVFETSEQAEVVRAR--MPNQRLFYCALDRPGGQGHPSPAALRVFPHISHWGFQQAPVRVGGXXXXXXXXHVVGSTS--------FGEEDVDDA--VERQERIACLARSSLEALK 575
            GAV+ L+S++    D  I+ A+S   ++ +S V++   N +   R+   Y   V F S     Q+N S L  P P+                                     +A +     GFLGYAV L++L P  E +R+T LLA +KNL V+ + ++    RA   +P+  +  CA+D        +PA++   P       +  P+R  G         +  STS         G  D +DA  +ER E       S +  LK
Sbjct:  162 GAVVRLVSNIGYFDDAAISLAVSSYRQYAMSAVILSRSNDAIVFRKCTDYRGPVSFYS-----QDNISTLLTPHPS-------------------------------------IAMQPIRAPGFLGYAVNLVRLSPDEEYMRYTFLLAAYKNLTVWASEKELRAARASGALPDT-VSACAIDAF------APASIAETPEADAEARRNVPLRPSGLSASSSHSSLSTSTSNVTRPAAAIGLPDDEDAPDLERPEAPTSSPASPMTPLK 380

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_M_contig90.17128.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_M_contig90.17128.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 6


Match Name	E-value	Identity	Description
D8LKJ2_ECTSI	0.000e+0	86.75	F-box domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5KC80_9PHAE	9.660e-158	79.14	F-box domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5L1J4_9PHAE	5.420e-107	50.80	F-box domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5KB01_9PHAE	9.640e-90	87.12	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LKK0_ECTSI	2.010e-66	39.00	F-box domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A2R5GMN1_9STRA	1.980e-5	25.75	Uncharacterized protein n=1 Tax=Hondaea fermentalg...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 571..581
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 161..209 score: 12.306
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 159..220

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_M_contig90	contig	E-siliculosus-1a_M_contig90:222779..225523 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_M_contig90.17128.1	mRNA_E-siliculosus-1a_M_contig90.17128.1	Ectocarpus siliculosus Ec864m_EcPH12_78m male	mRNA	E-siliculosus-1a_M_contig90 222587..226087 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_M_contig90.17128.1 ID=prot_E-siliculosus-1a_M_contig90.17128.1|Name=mRNA_E-siliculosus-1a_M_contig90.17128.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=582bp
MDALYESQHLVKQLGVIFRNIVYPASTPLLPLYSDRPVATAQPSSSPGHL
FHQRRQQHQEEQQQRQALDSSTSDHPPCGSRVQPLSITTKISERLVSLSN
IVCQKSEPLLPLHSSTPSHPCPTFSPFPTATSTPVFFRSPCVHHRELAQR
QQERHPLFDRPFPLDRLPDDVLPSVLAFLPARELSGMRRASQRFLQEVDH
HGDALWGSLCRCDFPSIASPTAAAAVGEDKHAYLSHHHQQYVSNLMHRAN
DQVLNLRSNRHLRKRLYNYTWGNKDPQKSSRTINMTSGRGDTASVSGRIG
RTSGSFPGGSNGGNGGDGSGAVIGLLSDLVTVPDPRIARALSFKCRFVLS
RVVVVNDNVSSSIRRSGLYTERVEFLSLSAFRQENPSVLPRPPPTGSNDT
AAVATASRSGGRRTDDGGGCREEVEAGANLLPLAPETPAPAGFLGYAVRL
LQLRPGHESLRWTVLLAVFKNLAVFETSEQAEVVRARMPNQRLFYCALDR
PGGQGHPSPAALRVFPHISHWGFQQAPVRVGGGGGGRGGGHVVGSTSFGE
EDVDDAVERQERIACLARSSLEALKCGRQML*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036047	F-box-like_dom_sf
IPR001810	F-box_dom