prot_E-siliculosus-1a_M_contig90.17127.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig90.17127.1
Unique Nameprot_E-siliculosus-1a_M_contig90.17127.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length187
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig90.17127.1 vs. uniprot
Match: D8LKJ1_ECTSI (Arf2A, ARF family GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKJ1_ECTSI)

HSP 1 Score: 374 bits (960), Expect = 3.570e-131
Identity = 183/186 (98.39%), Postives = 183/186 (98.39%), Query Frame = 0
Query:    1 MGQIIARLANILNGLQEKRLLLLGLDAAGKTSLLYRLHLNEVVTTIPTIGFNVERVEYNRMMMTIWDIGGQTKLRPLWHHYFINTDALIFVVDSNDHERIEEARDELFHILQDPNMDDCQTVLIFLNKQDLPGAISPSAMRSKLGLDGAGRNPLMKRNWYMQGCCAVTGERVYDGLDWLRGALNKK 186
            MGQIIARLANILNGLQEKRLLLLGLDAAGKTSLLYRLHLNEVVTTIPTIGFNVERVEYNRMMMTIWDIGGQTKLRPLWHHYFINTDALIFVVDSNDHERIEEARDELFHILQDPNMD CQTVLI LNKQDLPGAISPSAMRSKLGLDGAGRNPLMKRNWYMQGCCAVTGE VYDGLDWLRGALNKK
Sbjct:    1 MGQIIARLANILNGLQEKRLLLLGLDAAGKTSLLYRLHLNEVVTTIPTIGFNVERVEYNRMMMTIWDIGGQTKLRPLWHHYFINTDALIFVVDSNDHERIEEARDELFHILQDPNMDGCQTVLILLNKQDLPGAISPSAMRSKLGLDGAGRNPLMKRNWYMQGCCAVTGEGVYDGLDWLRGALNKK 186          
BLAST of mRNA_E-siliculosus-1a_M_contig90.17127.1 vs. uniprot
Match: D8LKJ9_ECTSI (Arf2B, ARF family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKJ9_ECTSI)

HSP 1 Score: 278 bits (711), Expect = 4.050e-93
Identity = 128/186 (68.82%), Postives = 156/186 (83.87%), Query Frame = 0
Query:    1 MGQIIARLANILNGLQEKRLLLLGLDAAGKTSLLYRLHLNEVVTTIPTIGFNVERVEYNRMMMTIWDIGGQTKLRPLWHHYFINTDALIFVVDSNDHERIEEARDELFHILQDPNMDDCQTVLIFLNKQDLPGAISPSAMRSKLGLDGAGRNPLMKRNWYMQGCCAVTGERVYDGLDWLRGALNKK 186
            MG +++RL +IL  L+EKRLLLLGLD AGKTSLLY LHLNE V T+PT+GFN+E+VEYN M+MTIWD+GGQ KLR LW +YF++TDALIF+VDS+D  RIEEARDE+FH+L+DPNMD CQTVLI LNKQD+PGA+ P  +  ++GL+ AG NPL +RNWYMQ CCA+TGE V+ GLDWL  AL KK
Sbjct:    1 MGHVVSRLVHILGTLKEKRLLLLGLDNAGKTSLLYNLHLNEAVGTVPTVGFNMEQVEYNNMVMTIWDVGGQAKLRSLWRYYFVDTDALIFMVDSSDENRIEEARDEMFHVLRDPNMDGCQTVLIMLNKQDVPGAVGPGIVIDRMGLNSAGDNPLRERNWYMQSCCALTGEGVFYGLDWLCEALKKK 186          
BLAST of mRNA_E-siliculosus-1a_M_contig90.17127.1 vs. uniprot
Match: A1XKU1_SUBDO (ADP-ribosylation factor n=1 Tax=Suberites domuncula TaxID=55567 RepID=A1XKU1_SUBDO)

HSP 1 Score: 213 bits (543), Expect = 9.510e-68
Identity = 106/185 (57.30%), Postives = 132/185 (71.35%), Query Frame = 0
Query:    1 MGQIIARLANILNGLQEKRLLLLGLDAAGKTSLLYRLHLNEVVTTIPTIGFNVERVEYNRMMMTIWDIGGQTKLRPLWHHYFINTDALIFVVDSNDHERIEEARDELFHILQDPNMDDCQTVLIFLNKQDLPGAISPSAMRSKLGLDGAGRNPLMKRNWYMQGCCAVTGERVYDGLDWLRGALNK 185
            MG  I+ L N L G +  R+L++GLDAAGKT++LY+L L E+VTTIPTIGFNVE VEY  +  T+WD+GGQ K+RPLW HYF+NT  LIFVVDSND ERI EA+DEL  +LQ+  + D   VL+F NKQDLP A+S S ++ KLGL       L  RNWY+Q  CA  G  +Y+GLDWL   L+K
Sbjct:    1 MGLTISNLFNSLFGNKNMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFVNTQGLIFVVDSNDRERINEAKDELARMLQEDELRDA-VVLVFANKQDLPNAMSVSEIKDKLGLHN-----LTSRNWYIQTACATQGTGLYEGLDWLSQQLSK 179          
BLAST of mRNA_E-siliculosus-1a_M_contig90.17127.1 vs. uniprot
Match: M4BN95_HYAAE (ADP-ribosylation factor n=8 Tax=Oomycota TaxID=4762 RepID=M4BN95_HYAAE)

HSP 1 Score: 213 bits (543), Expect = 9.820e-68
Identity = 103/186 (55.38%), Postives = 132/186 (70.97%), Query Frame = 0
Query:    1 MGQIIARLANILNGLQEKRLLLLGLDAAGKTSLLYRLHLNEVVTTIPTIGFNVERVEYNRMMMTIWDIGGQTKLRPLWHHYFINTDALIFVVDSNDHERIEEARDELFHILQDPNMDDCQTVLIFLNKQDLPGAISPSAMRSKLGLDGAGRNPLMKRNWYMQGCCAVTGERVYDGLDWLRGALNKK 186
            MG   +R+   L G +E R+L++GLDAAGKT++LY+L L EVVTTIPTIGFNVE VEY  +  T+WD+GGQ K+RPLW HY+ NT  LIFVVDSND +R++ ARDEL  +L +  + D   +L+F NKQDLP A+S + M  KLGL G     L  R W++Q CCA TG+ +Y+GLDWL   L KK
Sbjct:    1 MGMAFSRVFERLFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRD-SVLLVFANKQDLPNAMSAAEMTDKLGLHG-----LRHRQWFIQACCATTGDGLYEGLDWLSATLQKK 180          
BLAST of mRNA_E-siliculosus-1a_M_contig90.17127.1 vs. uniprot
Match: A0A1R3GES4_COCAP (ADP-ribosylation factor n=1 Tax=Corchorus capsularis TaxID=210143 RepID=A0A1R3GES4_COCAP)

HSP 1 Score: 214 bits (544), Expect = 1.200e-67
Identity = 104/186 (55.91%), Postives = 134/186 (72.04%), Query Frame = 0
Query:    1 MGQIIARLANILNGLQEKRLLLLGLDAAGKTSLLYRLHLNEVVTTIPTIGFNVERVEYNRMMMTIWDIGGQTKLRPLWHHYFINTDALIFVVDSNDHERIEEARDELFHILQDPNMDDCQTVLIFLNKQDLPGAISPSAMRSKLGLDGAGRNPLMKRNWYMQGCCAVTGERVYDGLDWLRGALNKK 186
            MG  I+RL  +L   +E R+L++GLDAAGKT++LY+L L E+VTTIPTIGFNVE VEY  +  T+WD+GGQ K+RPLW HYF NT  LIFVVDSND ERI EARDEL  +L +  + D  T+L+F NKQDLP A++ S +  KLGL     N L +R WY+Q  CA +G+ +Y+GLDWL   ++ K
Sbjct:    1 MGMTISRLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNVSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERISEARDELHRMLSEDELRDA-TLLVFANKQDLPNALTVSEITDKLGL-----NSLRQRRWYIQATCATSGQGLYEGLDWLSSNISTK 180          
BLAST of mRNA_E-siliculosus-1a_M_contig90.17127.1 vs. uniprot
Match: K3WYT4_GLOUD (ADP-ribosylation factor n=30 Tax=Stramenopiles TaxID=33634 RepID=K3WYT4_GLOUD)

HSP 1 Score: 213 bits (542), Expect = 1.390e-67
Identity = 103/186 (55.38%), Postives = 132/186 (70.97%), Query Frame = 0
Query:    1 MGQIIARLANILNGLQEKRLLLLGLDAAGKTSLLYRLHLNEVVTTIPTIGFNVERVEYNRMMMTIWDIGGQTKLRPLWHHYFINTDALIFVVDSNDHERIEEARDELFHILQDPNMDDCQTVLIFLNKQDLPGAISPSAMRSKLGLDGAGRNPLMKRNWYMQGCCAVTGERVYDGLDWLRGALNKK 186
            MG   +R+   L G +E R+L++GLDAAGKT++LY+L L EVVTTIPTIGFNVE VEY  +  T+WD+GGQ K+RPLW HY+ NT  LIFVVDSND +R++ ARDEL  +L +  + D   +L+F NKQDLP A+S + M  KLGL G     L  R W++Q CCA TG+ +Y+GLDWL   L KK
Sbjct:    1 MGMAFSRVFERLFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRD-SILLVFANKQDLPNAMSAAEMTDKLGLHG-----LRHRQWFIQACCATTGDGLYEGLDWLSATLQKK 180          
BLAST of mRNA_E-siliculosus-1a_M_contig90.17127.1 vs. uniprot
Match: UPI001929E330 (ADP-ribosylation factor 1-like n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI001929E330)

HSP 1 Score: 212 bits (539), Expect = 3.980e-67
Identity = 103/185 (55.68%), Postives = 133/185 (71.89%), Query Frame = 0
Query:    1 MGQIIARLANILNGLQEKRLLLLGLDAAGKTSLLYRLHLNEVVTTIPTIGFNVERVEYNRMMMTIWDIGGQTKLRPLWHHYFINTDALIFVVDSNDHERIEEARDELFHILQDPNMDDCQTVLIFLNKQDLPGAISPSAMRSKLGLDGAGRNPLMKRNWYMQGCCAVTGERVYDGLDWLRGALNK 185
            MG  I+ L  +L   +E R+L++GLDAAGKT++LY+L L EV+TTIPTIGFNVE VEY  +  T+WD+GGQ K+RPLW HYF NT  LIFV+DSND ERI EAR+EL  IL +  +    T+L+F NKQDLP A+  S +  KLGL     + L +RNWY+Q CCA +GE +Y+GLDWL   ++K
Sbjct:    1 MGMTISTLVRMLFAKKEMRILMVGLDAAGKTTILYKLKLGEVITTIPTIGFNVETVEYKNVSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVIDSNDRERIAEARNELHRILSEDELRGA-TLLVFANKQDLPNAMRVSEITDKLGL-----HSLRQRNWYIQSCCAASGEGLYEGLDWLSSNISK 179          
BLAST of mRNA_E-siliculosus-1a_M_contig90.17127.1 vs. uniprot
Match: A0A3S3Q2S8_9MAGN (ADP-ribosylation factor n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A3S3Q2S8_9MAGN)

HSP 1 Score: 212 bits (539), Expect = 4.110e-67
Identity = 104/186 (55.91%), Postives = 133/186 (71.51%), Query Frame = 0
Query:    1 MGQIIARLANILNGLQEKRLLLLGLDAAGKTSLLYRLHLNEVVTTIPTIGFNVERVEYNRMMMTIWDIGGQTKLRPLWHHYFINTDALIFVVDSNDHERIEEARDELFHILQDPNMDDCQTVLIFLNKQDLPGAISPSAMRSKLGLDGAGRNPLMKRNWYMQGCCAVTGERVYDGLDWLRGALNKK 186
            MG  I+RL   L   +E R+L++GLDAAGKT++LY+L L E+VTTIPTIGFNVE V+Y  +  T+WD+GGQ K+RPLW HYF NT  LIFV+DSND ERI EARDEL  +L +  + D  T+L+F NKQDLP A+S S +  KLGL     + L +R WY+Q  CA TGE +Y+GLDWL   ++ K
Sbjct:    1 MGMTISRLIRQLFSRKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVDYKNVSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVIDSNDKERISEARDELHRMLSEEELRDA-TLLVFANKQDLPNAMSVSEITDKLGL-----HSLRQRRWYIQSACATTGEGLYEGLDWLSNNISTK 180          
BLAST of mRNA_E-siliculosus-1a_M_contig90.17127.1 vs. uniprot
Match: A0A0P1B1D9_PLAHL (Adp-ribosylation factor n=17 Tax=Peronosporaceae TaxID=4777 RepID=A0A0P1B1D9_PLAHL)

HSP 1 Score: 212 bits (539), Expect = 8.140e-67
Identity = 102/186 (54.84%), Postives = 132/186 (70.97%), Query Frame = 0
Query:    1 MGQIIARLANILNGLQEKRLLLLGLDAAGKTSLLYRLHLNEVVTTIPTIGFNVERVEYNRMMMTIWDIGGQTKLRPLWHHYFINTDALIFVVDSNDHERIEEARDELFHILQDPNMDDCQTVLIFLNKQDLPGAISPSAMRSKLGLDGAGRNPLMKRNWYMQGCCAVTGERVYDGLDWLRGALNKK 186
            MG   +R+   L G +E R+L++GLDAAGKT++LY+L L EVVTTIPTIGFNVE VEY  +  T+WD+GGQ K+RPLW HY+ NT  LIFVVDSND +R++ ARDEL  +L +  + D   +L+F NKQDLP A+S + M  KLGL G     L  R W++Q CCA TG+ +Y+GLDWL   L K+
Sbjct:    1 MGMAFSRVFERLFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRD-SVLLVFANKQDLPNAMSAAEMTDKLGLHG-----LRHRQWFIQACCATTGDGLYEGLDWLSATLQKQ 180          
BLAST of mRNA_E-siliculosus-1a_M_contig90.17127.1 vs. uniprot
Match: B9SG01_RICCO (ADP-ribosylation factor n=9 Tax=Mesangiospermae TaxID=1437183 RepID=B9SG01_RICCO)

HSP 1 Score: 211 bits (537), Expect = 8.280e-67
Identity = 103/186 (55.38%), Postives = 134/186 (72.04%), Query Frame = 0
Query:    1 MGQIIARLANILNGLQEKRLLLLGLDAAGKTSLLYRLHLNEVVTTIPTIGFNVERVEYNRMMMTIWDIGGQTKLRPLWHHYFINTDALIFVVDSNDHERIEEARDELFHILQDPNMDDCQTVLIFLNKQDLPGAISPSAMRSKLGLDGAGRNPLMKRNWYMQGCCAVTGERVYDGLDWLRGALNKK 186
            MG  I+RL  +L   +E R+L++GLDAAGKT++LY+L L E+VTTIPTIGFNVE VEY  +  T+WD+GGQ K+RPLW HYF NT  LIFVVDSND ERI EARDEL  +L +  + D  T+L+F NKQDLP A++ S +  KLGL     + L +R WY+Q  CA +G+ +Y+GLDWL   ++ K
Sbjct:    1 MGMAISRLIKLLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNVSFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERISEARDELQRMLSEDELRDA-TLLVFANKQDLPNAMTVSEVTDKLGL-----HSLRQRRWYIQATCATSGQGLYEGLDWLSSNISSK 180          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig90.17127.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKJ1_ECTSI3.570e-13198.39Arf2A, ARF family GTPase n=1 Tax=Ectocarpus silicu... [more]
D8LKJ9_ECTSI4.050e-9368.82Arf2B, ARF family GTPase n=2 Tax=Ectocarpus TaxID=... [more]
A1XKU1_SUBDO9.510e-6857.30ADP-ribosylation factor n=1 Tax=Suberites domuncul... [more]
M4BN95_HYAAE9.820e-6855.38ADP-ribosylation factor n=8 Tax=Oomycota TaxID=476... [more]
A0A1R3GES4_COCAP1.200e-6755.91ADP-ribosylation factor n=1 Tax=Corchorus capsular... [more]
K3WYT4_GLOUD1.390e-6755.38ADP-ribosylation factor n=30 Tax=Stramenopiles Tax... [more]
UPI001929E3303.980e-6755.68ADP-ribosylation factor 1-like n=1 Tax=Dioscorea c... [more]
A0A3S3Q2S8_9MAGN4.110e-6755.91ADP-ribosylation factor n=1 Tax=Cinnamomum micrant... [more]
A0A0P1B1D9_PLAHL8.140e-6754.84Adp-ribosylation factor n=17 Tax=Peronosporaceae T... [more]
B9SG01_RICCO8.280e-6755.38ADP-ribosylation factor n=9 Tax=Mesangiospermae Ta... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006689Small GTPase superfamily, ARF/SAR typePRINTSPR00328SAR1GTPBPcoord: 47..71
score: 25.41
coord: 74..99
score: 38.91
coord: 120..141
score: 40.64
coord: 19..42
score: 51.23
IPR006689Small GTPase superfamily, ARF/SAR typePFAMPF00025Arfcoord: 12..180
e-value: 9.3E-62
score: 207.6
NoneNo IPR availableSMARTSM00177arf_sub_2coord: 1..186
e-value: 1.5E-75
score: 267.0
NoneNo IPR availableSMARTSM00178sar_sub_1coord: 1..183
e-value: 7.2E-18
score: 75.4
NoneNo IPR availableGENE3D3.40.50.300coord: 18..182
e-value: 1.6E-59
score: 202.2
NoneNo IPR availablePANTHERPTHR11711ADP RIBOSYLATION FACTOR-RELATEDcoord: 1..182
NoneNo IPR availablePANTHERPTHR11711:SF314coord: 1..182
NoneNo IPR availablePROSITEPS51417ARFcoord: 11..186
score: 20.554
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 16..138
e-value: 7.2E-18
score: 62.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 18..182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig90contigE-siliculosus-1a_M_contig90:219712..222262 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig90.17127.1mRNA_E-siliculosus-1a_M_contig90.17127.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig90 218582..222410 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig90.17127.1 ID=prot_E-siliculosus-1a_M_contig90.17127.1|Name=mRNA_E-siliculosus-1a_M_contig90.17127.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=187bp
MGQIIARLANILNGLQEKRLLLLGLDAAGKTSLLYRLHLNEVVTTIPTIG
FNVERVEYNRMMMTIWDIGGQTKLRPLWHHYFINTDALIFVVDSNDHERI
EEARDELFHILQDPNMDDCQTVLIFLNKQDLPGAISPSAMRSKLGLDGAG
RNPLMKRNWYMQGCCAVTGERVYDGLDWLRGALNKK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR005225Small_GTP-bd_dom
IPR006689Small_GTPase_ARF/SAR