prot_E-siliculosus-1a_M_contig90.17123.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig90.17123.1
Unique Nameprot_E-siliculosus-1a_M_contig90.17123.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length653
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig90.17123.1 vs. uniprot
Match: D8LKI8_ECTSI (Divergent RAB-like GTPase, N-terminal myristoylation predicted by ExPASy Myristoylator n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKI8_ECTSI)

HSP 1 Score: 584 bits (1505), Expect = 1.830e-204
Identity = 299/308 (97.08%), Postives = 303/308 (98.38%), Query Frame = 0
Query:    1 MGQAASCCSFCCPCPLRRKAAAVPGATSEDQSKLLPSSSTKKAHKPRKEKCSKYRRPPSHLRELSGDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDIGHQDYTRQAQAITLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSKETLRALRSTWAPFLDKHTPRTCRVLLAGNKADARGDFGVNGGEVSDEDAKRFAEAMEAQVFETSAKLGTNVDVAVMALMQEVLHHRQFAAEDKAGSSKKGSSPARRGRKRLSVALKGVMERKGDRDSASSCAAQSGIGRSPAN 308
            MGQAASCCSFCCPCPLRRKAAAVPGAT+EDQSKLLPSSSTKKAHKPRKEKCSKYRRPPSHLRELSGDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDIGHQDYTRQAQAITLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSK TLR+LRSTWAPFLDKHTPRTCRVLLAGNKADARGDFGVNGGEVS EDAKRFAEAMEAQVFETSAKLGTNVDVAVMALMQEVLHHRQFAAEDKA SSKKGSSPARRGRKRLSV+LKGVMER GDRD ASSCAAQSGIGRSP+N
Sbjct:    1 MGQAASCCSFCCPCPLRRKAAAVPGATTEDQSKLLPSSSTKKAHKPRKEKCSKYRRPPSHLRELSGDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDIGHQDYTRQAQAITLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSK-TLRSLRSTWAPFLDKHTPRTCRVLLAGNKADARGDFGVNGGEVSHEDAKRFAEAMEAQVFETSAKLGTNVDVAVMALMQEVLHHRQFAAEDKARSSKKGSSPARRGRKRLSVSLKGVMERNGDRDIASSCAAQSGIGRSPSN 307          
BLAST of mRNA_E-siliculosus-1a_M_contig90.17123.1 vs. uniprot
Match: A0A835YYU6_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYU6_9STRA)

HSP 1 Score: 127 bits (320), Expect = 2.020e-30
Identity = 63/128 (49.22%), Postives = 79/128 (61.72%), Query Frame = 0
Query:   72 VRLVLVGGCDTGKTCLLRRFLGGYF--DDIGHQDYTRQAQAITLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSKETLRALRSTWAPFLDKHTPRTCRVLLAGNKAD 197
            VRLV+VG C  GKT ++RR+L GYF  D      Y+      TLGVDFGC+TV L  +RVRLQ+WDT GS  Y SVVSHYL  ADGV + +D    E+ + ++  W P +  + P   R LL GNK D
Sbjct:    5 VRLVMVGDCGVGKTAIMRRYLNGYFCGDTAKGTPYSS-----TLGVDFGCKTVHLEGKRVRLQVWDTSGSARYGSVVSHYLHAADGVALVYDTTCAESFQRVQDYWLPLVKSYAPEAVRFLLVGNKCD 127          
BLAST of mRNA_E-siliculosus-1a_M_contig90.17123.1 vs. uniprot
Match: H3GC27_PHYRM (Uncharacterized protein n=26 Tax=Oomycota TaxID=4762 RepID=H3GC27_PHYRM)

HSP 1 Score: 125 bits (314), Expect = 4.120e-29
Identity = 71/201 (35.32%), Postives = 110/201 (54.73%), Query Frame = 0
Query:   64 LSGDINQVVRLVLVGGCDTGKTCLLRRFLGG--------YFDDIGHQDYTRQAQAITLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSKETLRALRSTWAPFLDKHTPRTCRVLLAGNKADARGDFGVNGGEVSDEDAKRFAEAMEAQVFETSAKLGTNVDVAVMALMQEVLHHRQFAAE 256
            +S D + + +LVL+G    GK+CLL RF GG        Y  D    D   ++   T+GVDF  RTV + ++ V+LQ+WDT G E +R++ S Y RGADG++M +DV S+E+   +   W   ++++       LL GNK+D   +  V     S E AK FA+++     ETSAK   NV+ A + +  E++  R+   +
Sbjct:    1 MSRDYDHLFKLVLIGDSGVGKSCLLLRFAGGRLLDRLTEYVADASQDDAFTESYITTIGVDFRFRTVKIDNKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFDHVND-WLNEVNRYASEGTCKLLVGNKSDISDNKAV-----SYETAKAFADSLSIPFLETSAKNAQNVEEAFLTMASELITIREMVGD 195          
BLAST of mRNA_E-siliculosus-1a_M_contig90.17123.1 vs. uniprot
Match: A0A0M0JKI6_9EUKA (Ras-related protein ric1 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JKI6_9EUKA)

HSP 1 Score: 122 bits (306), Expect = 3.030e-28
Identity = 70/184 (38.04%), Postives = 103/184 (55.98%), Query Frame = 0
Query:   64 LSGDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDIGHQDYTRQAQAITLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSKETLRALRSTWAPFLDKHTPRTCRVLLAGNKADARGDFGVNGGEVSDEDAKRFAEAMEAQVFETSAKLGTNVDVAVMALMQEV 247
            +  D + +  LVL+G    GK+CLL RF     DD     Y       T+GVDF  RT++L  + ++LQ+WDT G E +R++ S Y RGA G+++ +DV ++ +   ++  W   +DK+       LL GNKAD   D  V+  +VS ED K FAE ++    ETSAK GT VD A + +  E+
Sbjct:    1 MKPDYDYLFILVLIGDSGVGKSCLLLRFA----DDKWTDSYIS-----TIGVDFKIRTIELDQKTIKLQIWDTAGQERFRTISSTYYRGAHGIIVVYDVTNRTSFDNVQR-WLTEIDKYARENVNKLLVGNKADIADD--VHNRQVSQEDGKAFAEKVDVPFLETSAKTGTFVDTAFLMMAHEI 172          
BLAST of mRNA_E-siliculosus-1a_M_contig90.17123.1 vs. uniprot
Match: A0A835Z965_9STRA (Rab1A, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z965_9STRA)

HSP 1 Score: 120 bits (301), Expect = 1.660e-27
Identity = 72/196 (36.73%), Postives = 109/196 (55.61%), Query Frame = 0
Query:   67 DINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDIGHQDYTRQAQAITLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSKETLRALRSTWAPFLDKHTPRTCRVLLAGNKADARGDFGVNGGEVSDEDAKRFAEAMEAQVFETSAKLGTNVDVAVMALMQEVLHHRQFAAEDKAGSS 262
            D + + +LVL+G    GK+CLL RF    F D         +   T+GVDF  RTV +  + V+LQ+WDT G E +R++ S Y RGADG++M +DV S+E+   +   W   ++++       LL GNK+D R D  V     + E AK FA+++     ETSAK  +NV+ A + +  E++  R+  A  +A SS
Sbjct:    5 DYDHLFKLVLIGDSGVGKSCLLLRFADDAFTD---------SYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFGHVND-WLSEVNRYASEGTSKLLIGNKSD-RADKAV-----TTEQAKSFAQSLGIPFLETSAKSASNVEEAFLTMASELIRTREARAAQQAESS 184          
BLAST of mRNA_E-siliculosus-1a_M_contig90.17123.1 vs. uniprot
Match: A0A6V1NVS4_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NVS4_HETAK)

HSP 1 Score: 120 bits (301), Expect = 3.170e-27
Identity = 68/191 (35.60%), Postives = 111/191 (58.12%), Query Frame = 0
Query:   67 DINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDIGHQDYTRQAQAITLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSKETLRALRSTWAPFLDKHTPRTCRVLLAGNKADARGDFGVNGGEVSDEDAKRFAEAMEAQVFETSAKLGTNVDVAVMALMQEVLHHRQFAAED 257
            D + + +LVL+G    GK+CLL RF     DD   + Y       T+GVDF  +TV +  + V+LQ+WDT G E +R++ S Y RGADG++M +DV +KE+   + S W   ++++       LL GNK+D R +   +  +V+ E+AK++A+ +     ETSAK  +NV+ A + +  +++  R+   ED
Sbjct:   30 DYDHLFKLVLIGDSGVGKSCLLLRFA----DDAFTESYIS-----TIGVDFRFKTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVMNKESFEHV-SAWLSEVNRYANEGTCKLLVGNKSD-RAEEAPDARQVAAEEAKKYADDLGIPFIETSAKSASNVEEAFLTMASQLIQLREARGED 209          
BLAST of mRNA_E-siliculosus-1a_M_contig90.17123.1 vs. uniprot
Match: A0A7S4Q6D0_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4Q6D0_9DINO)

HSP 1 Score: 121 bits (303), Expect = 3.470e-27
Identity = 69/182 (37.91%), Postives = 105/182 (57.69%), Query Frame = 0
Query:   66 GDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDIGHQDYTRQAQAITLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSKETLRALRSTWAPFLDKHTPRTCRVLLAGNKADARGDFGVNGGEVSDEDAKRFAEAMEAQVFETSAKLGTNVDVAVMALMQEV 247
            GD + + +++++G C  GK+ LLRRF+ G        +Y+ Q  A T+GVDFG R+  +  ++V+LQ+WDT GSE +RS+ S Y +GA GV++ FDV+ ++T   +   W     KH P + R +L GNK D  G     G  VS ++A   A+ +   + E SAK   NV+ A + L Q V
Sbjct:   24 GDFDFIFKILVIGDCGVGKSSLLRRFVDG--------EYSTQYTA-TIGVDFGQRSCTVDGKKVKLQIWDTAGSERFRSITSGYYKGAHGVIVVFDVSDRKTFDHV-GFWLAEAGKHAPTSARRMLVGNKCDIEGP----GRAVSRDEALELADRLGLPLLEASAKSAENVEAAFLTLAQVV 191          
BLAST of mRNA_E-siliculosus-1a_M_contig90.17123.1 vs. uniprot
Match: L0B2B3_THEEQ (Ras related Rab1a small GTP-binding protein n=1 Tax=Theileria equi strain WA TaxID=1537102 RepID=L0B2B3_THEEQ)

HSP 1 Score: 119 bits (298), Expect = 3.600e-27
Identity = 67/184 (36.41%), Postives = 102/184 (55.43%), Query Frame = 0
Query:   65 SGDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDIGHQDYTRQAQAITLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSKETLRALRSTWAPFLDKHTPRTCRVLLAGNKADARGDFGVNGGEVSDEDAKRFAEAMEAQVFETSAKLGTNVDVAVMALMQEVL 248
            S D + + +LVLVG    GK+CLL RF    F D         +   T+GVDF  RT+ + D+RV+LQ+WDT G E +R++ S Y RGADG+++ +D+  K +   + S W   +DK+       LL GNK+D + +      +V   D KR +E +   V E SAK G NV+ A  ++ + ++
Sbjct:    6 SKDYDYLFKLVLVGDSGVGKSCLLLRFADDSFTD---------SYITTIGVDFRFRTIKVNDKRVKLQIWDTAGQERFRTITSTYYRGADGIVLAYDLTDKSSFDHI-SDWLAEVDKYAAEDTCKLLVGNKSDIQENR-----DVDPSDVKRLSELVNIPVMEVSAKTGENVEKAFFSITERLV 174          
BLAST of mRNA_E-siliculosus-1a_M_contig90.17123.1 vs. uniprot
Match: A0A3P3YFJ2_PLABS (Uncharacterized protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YFJ2_PLABS)

HSP 1 Score: 120 bits (300), Expect = 4.910e-27
Identity = 73/208 (35.10%), Postives = 116/208 (55.77%), Query Frame = 0
Query:   61 LRELSGDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDIGHQDYTRQAQAITLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSKETLRALRSTWAPFLDKHTPRTCRVLLAGNKADARGDFGVNGGEVSDEDAKRFAEAMEAQVFETSAKLGTNVDVAVMALMQEVLHHRQFA-AEDKAGSSKKGSS 267
            +  +  D + + +LVL+G    GK+CLL RF    F D         +   T+GVDF  RTV++ ++ V+LQ+WDT G E +R++ S Y RGA G+++ +DV S  +   +   W   +++H   +   LL GNKAD      V+  +V++E AK+FA+ +   + ETSAK  TNV+ A + + +E++  R    A  K G S +G S
Sbjct:   35 MASMKRDYDYLFKLVLIGDSGVGKSCLLLRFADDSFTD---------SYISTIGVDFRFRTVNIDNKMVKLQIWDTAGQERFRTITSAYYRGAHGIILVYDVTSSGSFDHVEE-WLLEVNRHASASTIKLLIGNKADL-----VDQKQVTEETAKKFADKLGITLLETSAKNSTNVEAAFLTMARELIAARVAEQAPGKGGVSLQGGS 227          
BLAST of mRNA_E-siliculosus-1a_M_contig90.17123.1 vs. uniprot
Match: A0A7S1R9U1_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1R9U1_ALECA)

HSP 1 Score: 119 bits (299), Expect = 7.590e-27
Identity = 68/182 (37.36%), Postives = 105/182 (57.69%), Query Frame = 0
Query:   66 GDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDIGHQDYTRQAQAITLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYLRGADGVMMCFDVNSKETLRALRSTWAPFLDKHTPRTCRVLLAGNKADARGDFGVNGGEVSDEDAKRFAEAMEAQVFETSAKLGTNVDVAVMALMQEV 247
            GD + + +LV++G    GK+ LLRRF+ G +D      YT      T+GVDFG R+  L  ++V+LQ+WDT GSE +R++ S Y RGA GV++ FDV+ +++   +R  W     K  P T R +L GNK D  G+    G  +S ++A   A+ +   + E SAK   NV+ A ++L + +
Sbjct:    9 GDADFIFKLVVIGDLGVGKSALLRRFVDGLYDTT----YTA-----TIGVDFGTRSCTLDGKKVKLQIWDTAGSERFRAITSSYYRGAHGVIVVFDVSDRKSFERVRY-WLAEAGKSAPVTARRMLVGNKCDLTGE----GRSISRDEAFDLADGLGVPLVEASAKSSENVEEAFLSLARAI 176          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig90.17123.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKI8_ECTSI1.830e-20497.08Divergent RAB-like GTPase, N-terminal myristoylati... [more]
A0A835YYU6_9STRA2.020e-3049.22P-loop containing nucleoside triphosphate hydrolas... [more]
H3GC27_PHYRM4.120e-2935.32Uncharacterized protein n=26 Tax=Oomycota TaxID=47... [more]
A0A0M0JKI6_9EUKA3.030e-2838.04Ras-related protein ric1 n=1 Tax=Chrysochromulina ... [more]
A0A835Z965_9STRA1.660e-2736.73Rab1A, rab family GTPase n=1 Tax=Tribonema minus T... [more]
A0A6V1NVS4_HETAK3.170e-2735.60Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S4Q6D0_9DINO3.470e-2737.91Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
L0B2B3_THEEQ3.600e-2736.41Ras related Rab1a small GTP-binding protein n=1 Ta... [more]
A0A3P3YFJ2_PLABS4.910e-2735.10Uncharacterized protein n=2 Tax=Plasmodiophora bra... [more]
A0A7S1R9U1_ALECA7.590e-2737.36Hypothetical protein n=1 Tax=Alexandrium catenella... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 72..93
score: 37.6
coord: 185..198
score: 36.69
coord: 122..144
score: 36.79
coord: 225..247
score: 34.19
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 69..250
e-value: 2.0E-7
score: -5.9
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 74..246
e-value: 1.4E-9
score: 3.9
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 72..250
e-value: 3.4E-37
score: 139.5
NoneNo IPR availableGENE3D3.40.50.300coord: 66..275
e-value: 1.8E-44
score: 153.4
NoneNo IPR availablePANTHERPTHR24073:SF519RAS-RELATED PROTEIN RAB-44coord: 64..258
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 64..258
NoneNo IPR availablePROSITEPS51419RABcoord: 67..296
score: 21.766
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 72..240
e-value: 6.0E-18
score: 63.1
IPR001806Small GTPasePFAMPF00071Rascoord: 73..248
e-value: 1.9E-33
score: 115.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 69..253

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig90contigE-siliculosus-1a_M_contig90:205063..210578 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig90.17123.1mRNA_E-siliculosus-1a_M_contig90.17123.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig90 205063..210578 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig90.17123.1 ID=prot_E-siliculosus-1a_M_contig90.17123.1|Name=mRNA_E-siliculosus-1a_M_contig90.17123.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=653bp
MGQAASCCSFCCPCPLRRKAAAVPGATSEDQSKLLPSSSTKKAHKPRKEK
CSKYRRPPSHLRELSGDINQVVRLVLVGGCDTGKTCLLRRFLGGYFDDIG
HQDYTRQAQAITLGVDFGCRTVDLADRRVRLQMWDTGGSETYRSVVSHYL
RGADGVMMCFDVNSKETLRALRSTWAPFLDKHTPRTCRVLLAGNKADARG
DFGVNGGEVSDEDAKRFAEAMEAQVFETSAKLGTNVDVAVMALMQEVLHH
RQFAAEDKAGSSKKGSSPARRGRKRLSVALKGVMERKGDRDSASSCAAQS
GIGRSPANALCADATNTEGTSSVYSSSASHRDGDSSDQENNGRDKEDHGR
MWSMLPSTDDGITLGDGGEDRDDDARQEQQQVRALDNSIDGRLSKATRDC
QSESGRRGGGTPPRDSAGDSSNSGFKRGGRYHLINKLVIASPSSRGARTE
DIDVHRCCDRDDQSSGGCRRKPSHVEELDGYNRGRKADNRNVTSFPKPGT
VITPEVQARSMRPVAASRDEASSRVAVGCAPAPVPDEWHRLHGGGMAEAG
RDLVVPERKKISVDAAVREAPPCHPPAAGRSGALSEATSPPVIKTDQERR
DVHRGTPNGDSDRRNLRCNNPAIASANSSFSTVLAGHDHAHFQLASPVPE
QE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom