prot_E-siliculosus-1a_M_contig90.17113.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig90.17113.1
Unique Nameprot_E-siliculosus-1a_M_contig90.17113.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length184
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig90.17113.1 vs. uniprot
Match: D8LKH7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKH7_ECTSI)

HSP 1 Score: 293 bits (749), Expect = 4.150e-99
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0
Query:    1 MKVTASIATAVALLAPAQGFVISSSFVGAQHRCAAKSGASTTARPQQPXXXXXXXXXXXXXXXXXXXXDGGFNMGNMMEGLKKANEIGQKTKDLQKDLELLKVEGKSPCGMVTVTVTGQQMPLSCDISEEAMAEGAKAVAEKVAAAQQAAHTESLQTMSKRLAELYSEMGLPVGAGGGMPGAK 183
            MKVTASIATAVALLAPAQGFVISSSFVGAQHRCAAKSGASTTARPQQPXXXXXXXXXXXXXXXXXXXXDGGFNMGNMMEGLKKANEIGQKTKDLQKDLELLKVEGKSPCGMVTVTVTGQQMPLSCDISEEAMAEGAKAVAEKVAAAQQAAHTESLQTMSKRLAELYSEMGLPVGAGGGMPGAK
Sbjct:    1 MKVTASIATAVALLAPAQGFVISSSFVGAQHRCAAKSGASTTARPQQPXXXXXXXXXXXXXXXXXXXXDGGFNMGNMMEGLKKANEIGQKTKDLQKDLELLKVEGKSPCGMVTVTVTGQQMPLSCDISEEAMAEGAKAVAEKVAAAQQAAHTESLQTMSKRLAELYSEMGLPVGAGGGMPGAK 183          
BLAST of mRNA_E-siliculosus-1a_M_contig90.17113.1 vs. uniprot
Match: A0A835YMC5_9STRA (Nucleoid-associated protein YbaB family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMC5_9STRA)

HSP 1 Score: 112 bits (279), Expect = 5.580e-28
Identity = 58/104 (55.77%), Postives = 76/104 (73.08%), Query Frame = 0
Query:   71 GFNMGNMMEGLKKANEIGQKTKDLQKDLELLKVEGKSPCGMVTVTVTGQQMPLSCDISEEAMAEGAKAVAEKVAAAQQAAHTESLQTMSKRLAELYSEMGLPVG 174
            G NMG+MME LKKANEIG+K+K++Q +LE +++EGKS  G   VT+TGQQ+P+ C+I E  ++EG +AV   V  A   AH ESL  M K++AELY  MGLPVG
Sbjct:   62 GLNMGSMMESLKKANEIGRKSKEMQDELEKMRLEGKSSNGKAKVTMTGQQIPVGCEIDESLLSEGKEAVQTAVLEAMTEAHKESLMVMGKKMAELYQGMGLPVG 165          
BLAST of mRNA_E-siliculosus-1a_M_contig90.17113.1 vs. uniprot
Match: A0A7S3MQT1_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Favella ehrenbergii TaxID=182087 RepID=A0A7S3MQT1_9SPIT)

HSP 1 Score: 84.0 bits (206), Expect = 4.890e-17
Identity = 47/108 (43.52%), Postives = 70/108 (64.81%), Query Frame = 0
Query:   74 MGNMMEGLKKANEIGQKTKDLQKDLELLKVEGKSPCGMVTVTVTGQQMPLSCDISEEAMAEGAKAVAEKVAAAQQAAHTESLQTMSKRLAELYSEMGLPVGAGGGMPG 181
            MGNMME +KKA E+G K K LQ++L   +VE  S  G VTV ++G Q+P+   +++E  ++GAKAV+  +  A + AH  S++    +L ELY+E+GLP+   GG  G
Sbjct:   65 MGNMMETIKKAQEMGVKVKALQEELVNTEVEATSADGGVTVVISGAQVPMDVKVTDEMCSKGAKAVSAAITDAMREAHKNSMEYSKSKLTELYAEIGLPMPPEGGAGG 172          
BLAST of mRNA_E-siliculosus-1a_M_contig90.17113.1 vs. uniprot
Match: A0A7S2WN77_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WN77_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 1.160e-16
Identity = 48/109 (44.04%), Postives = 74/109 (67.89%), Query Frame = 0
Query:   74 MGNMMEGLKKANEIGQKTKDLQKDLELLKVEGKSPCGMVTVTVTGQQMPLSCDISEEAMAEGAKAVAEKVAAAQQAAHTESLQTMSKRLAELYSEMGLP-VGAGGGMPG 181
            MG+MME  KK  EIG+KTK+LQK+L  +++E KS    V+VT++GQQ  LS  IS++AM  G + V +++  + Q AH +S + M+ +L E+  ++ +P +G  GGMPG
Sbjct:   60 MGDMMEQFKKVQEIGRKTKELQKELAEMQIEEKSEDESVSVTISGQQAMLSAYISKDAMDAGKEEVEKRLMESLQKAHLKSFEVMNTKLMEITKDLDIPGLGGPGGMPG 168          
BLAST of mRNA_E-siliculosus-1a_M_contig90.17113.1 vs. uniprot
Match: R1FFN9_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FFN9_EMIHU)

HSP 1 Score: 82.0 bits (201), Expect = 1.990e-16
Identity = 43/105 (40.95%), Postives = 71/105 (67.62%), Query Frame = 0
Query:   74 MGNMMEGLKKANEIGQKTKDLQKDLELLKVEGKSPCGMVTVTVTGQQMPLSCDISEEAMAEGAKAVAEKVAAAQQAAHTESLQTMSKRLAELYSEMGLPVGAGGG 178
            MGNMME +KKA E+G K K LQ++L   ++E  +  G VTV ++G Q+P+   +SE+  ++GA+AV++ ++ A + AH  S++   ++L  LY+E+GLP+   GG
Sbjct:   56 MGNMMETIKKAQEVGVKVKALQEELVNTEIEATAADGGVTVVISGAQVPMDVKVSEDLCSKGAEAVSDAISLAMREAHKNSMEYSKQKLGALYAEIGLPMPPEGG 160          
BLAST of mRNA_E-siliculosus-1a_M_contig90.17113.1 vs. uniprot
Match: A0A0M0JAF8_9EUKA (Uncharacterized protein (Fragment) n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JAF8_9EUKA)

HSP 1 Score: 82.0 bits (201), Expect = 3.550e-16
Identity = 42/98 (42.86%), Postives = 69/98 (70.41%), Query Frame = 0
Query:   76 NMMEGLKKANEIGQKTKDLQKDLELLKVEGKSPCGMVTVTVTGQQMPLSCDISEEAMAEGAKAVAEKVAAAQQAAHTESLQTMSKRLAELYSEMGLPV 173
            NMME +KKA ++G K K LQ++L   ++E  S  G  TV ++G Q+P+S +++E  +A+G+KAV+E V+ A + AHT S+    +++A LY+E+GLP+
Sbjct:   88 NMMETIKKAQQVGVKVKALQEELAQTEIEAISADGGCTVVISGAQVPISVEVTEALLAKGSKAVSEAVSVAAKEAHTNSVSYAQEQMATLYAEIGLPI 185          
BLAST of mRNA_E-siliculosus-1a_M_contig90.17113.1 vs. uniprot
Match: A0A6U1PR94_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1PR94_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 2.130e-15
Identity = 43/113 (38.05%), Postives = 67/113 (59.29%), Query Frame = 0
Query:   71 GFNMGNMMEGLKKANEIGQKTKDLQKDLELLKVEGKSPCGMVTVTVTGQQMPLSCDISEEAMAEGAKAVAEKVAAAQQAAHTESLQTMSKRLAELYSEMGLPVGAGGGMPGAK 183
            G  + NMME  KKA E+G+K K++Q++L  +++EGKS  G       GQQ+P+  +I E  ++EG   V      A   +H  +L TM+K++A++Y  +GLP    GG+ G K
Sbjct:   82 GGGLPNMMEAFKKAQEVGKKAKEMQEELGKMEIEGKSSNGKAMAFCNGQQIPIRVEIDESLLSEGKDIVGVAAVEAMFDSHDIALDTMTKKMADMYESIGLPKDLMGGLTGGK 194          
BLAST of mRNA_E-siliculosus-1a_M_contig90.17113.1 vs. uniprot
Match: A0A7S3ESI0_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ESI0_9EUKA)

HSP 1 Score: 76.6 bits (187), Expect = 2.570e-14
Identity = 41/98 (41.84%), Postives = 66/98 (67.35%), Query Frame = 0
Query:   76 NMMEGLKKANEIGQKTKDLQKDLELLKVEGKSPCGMVTVTVTGQQMPLSCDISEEAMAEGAKAVAEKVAAAQQAAHTESLQTMSKRLAELYSEMGLPV 173
            NMME +KKA ++G K K+LQ++L   ++E  +  G V+V+V+G  +P+S  +S E +A+GA+AV+  V  A + AH  S+     R+ ELY+E+GLP+
Sbjct:   64 NMMETIKKAQQVGVKVKELQEELANTEIEATAAEGGVSVSVSGANVPISVTVSPELVAQGAEAVSTAVTLATKEAHRNSMAYAKDRMTELYTEIGLPM 161          
BLAST of mRNA_E-siliculosus-1a_M_contig90.17113.1 vs. uniprot
Match: A0A7S4B6N1_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B6N1_CHRCT)

HSP 1 Score: 76.3 bits (186), Expect = 4.850e-14
Identity = 46/102 (45.10%), Postives = 70/102 (68.63%), Query Frame = 0
Query:   79 EGLKKANEIGQKTKDLQKDLELLKVEGKSPCGMVTVTVTGQQMPLSCDISEEAMAEGAKAVAEKVAAAQQAAHTESLQTMSKRLAELYSEMGLPVGAGGGMP 180
            E +KK +E+GQK ++LQ++L   +VE  +  G + V VTG Q+PLS ++S+E +A GA+ ++E+VAAA + AH +S     +R+AELY +MGL    G GMP
Sbjct:   83 EMMKKYSEVGQKVQELQEELTQTEVECSTNEGGIVVKVTGTQVPLSVEVSDEMLAGGAEKLSEQVAAALKQAHAKSGGYAQQRMAELYDQMGL----GAGMP 180          
BLAST of mRNA_E-siliculosus-1a_M_contig90.17113.1 vs. uniprot
Match: A0A2N5JN90_9CYAN (Nucleoid-associated protein CV045_10450 n=1 Tax=Cyanobacteria bacterium M5B4 TaxID=2054928 RepID=A0A2N5JN90_9CYAN)

HSP 1 Score: 74.3 bits (181), Expect = 4.940e-14
Identity = 39/103 (37.86%), Postives = 70/103 (67.96%), Query Frame = 0
Query:   70 GGFNMGNMMEGLKKANEIGQKTKDLQKDLELLKVEGKSPCGMVTVTVTGQQMPLSCDISEEAMAEGAKAVAEKVAAAQQAAHTESLQTMSKRLAELYSEMGLP 172
            GGF +G + E  +KAN++ +++++LQ +LE ++++G++  G+V VTV+G Q P +  I+ EA+ +G + + + V  A + A+  S QTM  R+ EL +E+GLP
Sbjct:    5 GGFGLGKIKEAFQKANQLKERSQELQSELEEMRLDGEAGGGLVKVTVSGNQEPQAIVIAPEAIEQGKEVLEDLVLTAMRNAYQLSAQTMKNRMEELTNELGLP 107          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig90.17113.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
D8LKH7_ECTSI4.150e-99100.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YMC5_9STRA5.580e-2855.77Nucleoid-associated protein YbaB family n=1 Tax=Tr... [more]
A0A7S3MQT1_9SPIT4.890e-1743.52Hypothetical protein (Fragment) n=1 Tax=Favella eh... [more]
A0A7S2WN77_9STRA1.160e-1644.04Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
R1FFN9_EMIHU1.990e-1640.95Uncharacterized protein n=2 Tax=Emiliania huxleyi ... [more]
A0A0M0JAF8_9EUKA3.550e-1642.86Uncharacterized protein (Fragment) n=1 Tax=Chrysoc... [more]
A0A6U1PR94_9STRA2.130e-1538.05Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3ESI0_9EUKA2.570e-1441.84Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A7S4B6N1_CHRCT4.850e-1445.10Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A2N5JN90_9CYAN4.940e-1437.86Nucleoid-associated protein CV045_10450 n=1 Tax=Cy... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036894Nucleoid-associated protein YbaB-like domain superfamilyGENE3D3.30.1310.10coord: 70..177
e-value: 7.4E-18
score: 66.4
IPR036894Nucleoid-associated protein YbaB-like domain superfamilySUPERFAMILY82607YbaB-likecoord: 81..172
IPR004401Nucleoid-associated protein YbaB/EbfC familyPFAMPF02575YbaB_DNA_bdcoord: 82..169
e-value: 9.4E-14
score: 51.4
IPR004401Nucleoid-associated protein YbaB/EbfC familyTIGRFAMTIGR00103TIGR00103coord: 72..170
e-value: 2.2E-14
score: 51.4
IPR004401Nucleoid-associated protein YbaB/EbfC familyPANTHERPTHR33449FAMILY NOT NAMEDcoord: 31..178
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..183
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.65
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig90contigE-siliculosus-1a_M_contig90:87955..97814 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig90.17113.1mRNA_E-siliculosus-1a_M_contig90.17113.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig90 86912..97814 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig90.17113.1 ID=prot_E-siliculosus-1a_M_contig90.17113.1|Name=mRNA_E-siliculosus-1a_M_contig90.17113.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=184bp
MKVTASIATAVALLAPAQGFVISSSFVGAQHRCAAKSGASTTARPQQPAM
LFGGGGAKPAEGGGGEKKDGGFNMGNMMEGLKKANEIGQKTKDLQKDLEL
LKVEGKSPCGMVTVTVTGQQMPLSCDISEEAMAEGAKAVAEKVAAAQQAA
HTESLQTMSKRLAELYSEMGLPVGAGGGMPGAK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004401YbaB/EbfC
IPR036894YbaB-like_sf