prot_E-siliculosus-1a_M_contig9.17057.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig9.17057.1
Unique Nameprot_E-siliculosus-1a_M_contig9.17057.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length404
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig9.17057.1 vs. uniprot
Match: D7G4H9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H9_ECTSI)

HSP 1 Score: 733 bits (1891), Expect = 8.910e-266
Identity = 374/405 (92.35%), Postives = 384/405 (94.81%), Query Frame = 0 
Query:    1 MRQPLAKALAACKHPVPTDRAVRRWIGLPFNTTSSG--AKRGGTCYFVRRRSIATATTPRWGKGGASEGGDRGSGAISVHDIADLNKDISGYVGDLGDPDFDTTPSPPPDRAASGSRRNAQAEREDSPAAFQESQTRLTLADHPGKIQGLAGERDEEIPMDDDWSTSLVKGYLETVERKNSSGLRARKSVLVLNGPACFIAGTLASTGEPRGVVASSMEDAAQEFNLSLTVCTSNREDELLDRLCEGGYDAVVFNPSGFSNQGWRAVVPTAAPTHRTMTDASPASNNSGTAVHTEPADDGFPQPQQSRVDDPLQKTWDDNVPRHSGSGSALEYGLERAGCPVVIISPGRDRNLGANMLPLSSRGPDVDLGCRSERGAEGIIAGFSGAVSYRLAMAAVSSVLDGSR 403
            MR+PLAKALAACKHPVPTDRAVRRWIGLPFNTT S   AKRGGTCYFVRRRSIATAT PRWGKGGASEG DRGS AISVHDIADLNKDISG+VGDLGDPDFDT PSPPPDRAASGSRR+AQAERE+SPAAFQESQ RLTLADHPGK +GL G+RDEEIPMDDDWST LVKGYLET ERKNSSGLRAR+ VLVLNGPACFIAGTLASTGEPRGVVASSMEDAAQEFNLSLTVCTSNREDELLDRLCEGGYDAVV+NPSGFSNQG RAVVPTAA  HRTMTDASPASNNSGTAVHTEPADDGFPQPQQSRVD+P QKTWDDNVPRHSGSGSALEYGLERAGCPVVIISPGRD NLGANMLP +SRGPDVDLGCRSERGAEGIIAGFSGAVSYRLAMAAV SVLDGSR
Sbjct:    1 MRKPLAKALAACKHPVPTDRAVRRWIGLPFNTTRSSVLAKRGGTCYFVRRRSIATATPPRWGKGGASEGDDRGSAAISVHDIADLNKDISGFVGDLGDPDFDTIPSPPPDRAASGSRRDAQAEREESPAAFQESQPRLTLADHPGKFEGLHGQRDEEIPMDDDWSTPLVKGYLETEERKNSSGLRARRPVLVLNGPACFIAGTLASTGEPRGVVASSMEDAAQEFNLSLTVCTSNREDELLDRLCEGGYDAVVYNPSGFSNQGLRAVVPTAAQIHRTMTDASPASNNSGTAVHTEPADDGFPQPQQSRVDNPRQKTWDDNVPRHSGSGSALEYGLERAGCPVVIISPGRDGNLGANMLPSTSRGPDVDLGCRSERGAEGIIAGFSGAVSYRLAMAAVWSVLDGSR 405
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BLAST of mRNA_E-siliculosus-1a_M_contig9.17057.1 vs. uniprot
Match: A0A6H5KQA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQA9_9PHAE)

HSP 1 Score: 689 bits (1777), Expect = 1.930e-248
Identity = 353/403 (87.59%), Postives = 367/403 (91.07%), Query Frame = 0 
Query:    1 MRQPLAKALAACKHPVPTDRAVRRWIGLPFNTTSSGAKRGGTCYFVRRRSIATATTPRWGKGGASEGGDRGSGAISVHDIADLNKDISGYVGDLGDPDFDTTPSPPPDRAASGSRRNAQAEREDSPAAFQESQTRLTLADHPGKIQGLAGERDEEIPMDDDWSTSLVKGYLETVERKNSSGLRARKSVLVLNGPACFIAGTLASTGEPRGVVASSMEDAAQEFNLSLTVCTSNREDELLDRLCEGGYDAVVFNPSGFSNQGWRAVVPTAAPTHRTMTDASPASNNSGTAVHTEPADDGFPQPQQSRVDDPLQKTWDDNVPRHSGSGSALEYGLERAGCPVVIISPGRDRNLGANMLPLSSRGPDVDLGCRSERGAEGIIAGFSGAVSYRLAMAAVSSVLDGSR 403
            MR PLAK LAACKH V TDRAVRRWIGLPF+TTS  AKRGGTC F R RSIAT+TT R GKGGA E G+RGS    VHDIADLNKDISG+VGDLGDPDFDTTPSPPP RA SGSRRNAQAERED+PAAFQESQTRLTLADHPGK++GLAGERDEEIPMDDDWSTS VKGYLE VERK+SSG RAR+SVLVLNGPACFIAGTLASTGEPRG VASSMEDAAQEFNLSLTVCTSNREDELLDRLCEGGYDAVV+NPSGFSNQG R VVPTAAPTH+ MTDASPASN+SG A HTEPA+DGFPQ QQSRVDDP  KTW DNVPRHSGSGSALEYGLERAGCPVVIISPGRD NLGANML  +SRGPDVDLGCRSERGAEGIIAGFSGAVSYRLAMAAVSSVLDG R
Sbjct:    1 MRPPLAKTLAACKHLVLTDRAVRRWIGLPFSTTSMLAKRGGTCCFARSRSIATSTTSRGGKGGAPEDGERGSAEFWVHDIADLNKDISGFVGDLGDPDFDTTPSPPPARAVSGSRRNAQAEREDTPAAFQESQTRLTLADHPGKVEGLAGERDEEIPMDDDWSTSFVKGYLEAVERKSSSGSRARRSVLVLNGPACFIAGTLASTGEPRGAVASSMEDAAQEFNLSLTVCTSNREDELLDRLCEGGYDAVVYNPSGFSNQGLRVVVPTAAPTHQMMTDASPASNSSGNAAHTEPAEDGFPQSQQSRVDDPRHKTWHDNVPRHSGSGSALEYGLERAGCPVVIISPGRDGNLGANMLQSTSRGPDVDLGCRSERGAEGIIAGFSGAVSYRLAMAAVSSVLDGFR 403
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig9.17057.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G4H9_ECTSI8.910e-26692.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KQA9_9PHAE1.930e-24887.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036441Dehydroquinase, class II superfamilyGENE3D3.40.50.9100coord: 180..269
e-value: 2.0E-5
score: 25.8
IPR036441Dehydroquinase, class II superfamilySUPERFAMILY52304Type II 3-dehydroquinate dehydratasecoord: 185..262

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig9contigE-siliculosus-1a_M_contig9:1614772..1617621 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig9.17057.1mRNA_E-siliculosus-1a_M_contig9.17057.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig9 1614750..1618005 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig9.17057.1 ID=prot_E-siliculosus-1a_M_contig9.17057.1|Name=mRNA_E-siliculosus-1a_M_contig9.17057.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=404bp
MRQPLAKALAACKHPVPTDRAVRRWIGLPFNTTSSGAKRGGTCYFVRRRS
IATATTPRWGKGGASEGGDRGSGAISVHDIADLNKDISGYVGDLGDPDFD
TTPSPPPDRAASGSRRNAQAEREDSPAAFQESQTRLTLADHPGKIQGLAG
ERDEEIPMDDDWSTSLVKGYLETVERKNSSGLRARKSVLVLNGPACFIAG
TLASTGEPRGVVASSMEDAAQEFNLSLTVCTSNREDELLDRLCEGGYDAV
VFNPSGFSNQGWRAVVPTAAPTHRTMTDASPASNNSGTAVHTEPADDGFP
QPQQSRVDDPLQKTWDDNVPRHSGSGSALEYGLERAGCPVVIISPGRDRN
LGANMLPLSSRGPDVDLGCRSERGAEGIIAGFSGAVSYRLAMAAVSSVLD
GSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036441DHquinase_II_sf