prot_E-siliculosus-1a_M_contig9.17035.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig9.17035.1
Unique Nameprot_E-siliculosus-1a_M_contig9.17035.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length452
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig9.17035.1 vs. uniprot
Match: D7G1F1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1F1_ECTSI)

HSP 1 Score: 782 bits (2019), Expect = 9.600e-284
Identity = 421/451 (93.35%), Postives = 428/451 (94.90%), Query Frame = 0
Query:    1 MAPSVCRVVCIAALVGLLNEVLPVPARAPAASAGGGVDGGRRKNAHHRCRQDHVAHSSTGCLTSNTATPAPTSGGVREGGRSRVVGARPAWLVGSGSGRGRGLPRRKNGSPSSEEARAGGRASSVVGLRGGSTAAGEGLEEGTADVVRSMQILVSTTKISSYIDARGEVAARSDWTVGKLKEELEKKFPGKIPASLQRLFKGTQLLPSSMTLEEASEGAEGPLSLLLDNAPPIDASRFDPDTAVPFSKDGQVEAFSACLAAQSTLQETLLAVMRGENSEDDAELSRSVKMKADFENTKALLQRTLDEVPDKTGDEEETFGVLHEALRPLAHRHVPLDVNWMQTAQYTIFTYICAQFGATGTIRRLATLMLIPMMLLAQTRTARVGAKIVRNLVAEVPVLTQLFLGLLQAPTQVIISVDPEAYTRGLYGPGGPKYGKEFLDEGGDEESEETG 451
            M PSVCRVVCIAALVGLLNEVLPVPARAPAAS    V  GRRKNAHHRCRQDHVAHSSTGCLTSNTATPAP SGGV E G SRVVGARPAWLVGSGS    GLPRRK GS S++EARAG RASSVVGLRGGSTAAGEGLEEGTA VVRSMQILVSTTKISSYIDARGEVAARSDWTVGKLKEELEKKFPG+IPASLQRLFKGTQLLPSSMTLEEASEGAEGPLSLLLDNAPPIDASRFDPDTAVPFSKDGQVEAFSACLAAQSTLQETLLAVMRGENSEDDAELSRSVKMKADFENTKALLQRTLDEVPDKTGDEEETFG+LHEALRPLAHR   LDVNWMQTAQYTIFTYICAQFGATGTIRRLATLMLIPMMLLAQTR+ARVGAK+VRNLVAEVPVLTQLFLGLLQAPTQVIISVDP+AYTRGLYGPGGPKY KEFLDEGGDEESEETG
Sbjct:    1 MTPSVCRVVCIAALVGLLNEVLPVPARAPAASXXXXVGRGRRKNAHHRCRQDHVAHSSTGCLTSNTATPAPASGGVGEDGGSRVVGARPAWLVGSGSXXXXGLPRRKKGSSSTQEARAGARASSVVGLRGGSTAAGEGLEEGTAGVVRSMQILVSTTKISSYIDARGEVAARSDWTVGKLKEELEKKFPGRIPASLQRLFKGTQLLPSSMTLEEASEGAEGPLSLLLDNAPPIDASRFDPDTAVPFSKDGQVEAFSACLAAQSTLQETLLAVMRGENSEDDAELSRSVKMKADFENTKALLQRTLDEVPDKTGDEEETFGILHEALRPLAHR---LDVNWMQTAQYTIFTYICAQFGATGTIRRLATLMLIPMMLLAQTRSARVGAKMVRNLVAEVPVLTQLFLGLLQAPTQVIISVDPKAYTRGLYGPGGPKYDKEFLDEGGDEESEETG 448          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17035.1 vs. uniprot
Match: A0A836CA69_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA69_9STRA)

HSP 1 Score: 172 bits (435), Expect = 6.710e-46
Identity = 107/312 (34.29%), Postives = 169/312 (54.17%), Query Frame = 0
Query:  140 EEGTADVVRSMQILVSTTKISSYIDARGEVAARSDWTVGKLKEELEKKFPGKIPASLQRLFKGTQLLPSSMTLEEASEGAEGPLSLLLDNAPPIDASRFDPDTAVPFSKDGQVEAFSACLAAQSTLQETLLAVMRGENSEDDAELSRS-----VKMKADFENTKALLQRTLDEVPDKTGDEEETF--------GVLHEALRPLAHRHVPLDVNWMQTAQYTIFTYICAQFGATGTIRRLATLMLIPMMLLAQTRTARVGAKIVRNLVAEVPVLTQLFLGLLQAPTQVIISVDPEAYTRGLYGPGGPKYGKEF 438
            EE  A + +S+ ++V+T K+S ++D R ++      TV +LK++L + FPGK P  +QR+F G  LL   M L E ++ A G + L+LD  PPID   FDP TAVP ++D Q+EA+ A +AA + LQ      + G+ S   + L+ S     ++M++     +  LQ +        G  +           G LHE LRP+A   + LDV+W  +     F  +CA+FGA     R   L+ I ++ +A+ R  + G K+  N + ++P +T + + LL AP QV++  D +AY + LYG  GPK+  EF
Sbjct:   15 EELKARMAKSVDMVVTTLKLSGFVDQRCQLQLPGTATVRQLKDKLAQNFPGKPPVPVQRVFSGLTLLSDDMQLYEIAQSAPGRVQLVLDMPPPIDPEAFDPATAVPSNRDSQLEAYCANMAALTQLQSGARRALAGDKSPFSSPLAPSDMTCALEMQSHMSAVQGFLQGSYAPKEGDGGVRDGELPLPPLPPAGPLHEVLRPVA---MQLDVDWKNSLMMAFFVALCAKFGAFSPTLRAMRLLGIALIFVAKLRPVKYGIKVAYNKLRDLPFITDIIVALLPAPDQVLLQFDEKAYVQKLYGDAGPKFRPEF 323          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17035.1 vs. uniprot
Match: A0A0G4FT54_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FT54_VITBC)

HSP 1 Score: 63.2 bits (152), Expect = 4.060e-7
Identity = 84/338 (24.85%), Postives = 145/338 (42.90%), Query Frame = 0
Query:  150 MQILVSTTKISSYIDARGEVA-ARSDWTVGKLKEELEKKFPGKIPASLQRLFKGTQLLPSS-MTLEEASE--GAEGPLSLLLDNAPPIDASRFDPDTAVPFSKDGQVEAFSACLAA---QSTLQETLLAVMRGENSEDDAEL--------SRSVKMKADFENTKALLQRTLDEV-------------PDKTGDEEE----------------TFGVLHEALRPLA-----HRHVPL--DVNWMQTAQYTIFTYICAQFGATGTI----------RRLATLMLIPMMLLAQTRTARVGAKIVRNLVAEVPVLTQLFLGLLQAPTQVIISVDPEAYTRGL 426
            ++++V+T   S Y+D +  +  +  D  V  LK  +E+ +PGK PA+LQRLF G+Q L    M L +  +   A+ P ++LLD  PP+D ++     +   +++ +  A SA LAA    + L         GE+  D   L        S  V + A F +T   L+  +++              P+ +   EE                   V+H   RP +     HR V L  D++W  T +      +  +FG +G            +R   LM +P++ L Q+R  +  AK++ NL+        +   LL AP Q +++ + + +   L
Sbjct:   54 VRLVVTTASGSRYLDHKQLITLSPHDTLVRSLKAAIEQSYPGKPPATLQRLFVGSQALKDDDMDLADVIDDLSADEPATVLLDMVPPVDQTQGKMVVSK-MNEEEKRAALSAHLAALQYYAALWRRASGADSGEDVSDTDGLGDELKGDESSGVMLIARFRDTYRALEEAMEQQHMTKQKKARPPTSPEGSQQNEEGESTDHPTAPPPLQAFPEAVVHYPRRPRSLQGRLHRFVQLNLDIHWASTIRLAALLLVLWRFGPSGGSSSGSTPSEEQKRRLFLMCVPLVFLVQSRPVKFLAKLLFNLIPPSSYWDGV-ASLLPAPQQELLTFNQDKFVERL 389          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig9.17035.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G1F1_ECTSI9.600e-28493.35Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CA69_9STRA6.710e-4634.29Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A0G4FT54_VITBC4.060e-724.85Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.20.90coord: 154..224
e-value: 1.8E-5
score: 26.5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..451
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.608
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 168..227

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig9contigE-siliculosus-1a_M_contig9:1323242..1331833 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig9.17035.1mRNA_E-siliculosus-1a_M_contig9.17035.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig9 1322470..1331833 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig9.17035.1 ID=prot_E-siliculosus-1a_M_contig9.17035.1|Name=mRNA_E-siliculosus-1a_M_contig9.17035.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=452bp
MAPSVCRVVCIAALVGLLNEVLPVPARAPAASAGGGVDGGRRKNAHHRCR
QDHVAHSSTGCLTSNTATPAPTSGGVREGGRSRVVGARPAWLVGSGSGRG
RGLPRRKNGSPSSEEARAGGRASSVVGLRGGSTAAGEGLEEGTADVVRSM
QILVSTTKISSYIDARGEVAARSDWTVGKLKEELEKKFPGKIPASLQRLF
KGTQLLPSSMTLEEASEGAEGPLSLLLDNAPPIDASRFDPDTAVPFSKDG
QVEAFSACLAAQSTLQETLLAVMRGENSEDDAELSRSVKMKADFENTKAL
LQRTLDEVPDKTGDEEETFGVLHEALRPLAHRHVPLDVNWMQTAQYTIFT
YICAQFGATGTIRRLATLMLIPMMLLAQTRTARVGAKIVRNLVAEVPVLT
QLFLGLLQAPTQVIISVDPEAYTRGLYGPGGPKYGKEFLDEGGDEESEET
G*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029071Ubiquitin-like_domsf