prot_E-siliculosus-1a_M_contig9.17034.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig9.17034.1
Unique Nameprot_E-siliculosus-1a_M_contig9.17034.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length286
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig9.17034.1 vs. uniprot
Match: D7G1F2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1F2_ECTSI)

HSP 1 Score: 442 bits (1138), Expect = 4.420e-155
Identity = 249/282 (88.30%), Postives = 257/282 (91.13%), Query Frame = 0 
Query:    1 MASTLGVLDVLSKLREESERASTALTAQQETNRTLVQKCFEAETESGRTEEAKEALQLRKVQLEQGHRNAETGRREAESRLRRLQXXXXXXXXXXXXMRENTTAAGASAVAISKKFRADAFDSVRQIGELRARLRDKRGELESAEEEKRELDVEISNKKAARDKVKAEVASQLEAIAISCSKVDDIDRENKSLLARAKRVEGEIDEIREAQEEMQEMAVGLQRKNAILRHELRHLKRELEGDSPGQPRMVSSRDQGRNSNNNNAHGIGNGRYRVNGGSSLCC 282
            MASTLGVLDVLSKLREESERASTALTAQQETNRTL+QKC EAETESGRT+EAKEALQLRKVQLEQGH +AETGRREAE RLRRLQ            MRENTTAAGASAVAISK+FRADAFD VRQIGELRARLRDKRGELESAEE+KRELDVEISNKKA RD VKAEV SQLEA+A+SCSKVDDIDRENKSLLARAKRVEGEIDEIREAQEEMQEMAVGLQRKNAILRHELRHLKRELEG +P Q  MVSSRDQGRNSNNNNAH IGNGRYRVNGG SLCC
Sbjct:    1 MASTLGVLDVLSKLREESERASTALTAQQETNRTLLQKCIEAETESGRTDEAKEALQLRKVQLEQGHEDAETGRREAEGRLRRLQMQQARRKQAAARMRENTTAAGASAVAISKRFRADAFDRVRQIGELRARLRDKRGELESAEEDKRELDVEISNKKATRDTVKAEVTSQLEAVALSCSKVDDIDRENKSLLARAKRVEGEIDEIREAQEEMQEMAVGLQRKNAILRHELRHLKRELEGGNPAQSHMVSSRDQGRNSNNNNAHRIGNGRYRVNGGWSLCC 282
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig9.17034.1 vs. uniprot
Match: A0A6H5KAN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN2_9PHAE)

HSP 1 Score: 209 bits (533), Expect = 1.810e-64
Identity = 116/131 (88.55%), Postives = 122/131 (93.13%), Query Frame = 0 
Query:  143 SAEEEKRELDVEISNKKAARDKVKAEVASQLEAIAISCSKVDDIDRENKSLLARAKRVEGEIDEIREAQEEMQEMAVGLQRKNAILRHELRHLKRELEGDSPGQPRMVSSRDQGRNSNNNNAHGIGNGRYR 273
            SAEEEKRELDVEI NKKA RDKVKAEVAS+LEA+  SCSKVDDIDRENKSLLARAKRVEGEIDEIREAQEEMQEMAVGLQRKNAILRHELR+LKRELEGD+PGQP M+SSRDQG NSNN +AHGIGNG  R
Sbjct:   21 SAEEEKRELDVEIGNKKATRDKVKAEVASRLEAVTTSCSKVDDIDRENKSLLARAKRVEGEIDEIREAQEEMQEMAVGLQRKNAILRHELRYLKRELEGDNPGQPHMLSSRDQGCNSNNISAHGIGNGSQR 151
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig9.17034.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G1F2_ECTSI4.420e-15588.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KAN2_9PHAE1.810e-6488.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 127..168
NoneNo IPR availableCOILSCoilCoilcoord: 11..31
NoneNo IPR availableCOILSCoilCoilcoord: 183..238
NoneNo IPR availableCOILSCoilCoilcoord: 67..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig9contigE-siliculosus-1a_M_contig9:1317073..1320807 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig9.17034.1mRNA_E-siliculosus-1a_M_contig9.17034.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig9 1317073..1320807 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig9.17034.1 ID=prot_E-siliculosus-1a_M_contig9.17034.1|Name=mRNA_E-siliculosus-1a_M_contig9.17034.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=286bp
MASTLGVLDVLSKLREESERASTALTAQQETNRTLVQKCFEAETESGRTE
EAKEALQLRKVQLEQGHRNAETGRREAESRLRRLQQQQARRKQAAARMRE
NTTAAGASAVAISKKFRADAFDSVRQIGELRARLRDKRGELESAEEEKRE
LDVEISNKKAARDKVKAEVASQLEAIAISCSKVDDIDRENKSLLARAKRV
EGEIDEIREAQEEMQEMAVGLQRKNAILRHELRHLKRELEGDSPGQPRMV
SSRDQGRNSNNNNAHGIGNGRYRVNGGSSLCCWCW*
back to top