prot_E-siliculosus-1a_M_contig9.17030.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig9.17030.1
Unique Nameprot_E-siliculosus-1a_M_contig9.17030.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length399
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig9.17030.1 vs. uniprot
Match: A0A6H5KXU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXU8_9PHAE)

HSP 1 Score: 638 bits (1646), Expect = 1.210e-228
Identity = 365/399 (91.48%), Postives = 376/399 (94.24%), Query Frame = 0 
Query:    1 MVSPRILAVFCGLDLLQGASAWQPRSLRVPTST-TGQCRAVRDIVAGEHHRVRKQWSALRSVADGEGAGGAGRPDLASMKRAFEGTMDNKLIMEYVMELRSRKALLLSSLEETGGVITDDIYPIMEELALVNPSSGCGVGKDLGKSHYCAMLPGHWIAASTIVPNVPFVHGDGEKATNRSPSSRGAGPTCTLGELMSSISGRPVSGGELEYNADTPVRPLRARISALTNTVKDGEMPTVVAVAGFSPAAEAQPVKATGSEAGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGVRSEGFGRVADVVLTEDGAVRGRGKWGVRGGYHLRWEFNTMNLDLGGDKIVKAGAQDGDGGRDLYEFFLDQNMLIVAWKDAPKKEDAVVFVRDEVPR 398
            MVS R LAV CG+DLL G SAW P  LRV TST T Q  AVRDIVAGEH  VR+QWSALRSVADGEG GGAGRPDLASMKR+FEGTMDNKLIMEYV ELRSRKALLLSSLEETGGVITDDIYPIMEELALVNPSSGCGVGKD GKSHYCAMLPGHWIAASTIVPNVPFV+GDGEK+TNRSPSSRGAGPTCTLGEL+SSISGRPV+GG+LEYNADTPVRPLRARISALTNTVKDGEMPTVVAVAGFSPAAEAQPVKATGS AG  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGVR+EGFGRVADVVLTEDGAVRGRGKWGVRGGYHLRWEFNTMNLDLGGDKIVKAG + GDGGRDLYEFFLDQNMLIVAWKD+PKKEDAVVFVRDEVPR
Sbjct:    1 MVSSRTLAVVCGVDLLHGVSAWLPSPLRVSTSTATDQRWAVRDIVAGEHRDVRQQWSALRSVADGEGDGGAGRPDLASMKRSFEGTMDNKLIMEYVTELRSRKALLLSSLEETGGVITDDIYPIMEELALVNPSSGCGVGKDQGKSHYCAMLPGHWIAASTIVPNVPFVYGDGEKSTNRSPSSRGAGPTCTLGELVSSISGRPVTGGQLEYNADTPVRPLRARISALTNTVKDGEMPTVVAVAGFSPAAEAQPVKATGSAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGVRTEGFGRVADVVLTEDGAVRGRGKWGVRGGYHLRWEFNTMNLDLGGDKIVKAGGEGGDGGRDLYEFFLDQNMLIVAWKDSPKKEDAVVFVRDEVPR 399
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig9.17030.1 vs. uniprot
Match: D7G1F7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1F7_ECTSI)

HSP 1 Score: 519 bits (1336), Expect = 8.510e-183
Identity = 294/315 (93.33%), Postives = 298/315 (94.60%), Query Frame = 0 
Query:   86 MDNKLIMEYVMELRSRKALLLSSLEETGGVITDDIYPIMEELALVNPSSGCGVGKDLGKSHYCAMLPGHWIAASTIVPNVPFVHGDGEKATNRSPSSRGAGPTCTLGELMSSISGRPVSGGELEYNADTPVRPLRARISALTNTVKDGEMPTVVAVAGFSPAAEAQPVKATGSEAGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--GAGVRSEGFGRVADVVLTEDGAVRGRGKWGVRGGYHLRWEFNTMNLDLGGDKIVKAGAQDGDGGRDLYEFFLDQNMLIVAWKDAPKKEDAVVFVRDEVPR 398
            MDNKLIMEYVMELRSRKALLLSSLEETGGVITDDIYPIMEELALVNPSSGCGVGKDLGKSHYCAMLPGHWIAASTIVPNVPFV+GDGEKATNRSPSSRGAGPTCTLGEL+SSISGRPVSGGELEYNADTPVRPLRARISALTNTVKDGEMPTVVAVAGFSPAAEAQPVKATGS AG  XXXXXXXXXX         XXXXXXXXXXXXXXXX  GAGVR+EGFGRVADVVLTEDGAVRGRGKWGV GGYHLRWEFNTMNLDLGGDKIVKAG + GDGGRDLYEFFLDQNMLIVAWKDAPKKEDAVVFVRDEVPR
Sbjct:    1 MDNKLIMEYVMELRSRKALLLSSLEETGGVITDDIYPIMEELALVNPSSGCGVGKDLGKSHYCAMLPGHWIAASTIVPNVPFVYGDGEKATNRSPSSRGAGPTCTLGELVSSISGRPVSGGELEYNADTPVRPLRARISALTNTVKDGEMPTVVAVAGFSPAAEAQPVKATGSAAGXXXXXXXXXXXXKDAQAKALAXXXXXXXXXXXXXXXXXXGAGVRAEGFGRVADVVLTEDGAVRGRGKWGVTGGYHLRWEFNTMNLDLGGDKIVKAGGEGGDGGRDLYEFFLDQNMLIVAWKDAPKKEDAVVFVRDEVPR 315
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig9.17030.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KXU8_9PHAE1.210e-22891.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1F7_ECTSI8.510e-18393.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..398
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.653

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig9contigE-siliculosus-1a_M_contig9:1275317..1278497 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig9.17030.1mRNA_E-siliculosus-1a_M_contig9.17030.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig9 1275215..1279475 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig9.17030.1 ID=prot_E-siliculosus-1a_M_contig9.17030.1|Name=mRNA_E-siliculosus-1a_M_contig9.17030.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=399bp
MVSPRILAVFCGLDLLQGASAWQPRSLRVPTSTTGQCRAVRDIVAGEHHR
VRKQWSALRSVADGEGAGGAGRPDLASMKRAFEGTMDNKLIMEYVMELRS
RKALLLSSLEETGGVITDDIYPIMEELALVNPSSGCGVGKDLGKSHYCAM
LPGHWIAASTIVPNVPFVHGDGEKATNRSPSSRGAGPTCTLGELMSSISG
RPVSGGELEYNADTPVRPLRARISALTNTVKDGEMPTVVAVAGFSPAAEA
QPVKATGSEAGAAAGGGGQDPKDAQAKALAAAMMEAAAREPRAAAAAGGA
GVRSEGFGRVADVVLTEDGAVRGRGKWGVRGGYHLRWEFNTMNLDLGGDK
IVKAGAQDGDGGRDLYEFFLDQNMLIVAWKDAPKKEDAVVFVRDEVPR*
back to top