prot_E-siliculosus-1a_M_contig9.17026.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig9.17026.1
Unique Nameprot_E-siliculosus-1a_M_contig9.17026.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length1432
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig9.17026.1 vs. uniprot
Match: D7G1G0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1G0_ECTSI)

HSP 1 Score: 1202 bits (3109), Expect = 0.000e+0
Identity = 871/1063 (81.94%), Postives = 886/1063 (83.35%), Query Frame = 0
Query:   46 MRDEYGRLLRTLGADVRARLPKSMETLTHLVWQGGDEGTAQKASDSGVALVSPSWVHACDKGGVHAAEHDHPAAFSPDLYAVVADKKKRQARRKPARRKPTLEPTIDEWQDVDKTGLCFSSSQRDPPDLGLEADDLVGEDGSSSNND-----------------------------RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSAGSRSGKVGDAPLRSRSALPLASPRNTYGSGRFSRRSSEPSAAA-PVRGTAAVRAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---EAATEEVGVDLESTVLADQDRDEEMETGLNDTIVAEDDASDTDTDGETAARAVMAETSDGRPARRYGRCGAAVSGSGGQRDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASPASPGSSEKFSSWKVGGRGLLGRGSAKKTGRLLVTGLGSAGRVGGPARASAPVLASPGLYLEGARRRGGGRXXXXXAGGGVSSPGDTSDVFGMSDGDETERTMLDSTDCDSKAANRGHVSQSEADDSETDDGPADAATDGNSRKLPRRSSIRGAQAGTGXXXXXXKRQSRVSPGPSPRLDPKGVGGSGNGGITTPVNGTRRRGCSAKNPMGEPESAVRGSGGAAGGRGATTPASGYAADLSAGTARVSKARARTGPAAGGXXXXXXXXXXRRSRAGKGAGDHPKEPVEGGAEGEAQDGWSCGKCTFLNELAARKCVMCQSAAPRAPRRPPRSRGTRNGTDPAARSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERGLSSAAAAXXXXXXXXXXXXXXXXXXXXXXXSAKSTRGPPPLAAPVFNRQSCPKVGTDSAGIDRGVEPSPASGDSHGKHQQGLLQGSGGIGGATPPGGDAPPHPRPAASLAGLASPGTSLFRRAAAGAAPGSGVVDRVCGVGSSSHGKASGGDXXXXXXXXSLATGEKVVGGRRRGRDAGVKGGRAAXXXXTVNTTPGGGQGAGVVSLPRPCDEEGGSTAPAIRLFEAVPSPSISLLGRPPP 1075
            MRDEY RLLRTLGADVRARLPKSMETLTHLVWQGGDEGTAQKASD+GVALVSPSWVH CDKGGVHAAEHDHPAAFSPDLYAVVADKKKR+ARRKPARRKPTLEPTIDEWQDVDKTGLCFSSSQRDPPDLGLEADDLVGED SSS+N                               XXXXXX XXXXXXXXXXXXXXXXX                XXXX  SAGSRSGK+GDAPLRSRSALPLASPRNTYGSGRFSRRSSEPSAAA PV+GTA     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   EA TEEVGVDLESTVLADQ  D             +DDAS+TDTD ETAARAVMAETS GRPA R GRCGAAVSG GGQ  A                 XXXXXXXXXXXXXXXXXXX   ASPASPGSSEKFSSWKVGGRGLLGRGSAKK GRLLVTGLGSAGRVGGPARASAPVLASPGLYL+GARR GGGR     AG GVSSPGDTSDVFGMSDGDETERTMLDSTDCDSKAANRGHVSQSEADDSETDDGPADAAT G+ RKL RRSSIRG Q G GXXXXXX RQSRVSPGPSPRL PKGVGGSG GGITTPV+GTRRRGCSAKNPM EPESAVRGSGGAAGGRG TTPASGYAADLSAGT+RVSKARARTGPAA  XXXXXXXXX RRSRAGKGAGDHPKEPVEGGAEGEAQDGWSCGKCTFLNELAARKCVMCQSAAPRA RRPPR+RGTRNGTDPAARSE    XXXXXXXXXXXXXXXXXXXXXXXXXXXXX   ERGLSSAAAA XXXXXXXXXXXXXXXXXXXXXXSAKSTRGPPPLAAPV NR+ CPKVGTDSAGIDR VEPS ASG SHGKHQQGLLQG+GGIGGATPPGGDAP HP  AASL GLASPGTSLFRRAAAGA PGS VVDR  GV SSSHG A  GD         LATGEKVVGGRR             XXXXT+NTTPGGGQGAGVVSLPRPCDEE GSTAPAIRLFEAVPSPS SLLGRPPP
Sbjct:    1 MRDEYRRLLRTLGADVRARLPKSMETLTHLVWQGGDEGTAQKASDAGVALVSPSWVHVCDKGGVHAAEHDHPAAFSPDLYAVVADKKKRKARRKPARRKPTLEPTIDEWQDVDKTGLCFSSSQRDPPDLGLEADDLVGEDRSSSHNSGRGEAAAKAKRXXXXXXXXXXXXXXXXXXXXXXXXXPXXXXXXXXXXXXXXXXXATEGRDAPSYVRDGGGXXXXXXSAGSRSGKIGDAPLRSRSALPLASPRNTYGSGRFSRRSSEPSAAAAPVKGTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAPTEEVGVDLESTVLADQGPDXXXXXXXXXXXXXDDDASNTDTDSETAARAVMAETSAGRPAGRSGRCGAAVSGGGGQCPAGDHDESRCDQQGPRPSSXXXXXXXXXXXXXXXXXXXD--ASPASPGSSEKFSSWKVGGRGLLGRGSAKKNGRLLVTGLGSAGRVGGPARASAPVLASPGLYLDGARRGGGGRARSSRAGVGVSSPGDTSDVFGMSDGDETERTMLDSTDCDSKAANRGHVSQSEADDSETDDGPADAATGGSYRKLSRRSSIRGPQTGAGXXXXXXXRQSRVSPGPSPRLAPKGVGGSGTGGITTPVSGTRRRGCSAKNPMREPESAVRGSGGAAGGRGTTTPASGYAADLSAGTSRVSKARARTGPAA--XXXXXXXXXGRRSRAGKGAGDHPKEPVEGGAEGEAQDGWSCGKCTFLNELAARKCVMCQSAAPRASRRPPRARGTRNGTDPAARSERGMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---ERGLSSAAAAAXXXXXXXXXXXXXXXXXXXXXXSAKSTRGPPPLAAPVSNRKLCPKVGTDSAGIDRDVEPSRASGGSHGKHQQGLLQGNGGIGGATPPGGDAPHHPPVAASLPGLASPGTSLFRRAAAGAVPGSSVVDRAGGVASSSHGNAGAGDTGGDSGGRRLATGEKVVGGRRGXXXXXXX---XXXXXXTLNTTPGGGQGAGVVSLPRPCDEEEGSTAPAIRLFEAVPSPSTSLLGRPPP 1053          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17026.1 vs. uniprot
Match: A0A6H5JHC6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHC6_9PHAE)

HSP 1 Score: 1143 bits (2956), Expect = 0.000e+0
Identity = 833/1073 (77.63%), Postives = 852/1073 (79.40%), Query Frame = 0
Query:   46 MRDEYGRLLRTLGADVRARLPKSMETLTHLVWQGGDEGTAQKASDSGVALVSPSWVHACDKGGVHAAEHDHPAAFSPDLYAVVADKKKRQARRKPARRKPTLEPTIDEWQDVDKTGLCFSSSQRDPPDLGLEADDLVGEDGSSSNNDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------------SGSAGSRSGKVGDAPLRSRSALPLASPRNTYGSGRFSRRSSEPSAAAPVRGTAAVRAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAATEEVGVDLESTVLADQDRDEEMETGLNDTIVAEDD---ASDTDTDGETAARAVMAETSDGRPARRYGRCGAAVSGSGGQRDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASPASPGSSEKFSSWKVGGRGLLGRGSAKKTGRLLVTGLGSAGRVGGPARASAPVLASPGLYLEGARRRGGGRXXXXXAGGGVSSPGDTSDVFGMSDGDETERTMLDSTDCDSKAANRGHVSQSEADDSETDDGPADAATDGNSRKLPRRSS-IRGAQAGTGXXXXXXKRQSRVSPGPSPRLDPKGVGGSGNGGITTPVNGTRRRGCSAKNPMGEPESAVRGSGGAAGGRGATTPASGYAADLSAGTARVSKARARTGPAAGGXXXXXXXXXX--------RRSRAGKGAGDHPKEPVEGGAEGEAQDGWSCGKCTFLNELAARKCVMCQSAAPRAPRRPPRSRGTRNGTDPAARSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERGLSSAAAAXXXXXXXXXXXXXXXXXXXXXXXSAKSTRGPPPLAAPVFNRQSCPKVGTDSAGIDRGVEPSPASGDSHGKHQQGLLQGSGGIGGATPPGGDAPPHPRPAASLAGLASPGTSLFRRAAAGAAPGSGVVDRVCGVGSSSHGKASGGDXXXXXXXXSLATGEKVVGGRRRGRDAGVKGGRAAXXXXTVNTTPGGGQGAGVVSLPRPCDEEGGSTAPAIRLFEAVPSPSISLLGRPPP 1075
            MRDEYGRLLRTLGADVRARLPKSME LTHLVWQGGDEG                         VHAAEHDHPAAFSPDLYA+ ADKKKRQARRKPARRKPTLEPTIDEWQDVDKTGLCFSSSQRDPPDLG EADDLVGED SSSN   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                               S SAGSRSGKVGDAPLRSRSALPLASPRN YG G FSRRSSEPSAAAP +GTAAVR GXXXXXXXXXXXXXXXX               +AAT+EVGVDLESTVLADQD DEEMETGLNDT+V       AS+TD D ETAARA+MAET  GRPA R GRCGAAVS        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ASPASPGSSEKFSSWKVGGRGLLGRGSAKKTGRLLV GLGSAGRVGGPARA+A VLAS GL LEG RR GGGR     AGGGVSSPGDTSDVFGMSDGDETERTMLDSTDCDSKAANRG VSQSEADDSETDDG A+AAT G+SRKL RRSS IRGAQAGT XXXXXX RQSRVSPGPSPRL P GVGGSGNGGITTP++G  RRG SAKNPMGEPE  VRGSGGAAGGRGATTPASGYAADLSAGT RVSKAR RTGPAAG XXXXXXXXXX        +RSRAGKGAGDHPKEPVEGGAEGEAQDGWSCGKCTFLN+LAARKC MC+SAAPRA    PR+RGTRNGTDPAARSE                 XXXXXXXXXXXXXXX    ERGL SAAAA                       SAKSTRGPPPLAAPV NR+SCPKVGTDSAGIDRGV+PSPASGDSHGKHQQGLLQGSGGIGGATPPGGDAPPHP  AASLA LASP TSLFRRAAAGAAPGSGVVDRV GV SSS G+ASG D        SLATGEKVVGGRR G DAGVKGGRAA    T NTTPGGGQ AGV SLPRPCDEE GS APAIRLFEAVPSPSISLLGRPPP
Sbjct:    1 MRDEYGRLLRTLGADVRARLPKSMEILTHLVWQGGDEG-------------------------VHAAEHDHPAAFSPDLYAITADKKKRQARRKPARRKPTLEPTIDEWQDVDKTGLCFSSSQRDPPDLGFEADDLVGEDRSSSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVEGRDAPSFARGXXXXXXXSRSAGSRSGKVGDAPLRSRSALPLASPRNKYGRGHFSRRSSEPSAAAPFKGTAAVRVGXXXXXXXXXXXXXXXXHGWFGEDGADSGGG-DAATKEVGVDLESTVLADQDGDEEMETGLNDTVVXXXXXXXASNTDADSETAARAMMAETRAGRPAGRSGRCGAAVSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDASPASPGSSEKFSSWKVGGRGLLGRGSAKKTGRLLVGGLGSAGRVGGPARAAAQVLASAGLDLEGERRGGGGRARGSRAGGGVSSPGDTSDVFGMSDGDETERTMLDSTDCDSKAANRGLVSQSEADDSETDDGSAEAATGGSSRKLSRRSSSIRGAQAGTXXXXXXXXRQSRVSPGPSPRLAPNGVGGSGNGGITTPLSGMWRRGRSAKNPMGEPEGVVRGSGGAAGGRGATTPASGYAADLSAGTTRVSKARPRTGPAAGXXXXXXXXXXXXXXXXDDGKRSRAGKGAGDHPKEPVEGGAEGEAQDGWSCGKCTFLNDLAARKCAMCRSAAPRAXXXXPRTRGTRNGTDPAARSEREMSSPSPRGGAGIPPAXXXXXXXXXXXXXXXG---ERGLPSAAAAAGDVSSPNGTWEGYEMGRSTASSSAKSTRGPPPLAAPVSNRKSCPKVGTDSAGIDRGVQPSPASGDSHGKHQQGLLQGSGGIGGATPPGGDAPPHPPAAASLAELASPDTSLFRRAAAGAAPGSGVVDRVRGVASSSCGEASGSDAGGDCGGGSLATGEKVVGGRRGGSDAGVKGGRAAAASATANTTPGGGQRAGVGSLPRPCDEEEGSAAPAIRLFEAVPSPSISLLGRPPP 1044          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig9.17026.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G1G0_ECTSI0.000e+081.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JHC6_9PHAE0.000e+077.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001876Zinc finger, RanBP2-typeSMARTSM00547zf_4coord: 746..770
e-value: 1.8E-5
score: 34.2
IPR001876Zinc finger, RanBP2-typePROSITEPS01358ZF_RANBP2_1coord: 748..767
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 740..773
score: 8.784
IPR001357BRCT domainSMARTSM00292BRCT_7coord: 26..108
e-value: 6.1E-6
score: 35.7
IPR001357BRCT domainPFAMPF12738PTCB-BRCTcoord: 32..100
e-value: 4.6E-5
score: 23.3
IPR001357BRCT domainPROSITEPS50172BRCTcoord: 24..104
score: 12.533
NoneNo IPR availableGENE3D2.20.28.140coord: 740..795
e-value: 3.5E-7
score: 31.8
IPR036420BRCT domain superfamilyGENE3D3.40.50.10190coord: 23..122
e-value: 1.4E-14
score: 55.9
IPR036420BRCT domain superfamilySUPERFAMILY52113BRCT domaincoord: 28..117
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 744..769

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig9contigE-siliculosus-1a_M_contig9:1217006..1229116 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig9.17026.1mRNA_E-siliculosus-1a_M_contig9.17026.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig9 1216741..1235139 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig9.17026.1 ID=prot_E-siliculosus-1a_M_contig9.17026.1|Name=mRNA_E-siliculosus-1a_M_contig9.17026.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=1432bp
MASTSGRSSTGRKTPGVGKSGRRNSSGPLAGLVIYVDAFLDDRSPMRDEY
GRLLRTLGADVRARLPKSMETLTHLVWQGGDEGTAQKASDSGVALVSPSW
VHACDKGGVHAAEHDHPAAFSPDLYAVVADKKKRQARRKPARRKPTLEPT
IDEWQDVDKTGLCFSSSQRDPPDLGLEADDLVGEDGSSSNNDRGDAAAKA
KRKASSKRSNHASSSSSSSSASRSKVSEPRDDGGGGGSGSAGSRSGKVGD
APLRSRSALPLASPRNTYGSGRFSRRSSEPSAAAPVRGTAAVRAGGGGDG
EEEVVEEDDDDGHDWFGEDGAAGGGGEAATEEVGVDLESTVLADQDRDEE
METGLNDTIVAEDDASDTDTDGETAARAVMAETSDGRPARRYGRCGAAVS
GSGGQRDAAAGGDDESGGDQQGPRPSSSTAPPPVEENAGAGGAAGGGASP
ASPGSSEKFSSWKVGGRGLLGRGSAKKTGRLLVTGLGSAGRVGGPARASA
PVLASPGLYLEGARRRGGGRARGSRAGGGVSSPGDTSDVFGMSDGDETER
TMLDSTDCDSKAANRGHVSQSEADDSETDDGPADAATDGNSRKLPRRSSI
RGAQAGTGGGGGGGKRQSRVSPGPSPRLDPKGVGGSGNGGITTPVNGTRR
RGCSAKNPMGEPESAVRGSGGAAGGRGATTPASGYAADLSAGTARVSKAR
ARTGPAAGGGGSGGSGDGGRRSRAGKGAGDHPKEPVEGGAEGEAQDGWSC
GKCTFLNELAARKCVMCQSAAPRAPRRPPRSRGTRNGTDPAARSERGMSS
PPPRGGAGIPPAEGAGGAGGAASSGGRGAGGERGLSSAAAAAGDISSPNG
TWEGYEMGRSTASSSAKSTRGPPPLAAPVFNRQSCPKVGTDSAGIDRGVE
PSPASGDSHGKHQQGLLQGSGGIGGATPPGGDAPPHPRPAASLAGLASPG
TSLFRRAAAGAAPGSGVVDRVCGVGSSSHGKASGGDAGGDSGGGSLATGE
KVVGGRRRGRDAGVKGGRAAAAAATVNTTPGGGQGAGVVSLPRPCDEEGG
STAPAIRLFEAVPSPSISLLGRPPPDAAGGGGGRERRRLGRGRARVWLAL
WLTGQGCEMPHAAAMTVGVIPRPAASGMGMKRQGKGRRVGWGWRRRWGYT
PGGRTTTAQKSRTRKLCRGVVTTAAPPKKAGPRLMTLGRMLPPVGKPCWS
VLWRRRRKRRRRRTRPQVARRLRPRRLSLAPPKARRRVSVLLRLPMSGSD
LLRLRWVPAEQKELAGAASARGGAPPGFGTGAWEAGLGSREGGRMEGPLV
LLPRCRGRDKRRRTVVLPGRRWPRPAFTGRGEGAGETPCGKMPRPRQLHR
RRRRRIPFLWRTRPRQGEQEASGGPALAAGLPLPLPLLHRRCRQGEDEAS
GGLALAELALLVPLRRPGGVLRLQGREWLLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036443Znf_RanBP2_sf
IPR036420BRCT_dom_sf
IPR001357BRCT_dom
IPR001876Znf_RanBP2