prot_E-siliculosus-1a_M_contig9.16988.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig9.16988.1
Unique Nameprot_E-siliculosus-1a_M_contig9.16988.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length193
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig9.16988.1 vs. uniprot
Match: D7G1K7_ECTSI (Similar to deubiquitinating enzyme 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1K7_ECTSI)

HSP 1 Score: 387 bits (995), Expect = 2.600e-136
Identity = 181/192 (94.27%), Postives = 186/192 (96.88%), Query Frame = 0 
Query:    1 MDCGDFVHAGCRNDGCNPVVQLRFPGVLPVEPLKVDYTSARDVSELEEDFAELMKSIEDWEGCASHACPAFYHTEEKKTLQLGTSPQSLLVPIFRNVTGSKITRDVTFPLDDLELITTEAGGTPTTTHYMAVAVMQHWGPYCASGHNVTLVRKDSNAGSEWWLCNDEDILSVSSACVTRNAVAVLYRRVPDS 192
            MDCGDFVHAGC NDGCNP+VQLRFPGVLPVEPLKVDYTSARDV+ELEEDF ELM+ IEDWEGCASHACPAFYH EEKKTLQLGTSPQSLLVPIFRNVTGSKITRDVTFPLDDLELITTEAGGTPTTTHYMAVAVMQHWGP+C SGHNVTLVRKDSNAGS+WWLCNDEDILSVSSACV RNAVAVLYRRVPDS
Sbjct:    1 MDCGDFVHAGCHNDGCNPIVQLRFPGVLPVEPLKVDYTSARDVAELEEDFGELMQGIEDWEGCASHACPAFYHAEEKKTLQLGTSPQSLLVPIFRNVTGSKITRDVTFPLDDLELITTEAGGTPTTTHYMAVAVMQHWGPHCTSGHNVTLVRKDSNAGSDWWLCNDEDILSVSSACVARNAVAVLYRRVPDS 192
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BLAST of mRNA_E-siliculosus-1a_M_contig9.16988.1 vs. uniprot
Match: D7G1K0_ECTSI (USP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1K0_ECTSI)

HSP 1 Score: 378 bits (970), Expect = 4.030e-118
Identity = 182/207 (87.92%), Postives = 187/207 (90.34%), Query Frame = 0 
Query:    1 MDCGDFVHAGCRNDGCNPVVQLRFPGVLPVEPLKVDYTSARDVSELEEDFAELMK---------------SIEDWEGCASHACPAFYHTEEKKTLQLGTSPQSLLVPIFRNVTGSKITRDVTFPLDDLELITTEAGGTPTTTHYMAVAVMQHWGPYCASGHNVTLVRKDSNAGSEWWLCNDEDILSVSSACVTRNAVAVLYRRVPDS 192
            MDCGDFVHAGC NDGCNP+VQLRFPGVLPVEPLKVDYTSARDV+ELEEDF ELM+               +IEDWEGCASHACPAFYHTEEKKTLQLGTSPQSLLVPIFRNVTGSKITRDVTFPLDDLELITTEA GTPTTTHYMAVAVMQHWGP+C SGHNVTLVRKDSNAGSEWWLCNDEDILSVSSACV RNAVAVLYRRVPDS
Sbjct: 1719 MDCGDFVHAGCHNDGCNPIVQLRFPGVLPVEPLKVDYTSARDVAELEEDFGELMQGVKDSGKTELSFLLNNIEDWEGCASHACPAFYHTEEKKTLQLGTSPQSLLVPIFRNVTGSKITRDVTFPLDDLELITTEAHGTPTTTHYMAVAVMQHWGPHCTSGHNVTLVRKDSNAGSEWWLCNDEDILSVSSACVARNAVAVLYRRVPDS 1925
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BLAST of mRNA_E-siliculosus-1a_M_contig9.16988.1 vs. uniprot
Match: A0A6H5K8G9_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8G9_9PHAE)

HSP 1 Score: 283 bits (723), Expect = 8.490e-85
Identity = 144/196 (73.47%), Postives = 154/196 (78.57%), Query Frame = 0 
Query:    1 MDCGDFVHAGCRNDGCNPVVQLRFPGVLPVEPLKVDYTSARDVSELEEDFAELMKSIEDWEGCASHACPAFYHTEEKKTLQLGTSPQSLLVPIFRNV----TGSKITRDVTFPLDDLELITTEAGGTPTTTHYMAVAVMQHWGPYCASGHNVTLVRKDSNAGSEWWLCNDEDILSVSSACVTRNAVAVLYRRVPDS 192
            MDCGDFV AGC NDGCN VV+LRFPGVLPVEPLKVDYTSARDV+ELEEDF ELM+S++D                       G +  S L+   R++    T SKITRDVTFPLDDLEL+TTEA GTPTTTHYMAVAVMQHWGPYC SGHNVTLVRKDS AGSEWWLCNDEDILSVSSACVTRNAVAVLYRRVPDS
Sbjct: 1463 MDCGDFVFAGCHNDGCNHVVELRFPGVLPVEPLKVDYTSARDVAELEEDFGELMESVKD----------------------SGKTELSFLLNNVRSLSPCLTTSKITRDVTFPLDDLELLTTEADGTPTTTHYMAVAVMQHWGPYCTSGHNVTLVRKDSKAGSEWWLCNDEDILSVSSACVTRNAVAVLYRRVPDS 1636
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BLAST of mRNA_E-siliculosus-1a_M_contig9.16988.1 vs. uniprot
Match: D7G1K1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1K1_ECTSI)

HSP 1 Score: 56.2 bits (134), Expect = 1.380e-6
Identity = 28/48 (58.33%), Postives = 33/48 (68.75%), Query Frame = 0 
Query:   41 RDVSELEEDFA---ELMKSIEDWEGCASHACPAFYHTEEKKTLQLGTS 85
            R + EL+ D      ++  IEDWE CASHA P +Y TEEKKTLQLGTS
Sbjct:   46 RTLEELQNDLLLQLAMVLKIEDWERCASHASPGYYPTEEKKTLQLGTS 93
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig9.16988.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G1K7_ECTSI2.600e-13694.27Similar to deubiquitinating enzyme 3 n=1 Tax=Ectoc... [more]
D7G1K0_ECTSI4.030e-11887.92USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K8G9_9PHAE8.490e-8573.47USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G1K1_ECTSI1.380e-658.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.70.10coord: 16..190
e-value: 1.0E-13
score: 53.4
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 71..181
e-value: 1.7E-7
score: 31.0
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 1..189
score: 12.279
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 43..189

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig9contigE-siliculosus-1a_M_contig9:741329..744544 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig9.16988.1mRNA_E-siliculosus-1a_M_contig9.16988.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig9 741329..744544 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig9.16988.1 ID=prot_E-siliculosus-1a_M_contig9.16988.1|Name=mRNA_E-siliculosus-1a_M_contig9.16988.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=193bp
MDCGDFVHAGCRNDGCNPVVQLRFPGVLPVEPLKVDYTSARDVSELEEDF
AELMKSIEDWEGCASHACPAFYHTEEKKTLQLGTSPQSLLVPIFRNVTGS
KITRDVTFPLDDLELITTEAGGTPTTTHYMAVAVMQHWGPYCASGHNVTL
VRKDSNAGSEWWLCNDEDILSVSSACVTRNAVAVLYRRVPDS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038765Papain-like_cys_pep_sf
IPR028889USP_dom
IPR001394Peptidase_C19_UCH