prot_E-siliculosus-1a_M_contig9.16976.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig9.16976.1
Unique Nameprot_E-siliculosus-1a_M_contig9.16976.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length916
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig9.16976.1 vs. uniprot
Match: D7G0M4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0M4_ECTSI)

HSP 1 Score: 505 bits (1300), Expect = 2.870e-162
Identity = 802/850 (94.35%), Postives = 806/850 (94.82%), Query Frame = 0 
Query:   70 MRVSAGGHSRRNSRAGSTSATRPNGTESVGGGAQVRRRRGTDNPHSRLFVKKVKAMESSGDWKAVLRELDAAEGRAAATXXXXXXXXXXXAVAPRAEPMTVYMYTACITTMSKCKRWREALEVLDRMMAAXXXXXXXGELTPNVNTMSAXXXXXXXXXXXXXXXXXXXXXKTIGDEAGGLKPDXXXXXXXXXXXXXXXXXXXXXXXXDDLRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREDPDVPVDVASFNXXXXXXXXXXXXXXXXXXXXEITTEGLAPGLVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISMLRVGXXXXXXXXXXXXXXXXXXXXXXXXXRFLREMPQAGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEATSSPSSPSSSPWXXXXXXXXXXXXXXXXXXXXXXXXXXXRNVRGPARSARLGRVPAAAAPVSGRXXXXXXXXXXXXXXXXS---REAETGRHFYCRPNVVTFNAAMQAAGSAGEWREALTLLRGMLAEKIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMEADVGLETPSSSTTTTTPRPDVTTXXXXXXXXXXXXXXXXXXXXXXXMPTVGIAPSRISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISGSGGG-VVRXXXXXXXXXXXXXXXXXXXXXXXXXRAEATSLGLLPVGESGDAAGVSSGLTVDANEGEVVTTRFPVTPAEIASGSFAKPSGGKLRRSAGVEAAAGESTTPV 915
            M VSAGG+SRR+SRAGSTSA RPNGTESVGGGAQVRRRRGTDNPHSRLFVKKVKAMESSGDWKAVLRELDAAEGRAAAT XXXXXXX   AVAPRAEPMTVYMYTACITTMSKCKRWREALEVLDRMMAA       GELTPNVNTMSAXXXXXXXXXXXXXXXXXXXXXKTIGDEAGGLKPDXXXXXXXXXXXXXXXXXXXXXXXXDDLRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREDPDVPVDVASFNXXXXXXXXXXXXXXXXXXXXEITTEGLAPGLVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISMLRVGXXXXXXXXXXXXXXXXXXXXXXXXXRFLREMPQAGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  ATSSP+S   SPWXXXXXXXXXXXXXXXXXXXXXXXXXXX NV GPA SAR GRVPAAAAPV   XXXXXXXXXXXXXXXX    REAETGR FYCRPNV TFNAAMQAAGSAGEWREALTLLRGMLAEKIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMEADVGLE PSSSTT TT RPDVTTXXXXXXXXXXXXXXXXXXXXXXX PTVGI PS ISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISGSGGG  VRXXXXXXXXXXXXXXXXXXXXXXXXX AEA SLGLLP GESGDAAG+SSGLTVDANEGEVVTTRFPVTPAEIASGSFAKPS GKLRR AGVEAAAGESTTPV
Sbjct:    1 MSVSAGGYSRRSSRAGSTSAARPNGTESVGGGAQVRRRRGTDNPHSRLFVKKVKAMESSGDWKAVLRELDAAEGRAAATAXXXXXXXA--AVAPRAEPMTVYMYTACITTMSKCKRWREALEVLDRMMAAAQEEGGGGELTPNVNTMSAXXXXXXXXXXXXXXXXXXXXXKTIGDEAGGLKPDXXXXXXXXXXXXXXXXXXXXXXXXDDLRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREDPDVPVDVASFNXXXXXXXXXXXXXXXXXXXXEITTEGLAPGLVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISMLRVGXXXXXXXXXXXXXXXXXXXXXXXXXRFLREMPQAGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATSSPTS---SPWXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVEGPAISARSGRVPAAAAPVXXXXXXXXXXXXXXXXXXXXXXXREAETGRFFYCRPNVATFNAAMQAAGSAGEWREALTLLRGMLAEKIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMEADVGLEIPSSSTTRTTSRPDVTTXXXXXXXXXXXXXXXXXXXXXXXXPTVGITPSGISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISGSGGGDAVRXXXXXXXXXXXXXXXXXXXXXXXXXXAEAASLGLLPAGESGDAAGLSSGLTVDANEGEVVTTRFPVTPAEIASGSFAKPSRGKLRRPAGVEAAAGESTTPV 845
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig9.16976.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G0M4_ECTSI2.870e-16294.35Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 183..203
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 283..420
coord: 706..847
coord: 170..308
coord: 587..689
coord: 402..495
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 765..824
e-value: 0.011
score: 15.8
coord: 706..755
e-value: 8.0E-9
score: 35.5
coord: 345..405
e-value: 2.6E-4
score: 21.0
coord: 274..335
e-value: 2.3E-5
score: 24.3
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 326..357
e-value: 7.9E-4
score: 17.4
coord: 171..199
e-value: 8.4E-4
score: 17.4
coord: 467..499
e-value: 2.7E-4
score: 18.9
coord: 664..690
e-value: 8.0E-6
score: 23.7
coord: 711..743
e-value: 5.9E-5
score: 21.0
coord: 257..287
e-value: 9.9E-4
score: 17.1
coord: 592..626
e-value: 3.2E-5
score: 21.8
coord: 432..466
e-value: 6.5E-8
score: 30.3
coord: 396..430
e-value: 5.4E-5
score: 21.1
coord: 745..779
e-value: 1.2E-6
score: 26.3
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 215..243
e-value: 0.0012
score: 18.9
coord: 171..197
e-value: 0.024
score: 14.9
coord: 663..688
e-value: 8.8E-5
score: 22.5
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 429..478
e-value: 1.5E-9
score: 37.9
coord: 589..636
e-value: 3.7E-7
score: 30.2
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 816..850
score: 8.221
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 430..464
score: 12.967
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 323..357
score: 10.753
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 358..392
score: 8.177
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 708..742
score: 11.159
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 393..429
score: 10.38
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 660..690
score: 9.186
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 169..203
score: 8.177
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 778..812
score: 8.55
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 252..286
score: 9.219
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 743..777
score: 11.553
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 212..246
score: 9.186
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 625..659
score: 7.837
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 465..499
score: 11.027
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 590..624
score: 10.15
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 287..321
score: 8.659
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 705..866
e-value: 4.8E-34
score: 120.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 579..704
e-value: 2.1E-24
score: 88.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 404..506
e-value: 1.1E-28
score: 101.8
coord: 300..403
e-value: 2.1E-25
score: 91.1
coord: 144..299
e-value: 2.9E-27
score: 97.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 162..799

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig9contigE-siliculosus-1a_M_contig9:586030..591469 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig9.16976.1mRNA_E-siliculosus-1a_M_contig9.16976.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig9 586030..592135 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig9.16976.1 ID=prot_E-siliculosus-1a_M_contig9.16976.1|Name=mRNA_E-siliculosus-1a_M_contig9.16976.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=916bp
MAFVSLPTARFDPWAGFLGIVRPRAPWYHNGVGSATPRPRGGGSALGGCA
TCGATTPDSSSGSQRALSLMRVSAGGHSRRNSRAGSTSATRPNGTESVGG
GAQVRRRRGTDNPHSRLFVKKVKAMESSGDWKAVLRELDAAEGRAAATAA
AAAAASTSAAVAPRAEPMTVYMYTACITTMSKCKRWREALEVLDRMMAAE
EEEGGGGELTPNVNTMSAVITACGRCGQGKAALEVLERMKTIGDEAGGLK
PDLHCLSAAIDAAGGAGEWEAALRVLDDLRAAGIKPDGFVYRAAITACGN
GDKLEMALQLLRDMREDPDVPVDVASFNAAITACGRCKQWQKAISLLREI
TTEGLAPGLVSYGAAITACATCKQGDAAVELLRELPIVGITPDSMVYTSA
ISACGRAGQWERAVGLFREISMLRVGFRPDAVSYSAVITALGEGGQWEEA
LRFLREMPQAGVEPDVVCFNSAVTACAKSGRWEEAGGLLREMLEATSSPS
SPSSSPWWSSSGAPRTGEAGGGPAAAAAAGAARRRNVRGPARSARLGRVP
AAAAPVSGRRRGGDGGGNSGGGGSSSREAETGRHFYCRPNVVTFNAAMQA
AGSAGEWREALTLLRGMLAEKIAPNATSYTSTIAACGFAGEWEQALNLLR
ALKKGEGKLGVGAYNAAIKACGEAGRFEEAVGVLREMEADVGLETPSSST
TTTTPRPDVTTYTAAIAACGRAGEYRRAVLLLREMPTVGIAPSRISYNAA
MTACGRSGQWELSLSLLREMAKLGVSPDVVSYNSVMSAQGAAGEWERAVG
LLGEISGSGGGVVRPDCVSFATAIRACEMAGRLDDAAGLRAEATSLGLLP
VGESGDAAGVSSGLTVDANEGEVVTTRFPVTPAEIASGSFAKPSGGKLRR
SAGVEAAAGESTTPV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat