prot_E-siliculosus-1a_M_contig9.16975.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig9.16975.1
Unique Nameprot_E-siliculosus-1a_M_contig9.16975.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length1548
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig9.16975.1 vs. uniprot
Match: D7G0M6_ECTSI (Nucleoporin_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0M6_ECTSI)

HSP 1 Score: 2422 bits (6277), Expect = 0.000e+0
Identity = 1416/1561 (90.71%), Postives = 1436/1561 (91.99%), Query Frame = 0
Query:    1 MPAAAEEDHDPFGVLRNANTVLLHNLRRDELSPELQKQLTATGMASTSQAYFCDPYTNSYLGPQIQPKSFAMLPEALSRERDRVECMTFMGLLPEIDHSWMTVDNVLYLWNYHTQDFTQFRELEQVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHEKPQETGSPRNRRIQVRRTNFRASTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGSPVPSRQCSRLAHKSSSGGPGPVNSMFALLGLRRAERVLVDVVVDPLRNVLYTLDLAGDVDLFDLGADGNSTTQKAWFNNVFNIWTRAARFCQGYGNGQSGLSHLTFKDPKQHQIVSLGVVPATESKTVALVAVTDSGMRIYLSCGSSGGKRHNFRLTIVQIRCPPPEKLWQYLHQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMFQPADGFPARWERQPPSVYGAYCCGGVTVLAQALTQGDRLVLIGSDLITRAKRKREMHQEEHPSMREAVTEMGDSAAAGAGGRQQQAMGRVWAISERPVALADNPEIGRVRALLSLSGAPSPSDNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVRGGRSTSGAVVGGVVSRAKAWQRSNRYASRPVAPSPPLVASPGGSAGFPGGLNARDVGGMVQLPELGVQPYSDRRELLCLTGAGLQVLTRLRPVDLLYDLLARNHVEGVRLFFDDFSPDQSAAMCFSIACGLPRDLGTGSGXXXXXXXPVAGSTGXGGCNPSVSKAYGVPSHTVRARALDAALMICKPPGFSSPGQPAGAXXXXXXX--GGVAATAGGVIMGEKFTNSALHNGLQLFIGRLLRPFWFLPVVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVRDLEALRVPLESLRASIRAVFPRAVGEDLAALASREAKAAAAMPASGGLIGNGGADARRGAELLAEAAREWRGERALGADGQLARACAALTAVGRLEAVVDVCMTCAKNFGEGVVVSGXXXXXXXXXVEAWEEGVYQGGGIVGAEQREKARLECYKGVLEAVLGLLKQEQQQLRSA-AAAGQGGVRGSKKVDSLIARCLSYKAPLLEEMLFGVLEEHDKKLLMSIRTPGVEQYLKRDPEDLFRHYMLSKEYPKAVHLMDCEARVEARSGVHVRHRVECLLKAISACHKCDLDSAQMVAPGWSLNHAKLRTMEDERDVLLVQERLLSDLKATMAPLERLAQEGRGTEGLIAELAERRRIAETWTTDVVDPSELYRQASGSFLWEGCLRLMQCCEFDEPIVAKRLIRS-----IIWREVPSVSRGGSKCRAQVFISAMRDRPGEVEVDDVRQELDRGLLRGGGGDGGTRAGRRIAF-----EDDGWFTPLL-DKMSVLSQDLLAHKASFVLSVETLCLELQMIADEFHEAGGSASALCVVEAVGRAGLSAVALLDAYEYLNQHHYPSDDHARLRRFAVMARLLELAAAGGDGNKAAAGGVGLVSETVRPERLERLAHDTLAGLDSLRFSSSSAAAAGGEDADRDAGARELVEEVRRKVDKLVRSPRFPRNGSSISRPYF 1547
            MPA AEEDHDPFGVLRNANTVLLHNLRRDELSPELQKQLTATGMASTSQAYFCDPYTNSYL PQIQPKSFAMLPEALSRERDRVECMTFMGLLPEIDH+WMTVDNVLYLWNYHTQDFTQFRELEQVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHEKPQETGSPRNRRIQVRRTNFRASTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGSPVPSRQCSRLAHKSSSGGPGPVNSMFALLGLRRAERVLV+VVVDPLRNVLYTLDLAGDVDLFDLGADGNSTTQK   NNVFNIW RAARFCQGYGNGQSGLSHLTFKDPKQHQIVSLGVVPATESKTVALVAVTDSGMRIYLSCGSSGGKRHNFRLTIVQIRCPPPEKLWQYLHQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMFQPADGFPA+WERQPPSVYGAYCCGGVTVLAQAL QGDRLVLIGSDLITRAKRKREM QEEHPSMREAVTEMGDSA     GRQQQAMGRVWAISERPV LADNPEIGRVRALL+LSGAPSPSDNNXXXXXXXXXXXXXXXXXXXXXXX       AVVRGGRSTSGAVVGGVVSRAKAWQRS+RYASRPVAPSPPLVASPGGSAGFPGGLNARDVGGMVQLPELGVQPYSDRRELLCLTGAGLQVLTRLRPVDLLYDLLARNHVEGV LFF+DFSPDQSAAMCFSIACGLPRDLGTGSGXXXXXX PVAGST X  CNPSV  A GVPSHTVRARALDAALMICKPPGFSSPGQPAG   XXXXX  GGVAATAGGVIMGEKFTNSALHNGLQLFIGRLLRPFWFLPVVVXXXXXXXXXXXXXXXXXXXXXXXXXXXX   FVRDLEALRVPLESLRASIRAVFPRAVGEDLAALA   A A A              DAR GAELLAEAAREWRGERALGADGQLARACAALTAVGRLEAVVDVCMTCAKNFGEGVV SGXXXXXXXXXVEAWEEGVYQGGGIVGAEQREKARLECYK VLEAV+GLLKQEQQQLRSA AAAGQGGVRGSKKVDSLIARCLSYKAPLLEEMLFGVLEEHDKKLLMSIRTPGVE+YLKRDPEDLFRHYMLSKEYPKAVHLMDCEARVEARSGVHVRHRVECLLKAISACHKCDLDSAQMVAPGWSLNHAKLRTMEDERDVLLVQERLLSDLKATM PLERLAQEGRGTEGL+AELAERRRIAETWTTD+VDPSELYRQASGSFLWEGCLRLMQCCEFDEPIVAK+LIR       ++  V     GG  C   V I  +           V       LL   G D   R GR  +F     +  G   PLL DKMSVLSQ+LL+HKASFVLSVETLCLELQMIADEFHEAGGSASALCVVEAVGRAGLSAV LLDAYEYLNQHHYPSDDHARLRRFAVMARLLELAAAGGDG KAAAGGVGLVSETVRPERLERLAHDTLAGLDSLRFSSSSAA+AGGEDADRDAGAREL+EEVRRKVDKLVRSPRFPRNGSSISR YF
Sbjct:    1 MPAVAEEDHDPFGVLRNANTVLLHNLRRDELSPELQKQLTATGMASTSQAYFCDPYTNSYLAPQIQPKSFAMLPEALSRERDRVECMTFMGLLPEIDHAWMTVDNVLYLWNYHTQDFTQFRELEQVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHEKPQETGSPRNRRIQVRRTNFRASTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGSPVPSRQCSRLAHKSSSGGPGPVNSMFALLGLRRAERVLVEVVVDPLRNVLYTLDLAGDVDLFDLGADGNSTTQK---NNVFNIWIRAARFCQGYGNGQSGLSHLTFKDPKQHQIVSLGVVPATESKTVALVAVTDSGMRIYLSCGSSGGKRHNFRLTIVQIRCPPPEKLWQYLHQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMFQPADGFPAKWERQPPSVYGAYCCGGVTVLAQALAQGDRLVLIGSDLITRAKRKREMRQEEHPSMREAVTEMGDSA-----GRQQQAMGRVWAISERPVTLADNPEIGRVRALLALSGAPSPSDNNXXXXXXXXXXXXXXXXXXXXXXXR------AVVRGGRSTSGAVVGGVVSRAKAWQRSSRYASRPVAPSPPLVASPGGSAGFPGGLNARDVGGMVQLPELGVQPYSDRRELLCLTGAGLQVLTRLRPVDLLYDLLARNHVEGVVLFFNDFSPDQSAAMCFSIACGLPRDLGTGSGXXXXXX-PVAGSTXXXXCNPSVPAANGVPSHTVRARALDAALMICKPPGFSSPGQPAGGGIXXXXXXXGGVAATAGGVIMGEKFTNSALHNGLQLFIGRLLRPFWFLPVVVXXXXXXXXXXXXXXXXXXXXXXXXXXXX---FVRDLEALRVPLESLRASIRAVFPRAVGEDLAALARLTAAAEA--------------DARWGAELLAEAAREWRGERALGADGQLARACAALTAVGRLEAVVDVCMTCAKNFGEGVVASGXXXXXXXXXVEAWEEGVYQGGGIVGAEQREKARLECYKRVLEAVVGLLKQEQQQLRSATAAAGQGGVRGSKKVDSLIARCLSYKAPLLEEMLFGVLEEHDKKLLMSIRTPGVERYLKRDPEDLFRHYMLSKEYPKAVHLMDCEARVEARSGVHVRHRVECLLKAISACHKCDLDSAQMVAPGWSLNHAKLRTMEDERDVLLVQERLLSDLKATMTPLERLAQEGRGTEGLLAELAERRRIAETWTTDIVDPSELYRQASGSFLWEGCLRLMQCCEFDEPIVAKKLIREKGRGGYLYVHV---LLGGGGCGGGVRICLV-----------VWHFYPNPLLNLEGCD---RDGRHKSFFLLGPQRPGDTPPLLEDKMSVLSQELLSHKASFVLSVETLCLELQMIADEFHEAGGSASALCVVEAVGRAGLSAVVLLDAYEYLNQHHYPSDDHARLRRFAVMARLLELAAAGGDGIKAAAGGVGLVSETVRPERLERLAHDTLAGLDSLRFSSSSAASAGGEDADRDAGARELLEEVRRKVDKLVRSPRFPRNGSSISRSYF 1512          
BLAST of mRNA_E-siliculosus-1a_M_contig9.16975.1 vs. uniprot
Match: A0A6H5J909_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J909_9PHAE)

HSP 1 Score: 1295 bits (3350), Expect = 0.000e+0
Identity = 777/1000 (77.70%), Postives = 793/1000 (79.30%), Query Frame = 0
Query:  723 MCFSIACGLPRDLGTGSGXXXXXXXPVAGSTGXGGCNPSVSKAYGVPSHTVRARALDAALMICKPPGFSSPGQPAGAXXXXXXXGGVAATAGGVIMGEKFTNSALHNGLQLFIGRLLRPFWFLPVVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVRDLEALRVPLESLRASIRAVFPRAVGEDLAALASREAKAAAAMPASGGLIGN---------------------------------------------------------------------GGA------------------------------------------------------------------------------------------------------DARRGAELLAEAAREWRGERALGADGQLARACAALTAVGRLEAVVDVCMTCAKNFGEGVVVSGXXXXXXXXXVEAWEEGVYQGGGIVGAEQREKARLECYKGVLEAVLGLLKQEQQQLRSAAAA----GQGGVRGSKKVDSLIARCLSYKAPLLEEMLFGVLEEHDKKLLMSIRTPGVEQYLKRDPEDLFRHYMLSKEYPKAVHLMDCEARVEARSGVHVRHRVECLLKAISACHKCDLDSAQMVAPGWSLNHAKLRTMEDERDVLLVQERLLSDLKATMAPLERLAQEGRGTEGLIAELAERRRIAETWTTDVVDPSELYRQASGSFLWEGCLRLMQCCEFDEPIVAKRLIRSIIWREVPSVSRGGSKCRAQVFISAMRDRPGEVEVDDVRQELDRGLLRGGGGDGGTRAGRRIAFEDDGWFTPLLDKMSVLSQDLLAHKASFVLSVETLCLELQMIADEFHEAGGSASALCVVEAVGRAGLSAVALLDAYEYLNQHHYPSDDHARLRRFAVMARLLELAAAGGDGNKAAAGGVGLVSETVRPERLERLAHDTLAGLDSLRFSSSSAAAAGGEDADRDAGARELVEEVRRKVDKLVRSPRFPRNGSSISRPYF 1547
            MCFSIACGLPRDLGTG G XXXXXXPVAGSTG GG NPSV  AYGVP+HTVRARALDAALMICKPPGFSSPGQPAG      XX  VAATAGGVIMGEKFTNSALHNGLQLFIGRLLRPFWFLPVVVXXXXXXXXXXXXXXXXXXXXXXXXXXXX   FVRDLEALRVPLESLRASIRAVFPRAVGEDLAALASREAKAAAA+PASGGL+GN                                                                     GGA                                                                                                      DARRGAELLAEAAREWRGERALGADGQLARACAALTAVGRLEAVVDVCMTCAKNFGEGVV SGXXXXXXXX +EAWEEGVYQGGGIVGAEQREKARLECYK VLEAV+GLLKQE+QQLRSA       GQGGVRGSKKVDSLIARCLSYKAPLLEEMLFGVLEEHDKKLL+SIRTPGVEQYLKRDPEDLFRHYMLSK+YPKAVHLMD EARVEA SGVHVRHRVECLLKAISACHKCDLDSAQMVAPGWSLNHAKLRTMEDERDVLLVQERLLS+LKATMAPLERLAQEGRGTEGLIAEL+ERRRIAETWTTD+VDPSELYRQASGSFLWEGCLRLMQCCEFDEPIVAKRLIRSIIWREVPSVSRGGSKCRAQVFIS+MRDRPGEVEVDDVRQELDRGL  GGGGDGGTRAGRRIAFEDDGWFTPLLDKMSVLSQ+LLAHKASFVLSVETLCLELQMIADEFHEAGGSASALCVVEAVGRAGLSA+ALLDAYEYLNQHHYPSDDHARLRRFAVMARLLELAAAGGDGNKAA GGVGLVSET+RPERLERLAHDTLAGLDSLRFSSS A AA G+DADRDAGARELVEEVRRKVDKLVRSPRFPRNGS ISRPYF
Sbjct:    1 MCFSIACGLPRDLGTGCGGXXXXXXPVAGSTGGGGYNPSVPTAYGVPNHTVRARALDAALMICKPPGFSSPGQPAGGGIGIGXXXXVAATAGGVIMGEKFTNSALHNGLQLFIGRLLRPFWFLPVVVXXXXXXXXXXXXXXXXXXXXXXXXXXXX---FVRDLEALRVPLESLRASIRAVFPRAVGEDLAALASREAKAAAAVPASGGLLGNXXXXXXXXXXGLVVAPGGYPTPETPQQRNQKALKREALEVHAAYRLVSRAAEAVRMAGVLARAAASSAVGGAAAVDNVPWSSLDGVPLWRLVTGGDEHRRASFLLADLVGATTKGNNNAESRRDYARELGSWCRGFFGAGDRQTFEGVELLRRAAASGXXXXXXXXRLTAAAEADARRGAELLAEAAREWRGERALGADGQLARACAALTAVGRLEAVVDVCMTCAKNFGEGVVASGXXXXXXXXGLEAWEEGVYQGGGIVGAEQREKARLECYKRVLEAVVGLLKQERQQLRSAXXXXXXXGQGGVRGSKKVDSLIARCLSYKAPLLEEMLFGVLEEHDKKLLLSIRTPGVEQYLKRDPEDLFRHYMLSKDYPKAVHLMDREARVEAGSGVHVRHRVECLLKAISACHKCDLDSAQMVAPGWSLNHAKLRTMEDERDVLLVQERLLSELKATMAPLERLAQEGRGTEGLIAELSERRRIAETWTTDIVDPSELYRQASGSFLWEGCLRLMQCCEFDEPIVAKRLIRSIIWREVPSVSRGGSKCRAQVFISSMRDRPGEVEVDDVRQELDRGL-GGGGGDGGTRAGRRIAFEDDGWFTPLLDKMSVLSQELLAHKASFVLSVETLCLELQMIADEFHEAGGSASALCVVEAVGRAGLSALALLDAYEYLNQHHYPSDDHARLRRFAVMARLLELAAAGGDGNKAATGGVGLVSETIRPERLERLAHDTLAGLDSLRFSSS-AGAARGDDADRDAGARELVEEVRRKVDKLVRSPRFPRNGSRISRPYF 995          
BLAST of mRNA_E-siliculosus-1a_M_contig9.16975.1 vs. uniprot
Match: A0A6H5J944_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J944_9PHAE)

HSP 1 Score: 297 bits (760), Expect = 1.040e-88
Identity = 188/212 (88.68%), Postives = 194/212 (91.51%), Query Frame = 0
Query:  505 MREAVTEMGDSAAA-------GAGGRQQQAMGRVWAISERPVALADNPEIGRVRALLSLSGAPSPSDNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVRGGRSTSGAVVGGVVSRAKAWQRSNRYASRPVAPSPPLVASPGGSAGFPGGLNARDVGGMVQLPELGVQPYSDRRELLCLTGAGLQVLTRLRPVDLLYDLLARNHVEGVR 709
            MREAVTE+GDSA+A       GAGGRQQQAMGRVWAISERPV L DNPEIGRVRALL+LSGAPSPSDNNXXXXXXXXXXXXXXXXXXXXXXX       AVVRGGRS SGAVVGGV+SRAKAWQRS+RYASRPVAPSPPLVASPGGSAGFPGGLNARDVGGMVQLPELGVQPYSDRRELLCLTGAGLQVLTRLRPVDLLYDLL R+HVEGVR
Sbjct:    1 MREAVTEIGDSASATDPTAGGGAGGRQQQAMGRVWAISERPVTLVDNPEIGRVRALLALSGAPSPSDNNXXXXXXXXXXXXXXXXXXXXXXXSR-----AVVRGGRSVSGAVVGGVLSRAKAWQRSSRYASRPVAPSPPLVASPGGSAGFPGGLNARDVGGMVQLPELGVQPYSDRRELLCLTGAGLQVLTRLRPVDLLYDLLVRDHVEGVR 207          
BLAST of mRNA_E-siliculosus-1a_M_contig9.16975.1 vs. uniprot
Match: A0A835YRU3_9STRA (Nup133 N terminal like-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRU3_9STRA)

HSP 1 Score: 279 bits (713), Expect = 2.030e-72
Identity = 283/942 (30.04%), Postives = 389/942 (41.30%), Query Frame = 0
Query:   12 FGVLRNANTVLLHNLRRDELSPELQKQLTATGMASTSQAYFCDPYTNSYLGPQIQPKSFAMLPEALSRERDRVECMTFMGLLPEIDHSWMTVDNVLYLWNY--HTQDFTQFRELEQVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHEKPQETGSPRNRRIQVRRTNFRASTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSV--AYGFWYSVFSVGSPVPSRQC---------------------SRLAHKSSSGGPGPVNSMFALLGLRRAERV---------------------LVDVVVDPLRNVLYTLDLAGDVDLFDLGADGNSTTQKAWFNNVFNIWTRAARFCQGYGNG--QSGLSHLTFKDPKQHQIVSLGVVPATESKTVALVAVTDSGMRIYLSCGSSGGKRHNFRLT----IVQIRCPPPEKLWQYLHQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMFQPADGFPARWERQPPSVYG----------AYCCGGVTVLAQ-ALTQGDRLVLIGSDLITRAKRKREMHQEEHPSMREAVTEMGDSAAAGAGGRQQQAMGRVWAISERPVALADNPEIGRVRALLSLSGAPSPSDNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVRGGRSTSGAVVGGVVSRAKAWQRSNRYASRPVAPSPPLVASPGGSAGFPGGLNARDVGGMVQLPELGVQPYSDRRELLCLTGAGLQVLTRLRPVDLLYDLL--ARNHVEGVRLFFDDFSPDQSAAMCFSIACGLPRD--------------------------LGTGS-------GXXXXXXXPVAGSTGXGGCNPSVSKAYGVPSHTVRARALDAALMICKPPGFSSPGQPAGAXXXXXXXGGVAATAGG------VIMGEKFTNSALHNGLQLFIGRLLRPFWFLPVVV 849
            F  L +A+  ++ +L +DE                 +  YFC+P+T   LG  ++ +S   LP  L   + R++  TFMGLLPE++H+W++VDN L LWNY        +F+ELEQVIV V L  P++GVF   V+++L VAT VEV+L+AVT            + R+ VR T F AS+DGV+M  I  HP GR+FMAGKDGNLYEL Y    A G W S   +G    SR+C                     SR A  ++   PGP+  +     ++R  RV                     L+D+ VDPLRN LYT+D  G +  ++LG DG  T          ++W  + +FC+ +     Q       F+     + V+L VV A E   V LV V  SGMR+YL       +    + T    ++ +R PPP  LW++                                   QP  GF A   R                 AY    VTV+AQ A  +G      G  L+   +       +   S+ E   E+ D A            G V AI E P  L D P +  + AL   SG PS  +                                      R+  G                N   +  V P PPL   P    G+ GGL  R   G+V L EL  Q  + +R LLCL+GAGL ++ +LRP+D+L+ LL  A    + ++LFFD +   ++ AMCF+IACGLP D                          L   S                 A +TG G    +  +A   PS   RA A+DA   +     F+  G     XXXXXXX                +  E+F +SA + GL  F+ RLLRP WF PV V
Sbjct:   15 FSALADAHGEVVSHLLQDEAQNTTLYSQLLDNPGGAAHGYFCEPHTADQLGLPLELRSTIPLPAELLDLQQRMQVATFMGLLPELNHAWLSVDNALLLWNYVDGADVVKKFQELEQVIVAVGLAVPRQGVFKPLVKYLLVVATPVEVVLVAVT---------DGGDGRLDVRPTQFSASSDGVNMNAIRGHPCGRIFMAGKDGNLYELIYEAGGATG-WLSYVGLGGSSGSRKCRKINRSTTPSSAVWNSFKQGRSRAARGAAITSPGPMAGLL----VKRLPRVTAARAXXXXXXXXXXXAGAASLLDLAVDPLRNALYTVDSTGVLRHYNLGPDGQQTVP---VGGDLDLWAASGQFCRLHSTNRAQDVPDARAFEPGHGLEAVALSVVDACEDACVHLVVVASSGMRVYLGPSGRASEIDTAQATSPLRVLHVRAPPPAALWEH--------------------RKALANPAAGAAPPSQPPTGFAAGATRXXXXXXXXXXXXXXXXXAYYAHRVTVVAQRAAGRGXXXXXXGLGLVAICESGVARLDQPQVSLAETALEI-DPA------------GGVLAIEEHPTVLGD-PAMASLLALTYTSGTPSAHNE---------IARQLAEANEDAPVAPPSARSQRAAHPPRAADGDP--------------NAPPAGEVPPPPPLCLPP---RGWLGGL--RGARGVVPLRELATQHAAPQRRLLCLSGAGLHMVAKLRPLDVLHRLLRAAPPRPDLLQLFFDSYGHAEACAMCFAIACGLPNDATAPPETLPPTDVRRRVTRWLLQQVKLSAASCPPERRLDRHARDRAATAIATGAGVLLAADERAG--PSAATRAAAVDALQRLGGAAHFAGSGDXXXXXXXXXXXXXXXXXXXXXXXXXXAVFNEEFRHSAQYLGLAQFLARLLRPAWFRPVAV 875          
BLAST of mRNA_E-siliculosus-1a_M_contig9.16975.1 vs. uniprot
Match: A0A7R9YE90_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YE90_9STRA)

HSP 1 Score: 263 bits (671), Expect = 5.440e-68
Identity = 243/850 (28.59%), Postives = 380/850 (44.71%), Query Frame = 0
Query:   52 FCDPYTNSYLGPQIQPKSFAMLPEALSRERDRVECMTFMGLLPEIDHSWMTVDNVLYLWNYHTQ------DFTQFRELEQVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHEKPQETG---SPR--NRRIQVRRTNFRASTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGSPVPSRQCSRLAHKSSSGGPGPVNSMFA--LLGLRRAERVLVDVVVDPLRNVLYTLDLAGDVDLFDLGADGNSTTQKAWFNNVFNIWTRAARFCQGYGNG-QSGLSHLTFKDPKQ-----HQIVSLGVVPATESKTVALVAVTDSGMRIYLSCGSS----------GGKRHNFRLTIVQIRCPPPEKLWQYLHQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMFQPADGFPARWERQPPS--VYGAYCCGGVTVLAQA-LTQGDRLVLIGSDLITRAKRKREMHQEEHPSMREAVTEMGDSAAAGAGGRQQQAMGRVWAISERPVALADNPEIGRVRALLSLSGAPSPSDNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVRGGRSTSGAVVGGVVSRAKAWQRSNRYASRPVAPSPPL---VASPGGSAGFPGGLNARDVGGMVQLPELGVQPYSDRRELLCLTGAGLQVLTRLRPVDLLYDLLARNHVEGVRLFFDDFSPDQSAAMCFSIACGLPRDLGTGSGXXXXXXXP--------VAGSTGXGGCNPSVSKAYGVPSHTVRARALDAALMICKPPGFSSP---GQPAGAXXXXXXXGGVAAT------AGGVIMGEKFTNSALHNGLQLFIGRLLRPFWFLPVVV 849
            F +PY +++ G  +  +    +P AL+ +   ++CM+FMGLLPEI  +W+++DN L+LWNY         DF +F  L+Q+IV+VALVPP+ GVF ++V+++LAVAT VE++LLAV + E+P+ TG    P   N  + +R T+F  S+D V+M+K+    +GR+FM G DG+LYE  Y+    F   +  +G  +  R+C +L H +S     P++S+    L  L    + LVDVVVD +R +LY L     ++ +DLG +G+       F     +      +C+ + +  + G     F   K       +IVS+ VVP TE+  V LV V+++G R Y+S  S              +    L++V +R PPP ++                                      +P +G+P R+  Q  S  V+ AY C G  V A+    + D + +   D  T  +    +    H S    VT    +AA     +   A  +VWA+ E    L ++     + AL   S  P+  +                                       S+SG+    + +  +         +R   P+PPL    A     AG  G  N ++V   V + E+ +Q +  RR  L L+  G+    + RP+D LYDL++R+ + G+  FF  F  +QS AMCFSIACGLP DL   +                  A ++     NP+V +        VR RA+  A  +   P  S P   G  A +        G   T      A   +   +F+ S  H GL L   R+LRP WF P+++
Sbjct:   11 FPEPYQSTW-GGAVHYEGVTAVPPALTEQYRSLKCMSFMGLLPEISCAWLSIDNKLFLWNYERARYQTDADFLEFDGLDQIIVSVALVPPRPGVFREKVKYLLAVATAVEIVLLAVAF-EEPEGTGVLGQPLGLNGTMTLRPTSFSVSSDNVTMMKLCGTNSGRIFMGGSDGSLYEALYANEEEFALGL-GLGFGMAGRKCRKLNHSAS-----PLSSLVPGFLKQLSAPSKPLVDVVVDDVRQILYALREDNSLEGYDLGVNGDLLKP---FGTRIQLRREVKHWCERHTSSYRPGPDSRLFDSTKPTSGALDKIVSMNVVPLTEANNVHLVLVSNAGFRFYVSTVSRYHSSXXXXXXXXAKRPTTLSVVHVRAPPPVEVGS---------------------------------ARGEPMEGYPPRYSPQTSSRSVHSAYYCHGCLVTAEGGADEADTVRVSQPDFCTEREVAAGLS---HWS----VTSGRANAALQEATQSIAASQKVWALDE-VAPLVNDISRAHLVALAMASRTPALPE-------------------------------LPTFLNPTSSSGSGSRSLPTSTRPRLSLRGPIARAAPPAPPLSLAYADRDSGAGI-GPANQKEV---VPMNEMAMQLWLPRRTFLGLSNVGIHRFLKRRPIDYLYDLVSRDDIRGIGTFFQLFGKEQSCAMCFSIACGLPTDLVEAASAASVAFPTQNDSALALAAAASPGPSLNPTVER--------VRERAVLVAQQLGGNPSISPPLSSGGEATSTGMSVATPGTPGTPRHQPTAANTVFTPEFSYSDQHEGLVLLATRILRPLWFKPIIL 765          
BLAST of mRNA_E-siliculosus-1a_M_contig9.16975.1 vs. uniprot
Match: A0A7S3M7K2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M7K2_9STRA)

HSP 1 Score: 240 bits (612), Expect = 3.330e-60
Identity = 238/879 (27.08%), Postives = 357/879 (40.61%), Query Frame = 0
Query:   12 FGVLRNANTVLLHNLRRDELSPELQKQLTATGMASTSQAYFCDPYTNSYLGPQIQPKSFAMLPEALSRERDRVECMTFMGLLPEIDHSWMTVDNVLYLWNYHTQDFTQFRE------------------LEQVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHEKPQETGSPRNRRIQVRRTNFRASTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGSPVPSRQCSRLAHKSSSGGPGPVNSMFALLGLRRAERVLVDVVVDPLRNVLYTLDLAGDVDLFDLGADGNSTTQKAWFNNVFNIWTRAARFCQGYGNGQSGLSHLTFKDPKQHQIVSLGVVPATESKTVALVAVTDSGMRIYLSCGSSGGKRHNFR---------------LTIVQIRCPPPEKLWQYLHQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMFQPADGFPARWERQPPSVYGAYCCGGVTVLAQALTQG-DRLVLIGSDLITRAKRKREMHQE-EHPSMREAVTEMGDSAAAGAGGRQQQAMGRVWAISERPVALADNPEIGRVRALLSLSGAPSPSDNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVRGGRSTSGAVVGGVVSRAKAWQRSNRYASRPVAPSPPLVASPGGSAGFPGGLNARDVGGMVQLPELGVQPYSDRRELLCLTGAGLQVLTRLRPVDLLYDLLARNHVEGV-----RLFFDDFSPDQSAAMCFSIACGLPRDLGTGSGXXXXXXXPVAGSTGXGGCNPSVSKAYGV--PSHTVRARALDAALMICKPPGFSSPGQPAGAXXXXXXXGGVAATAGGVIMGEKFTNSALHNGLQLFIGRLLRPFWFLPVV 848
            F +L  A+  L   LR DE + ++  Q +       S  Y+ +PY   + GP ++  SF  LP+ +  +  ++EC +FMG LPE+   W+TVDN L+LW Y +   T F                    + +VIV+VAL  PK GVF   V++VL VA+ VEV+LLAVT  E+            ++  T +   +D V+M+K+    +GR+FMAG DGN+YEL YS +   W ++   G      +C ++ H + +     +   F L      E  LVD+ VD +R V+Y +   G +  F LG+ G  TT      NV +         +    G                ++SL V+P TESK V +VAV  +G+RIYLS  ++     N+                + +  +R PP     +                                          P+    Q   V  A    GVT+LA    Q  D LV +  DL+ RA     +    +HPSMRE V    D   +G         G+++AI E   A    P++ R+RA+ + S  P  S                                  V + G +T  AV         A +    + +  +A    + A P G+      LN   + G +    L     S +R+ L LT  G+  L +LRP D+LY  LA  HV  +     R FF  F   +++AMC ++ACGLP D G                   G  N S+S+A  +  P  T++ RA+   L + + P + + G    A         +      V    +F  S+ H  L L   R+LRP W   VV
Sbjct:    3 FKILEKASETLQDKLRLDESALDIADQFSFRPDMHGSHRYYTEPYKTQW-GPLLEYGSFTALPKRILDQYTKIECASFMGTLPELGRVWVTVDNKLFLWKYTSAPSTSFPNEVAEDVDAISEDCEVYDGISEVIVSVALSAPKPGVFLDTVKYVLVVASPVEVVLLAVTCDEQGNN--------FKLVPTAYTMPSDNVAMVKVVGSQSGRIFMAGNDGNVYELDYSNSESVWSALVDAGGEHSRHKCRKINHFAWNWRLVHILPPF-LKSFAGEEDSLVDLAVDNVRQVVYAITAKGVLSAFYLGSTGTETTLFLSSFNVLDAARTHLTVSRSLPEGSPKPESFANTTAPGFNVLSLHVLPLTESKKVHVVAVLGNGIRIYLSLLTANRGLFNYMPGPQQQSGNYSVPGGVEVAYVRSPPSPAALRVCSNSSGRLSSASAPDGIQSAGGAGAGAELENGSA-------PSYMPSQALKVSSALYSQGVTMLALDKQQHPDELVCLFEDLVGRAHLTLGLPPAYQHPSMREGVCIGLDETTSG---------GKIYAIKEN-CAQIHFPDVARLRAMFAHSSTPPNSSIRDASHHFDTSLESRAVAAGAHQAGGGSGLSWLVGQDGDNTQSAVT-------PASEVPVVFGADALA----MAAKPAGTGFDTFDLNQVALLGEMSWQHLPCSSVSLQRQFLVLTNQGIHTLRKLRPADVLYRHLA--HVNSLADDQCRFFFSSFGALEASAMCVALACGLPCDAG-------------------GSAN-SLSQAAVIRRPLETIQMRAMSVMLGMTQGPTYKTLGSGPAAAATVMQDSRLVLRDSSV----EFVRSSAHEALYLVASRILRPLWLRSVV 817          
BLAST of mRNA_E-siliculosus-1a_M_contig9.16975.1 vs. uniprot
Match: L8HDY8_ACACA (Nucleoporin, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HDY8_ACACA)

HSP 1 Score: 196 bits (499), Expect = 7.010e-47
Identity = 119/343 (34.69%), Postives = 182/343 (53.06%), Query Frame = 0
Query:   63 PQIQPKSFAMLPEALSRERDRVECMTFMGLLPEIDHSWMTVDNVLYLWNYHTQDFTQFRELEQVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHEKPQETGSPRNRRIQVRRTNFRASTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGSPVPSRQCSRLAHKSSSGGPGPVNSMFALLGLRRAERVLVDVVVDPLRNVLYTLDLAGDVDLFDLGADGNSTTQKAWFNNVFNIWTRAARFCQGYGNGQSGLSHLTFKDPKQHQIVSLGVVPATESKTVALVAVTDSGMRIYLSCGSSGG------KRHNFRLTIVQIRCPP 399
            PQ +      LPE L +    +EC  F+GL PEI+ +W+TVDN L LWNY ++++  + + +Q+IV+V L+PPK+ VF+++V++VL +AT VE++LLAV +     E  +P+   I +  T    S D V+M+KI     GR+FM G DG+LYEL Y    G W+S          ++  ++ H            M AL     A+  ++D+V+D  RN+LYTL   G ++++DLG DG      A  +NV      A   C      Q G         K+  + S+ V+P +ESK + LVA+T S +R+Y S  S  G       +   +L ++ IR PP
Sbjct:   86 PQFRLLKMIPLPETLHQMYKSIECKCFLGLFPEINRAWITVDNQLCLWNYESKEYAIWTDQDQIIVSVGLIPPKRDVFSEDVKYVLVLATPVEIVLLAVWF-----EDNTPQGE-IHLEPTRIALSADNVNMVKIVGTKRGRIFMGGSDGSLYELEYQADEG-WFS----------KRARKINHTRGI--------MSALTSYWSAKPAIIDIVIDESRNILYTLSARGAIEVYDLGTDGLGFQHVAAMSNVI---ASAETLCPRLKFTQIG---------KEASVKSIAVIPKSESKYLTLVAITSSALRLYFSALSLSGDAAAIPSQRPTKLELIHIRFPP 391          
BLAST of mRNA_E-siliculosus-1a_M_contig9.16975.1 vs. uniprot
Match: I2CP24_NANGC (Nuclear pore complex protein Nup155 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP24_NANGC)

HSP 1 Score: 183 bits (464), Expect = 2.110e-44
Identity = 132/407 (32.43%), Postives = 203/407 (49.88%), Query Frame = 0
Query:   16 RNANTVLLHNLRRDELSPELQKQLTAT---GMASTSQAYFCDPYTNSYLGPQIQPKSFAMLPEALSRERDRVECMTFMGLLPEIDHSWMTVDNVLYLWNYHTQ-DFTQFRELEQVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHEKPQETGSPRNRRIQVRRTNFRASTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGSPVPSRQCSRLAHKSSSGGPGPVNSMFALLGLRRAE-RVLVDVVVDPLRNVLYTLDLAGDVDLFDLGADGNSTTQKAWFNNVFNIWTRAARFCQGYGNGQSGLSHLTFKDPKQHQIVSLGVVPATESKTVALVAVTDSGMRIYL-SCGSS---GGKRHNFR---LTIVQIRCPPPEKLWQYLHQH 410
            R A    +    R E  PE  +   A+   G  S    ++  P+ +   GP ++ +S    P A+ R    ++ M+F GL  EI  +W+TVDN+LY+W+YHT+       +L+Q+IV V LV P   VF   V H+L   T   V L A+ +     E G+P +  +QVRRTNFR STDGV M K+     GR+F+AG+DG++YE+ YS     ++          S +C +L   S   GP  +     L  L +     +VD+VVDP R++LY+L     + ++DLG   ++ T      +VF   T A R+ +    G+       F      +++SL V+  +ES T  L+AV+++G R Y  +C  +   G K    R   L +V +R PP   +W+ L  H
Sbjct:   42 RQAVLATIEEKMRKEGKPEDSRMNYASMSGGGVSGDMPFYIHPWKDPAFGPPVEYQSLRPFPPAILRTYSLLQAMSFQGLWTEIHRAWITVDNLLYIWDYHTEASHAIVDDLDQLIVAVGLVRPNPEVFKDTVTHLLVACTPSAVELFALCF-----EDGTP-DSALQVRRTNFRVSTDGVVMRKVVGTRTGRIFLAGQDGSVYEIQYSNEKDLYF--------YSSNKCRKLNRTS---GPASLAVSAVLRHLWKTNVSEIVDLVVDPTRSILYSLSADNLIQVYDLGEKDDACTSLGIKEDVF---TMALRYFKHRHRGEQ----QRFTKGHPFRLLSLHVLSCSESATKHLLAVSNAGHRFYFETCPKTPYIGSKLFAPRPSTLALVDVRLPPKPSVWEALRGH 424          
BLAST of mRNA_E-siliculosus-1a_M_contig9.16975.1 vs. uniprot
Match: A0A1Y2C791_9FUNG (Nucleoporin-domain-containing protein n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2C791_9FUNG)

HSP 1 Score: 176 bits (447), Expect = 7.450e-41
Identity = 109/311 (35.05%), Postives = 173/311 (55.63%), Query Frame = 0
Query:   73 LPEALSRERDRVECMTFMGLLPEIDHSWMTVDNVLYLWNYHT-QDFTQFRELEQVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHEKPQETGSPRNRRIQVRRTNFRASTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGSPVPSRQCSRLAHKSSSGGPGPVNSMFALLGLRRAERVLV-DVVVDPLRNVLYTLDLAGDVDLFDLGADGNSTTQKAWFNNVF---NIWTRAARFCQGYGNGQSGLSHLTFKDPKQHQIVSLGVVPATESKTVALVAVTDSGMRIYLSC 378
            LP+ L RE D ++C  F+GL PEI  +W+T+D+ L+LWN+ + ++F  F E +QVIV+V LV P  GVF  E+ ++L VAT +E++L+AV Y+E            + + RT+   ++D VSM  I    NGR+FM G +G LYEL Y    G W++          R+C ++   +++       S+F        E   V  +++D  RN+LY L    +++LF LG DG        F  +F   +I+++A ++ +      SG+    + DP+  QIVSL ++P +ES  V L+AV+ SG R+Y +C
Sbjct:   56 LPDQLYREYDFLQCRCFLGLFPEIHRAWITIDHQLFLWNFDSPEEFVVFDEQDQVIVSVGLVKPLPGVFLDEINYLLVVATPIEIMLVAVAYNEAKGPAA------LNLYRTDITIASDNVSMTSIVGSSNGRIFMCGSNGRLYELQYQSEDG-WFT----------RKCRKIDLTTTA------YSLFVPTIFNFVEEDPVRKIIIDAQRNILYALTERSNIELFYLGVDGKD------FKKLFRQTDIFSQAQKWLEN-----SGVYPHPYLDPRNFQIVSLHIIPPSESHNVHLMAVSSSGYRLYFAC 332          
BLAST of mRNA_E-siliculosus-1a_M_contig9.16975.1 vs. uniprot
Match: K3X038_GLOUD (Nucleoporin_N domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X038_GLOUD)

HSP 1 Score: 166 bits (421), Expect = 1.310e-40
Identity = 119/384 (30.99%), Postives = 178/384 (46.35%), Query Frame = 0
Query:   27 RRDELSPELQKQLTATGMASTSQAYFCDPYTNSYLGPQIQPKSFAMLPEALSRERDRVECMTFMGLLPEIDHSWMTVDNVLYLWNYHTQDFTQFRELEQVIVTVAL-VPPKKGVFNKEVEHVLAVATTVEVILLAVTYHEKPQETGSPRNRRIQVRRTNFRASTDGVSMLKIAAHPNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGSPVPSRQCSRLAHKSSSGGPGPVNSMFALLGLRRAERVLVDVVVDPLRNVLYTLDLAGDVDLFDLGADGNSTTQKAWFNNVFNIWTRAARFCQGYGNGQSGLSHLTFKDPKQHQIVSLGVVPATESKTVALVAVTDSGMRIYLSCGSSGG---------KRHNFRLTIVQIRCPPP 400
            R D   P+L  QL      S  Q YF +PY   +    ++  +   LP  ++   +  + +T  GLL  ID++W +VD  L+LWNY  +      E +Q +V V + + P  GVF  +V+HVL VATTVEV+L+AV Y     E   P+   ++++RT    STD   + +I    NGR+F  G DG++YE  Y        +  S   P  ++ C ++AH S+     P      L+GL  +   +++   D  R +LY+L   G + LFD G  G  T          N+    A++ +     +              QIVSL V+P  ES  V LVAV  + +R Y++  S             +   RL IV IR PPP
Sbjct:   32 REDAQYPDLYDQLANQ---SEPQNYFFEPYATQWCPQLVKKGNVIPLPGVIATSLEDTKSITLSGLLHAIDYAWTSVDTRLFLWNYKARGKFAVFEFDQAVVAVGICMKPAPGVFTDKVQHVLVVATTVEVLLVAVLY-----ENNDPQGGAVKLQRTKLSVSTDNCVVRRIVTTRNGRIFFGGSDGSVYEFLYGPD-----AESSSAIPFFNKPCKKIAHTSTYAAYLP----SFLMGLTSSPGKILEFANDEERQILYSLHENGHITLFDQGVSGEDTKVVC----SLNLLEAGAKYARENRRTRVSCPDERLFQNTNMQIVSLAVIPREESAFVNLVAVASNAIRFYITVYSRRTYTVGNAIPRTKRPSRLEIVYIRLPPP 394          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig9.16975.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0M6_ECTSI0.000e+090.71Nucleoporin_N domain-containing protein n=1 Tax=Ec... [more]
A0A6H5J909_9PHAE0.000e+077.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J944_9PHAE1.040e-8888.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YRU3_9STRA2.030e-7230.04Nup133 N terminal like-domain-containing protein n... [more]
A0A7R9YE90_9STRA5.440e-6828.59Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S3M7K2_9STRA3.330e-6027.08Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
L8HDY8_ACACA7.010e-4734.69Nucleoporin, putative n=1 Tax=Acanthamoeba castell... [more]
I2CP24_NANGC2.110e-4432.43Nuclear pore complex protein Nup155 (Fragment) n=1... [more]
A0A1Y2C791_9FUNG7.450e-4135.05Nucleoporin-domain-containing protein n=1 Tax=Rhiz... [more]
K3X038_GLOUD1.310e-4030.99Nucleoporin_N domain-containing protein n=1 Tax=Gl... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014908Nucleoporin, Nup133/Nup155-like, N-terminalPFAMPF08801Nucleoporin_Ncoord: 67..408
e-value: 1.3E-54
score: 185.7
IPR004870Nucleoporin, Nup155-likePANTHERPTHR10350NUCLEAR PORE COMPLEX PROTEIN NUP155coord: 964..1455
coord: 46..864

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig9contigE-siliculosus-1a_M_contig9:548480..569880 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig9.16975.1mRNA_E-siliculosus-1a_M_contig9.16975.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig9 548306..570177 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig9.16975.1 ID=prot_E-siliculosus-1a_M_contig9.16975.1|Name=mRNA_E-siliculosus-1a_M_contig9.16975.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=1548bp
MPAAAEEDHDPFGVLRNANTVLLHNLRRDELSPELQKQLTATGMASTSQA
YFCDPYTNSYLGPQIQPKSFAMLPEALSRERDRVECMTFMGLLPEIDHSW
MTVDNVLYLWNYHTQDFTQFRELEQVIVTVALVPPKKGVFNKEVEHVLAV
ATTVEVILLAVTYHEKPQETGSPRNRRIQVRRTNFRASTDGVSMLKIAAH
PNGRVFMAGKDGNLYELTYSVAYGFWYSVFSVGSPVPSRQCSRLAHKSSS
GGPGPVNSMFALLGLRRAERVLVDVVVDPLRNVLYTLDLAGDVDLFDLGA
DGNSTTQKAWFNNVFNIWTRAARFCQGYGNGQSGLSHLTFKDPKQHQIVS
LGVVPATESKTVALVAVTDSGMRIYLSCGSSGGKRHNFRLTIVQIRCPPP
EKLWQYLHQHQGAAGAVPVPADGGGGTATQQQQQQQQQQMFQPADGFPAR
WERQPPSVYGAYCCGGVTVLAQALTQGDRLVLIGSDLITRAKRKREMHQE
EHPSMREAVTEMGDSAAAGAGGRQQQAMGRVWAISERPVALADNPEIGRV
RALLSLSGAPSPSDNNGTTAANGGGGGASRSSGGSSGGGGGDSSSRAVVR
GGRSTSGAVVGGVVSRAKAWQRSNRYASRPVAPSPPLVASPGGSAGFPGG
LNARDVGGMVQLPELGVQPYSDRRELLCLTGAGLQVLTRLRPVDLLYDLL
ARNHVEGVRLFFDDFSPDQSAAMCFSIACGLPRDLGTGSGGGGGGGGPVA
GSTGGGGCNPSVSKAYGVPSHTVRARALDAALMICKPPGFSSPGQPAGAG
IGIGIGGGVAATAGGVIMGEKFTNSALHNGLQLFIGRLLRPFWFLPVVVA
PPGGGGGGGGGAKRSADGTVKSGGSPPPPPFVRDLEALRVPLESLRASIR
AVFPRAVGEDLAALASREAKAAAAMPASGGLIGNGGADARRGAELLAEAA
REWRGERALGADGQLARACAALTAVGRLEAVVDVCMTCAKNFGEGVVVSG
GGGQGGGGGVEAWEEGVYQGGGIVGAEQREKARLECYKGVLEAVLGLLKQ
EQQQLRSAAAAGQGGVRGSKKVDSLIARCLSYKAPLLEEMLFGVLEEHDK
KLLMSIRTPGVEQYLKRDPEDLFRHYMLSKEYPKAVHLMDCEARVEARSG
VHVRHRVECLLKAISACHKCDLDSAQMVAPGWSLNHAKLRTMEDERDVLL
VQERLLSDLKATMAPLERLAQEGRGTEGLIAELAERRRIAETWTTDVVDP
SELYRQASGSFLWEGCLRLMQCCEFDEPIVAKRLIRSIIWREVPSVSRGG
SKCRAQVFISAMRDRPGEVEVDDVRQELDRGLLRGGGGDGGTRAGRRIAF
EDDGWFTPLLDKMSVLSQDLLAHKASFVLSVETLCLELQMIADEFHEAGG
SASALCVVEAVGRAGLSAVALLDAYEYLNQHHYPSDDHARLRRFAVMARL
LELAAAGGDGNKAAAGGVGLVSETVRPERLERLAHDTLAGLDSLRFSSSS
AAAAGGEDADRDAGARELVEEVRRKVDKLVRSPRFPRNGSSISRPYF*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004870Nucleoporin_Nup155
IPR014908Nucleoporin_Nup133/Nup155_N