prot_E-siliculosus-1a_M_contig9.16974.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig9.16974.1
Unique Nameprot_E-siliculosus-1a_M_contig9.16974.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length210
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig9.16974.1 vs. uniprot
Match: D7G0M7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0M7_ECTSI)

HSP 1 Score: 423 bits (1088), Expect = 6.520e-150
Identity = 203/209 (97.13%), Postives = 206/209 (98.56%), Query Frame = 0
Query:    1 VNKNASDEVFDGSYSPPPSDPRFSTVTRMELTKSVHTPGYAIRRPKDGFDRLNANRTNYSLGQHLTTELKTATAELQMKHPRDQPRVDQPAVGGSTLRDGSYRLDTSARDSVRRGGGGGEGVLGVRFDLINGREDEGARGKVAMQTGPRRTLNNAEKEVLHPTDGWGDVPGGMYVDILTGKDRRKFDVTERGAGTPVRSDTVSGRTRPW 209
            VNKNASDEVFDGSYSPPPSDPRFSTVTRMELTKSVHTPGYAIRRPK+GFDRLNANRTNYSLGQH TTELKTATAELQMKHPRDQPRVDQPAVGGSTLRDGSYRLDTSARDSVRRGGGGGEGVLGVRFD+INGREDEGARGKVAM+TGPRRTLNNAEKEVLHPTDGWGDVPGGMYVDILTGKDRRKFDV ERGAG PVRSDTVSGRTRPW
Sbjct:    2 VNKNASDEVFDGSYSPPPSDPRFSTVTRMELTKSVHTPGYAIRRPKEGFDRLNANRTNYSLGQHPTTELKTATAELQMKHPRDQPRVDQPAVGGSTLRDGSYRLDTSARDSVRRGGGGGEGVLGVRFDVINGREDEGARGKVAMRTGPRRTLNNAEKEVLHPTDGWGDVPGGMYVDILTGKDRRKFDVPERGAGAPVRSDTVSGRTRPW 210          
BLAST of mRNA_E-siliculosus-1a_M_contig9.16974.1 vs. uniprot
Match: A0A7S2S3K8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S3K8_9STRA)

HSP 1 Score: 114 bits (284), Expect = 2.890e-27
Identity = 75/217 (34.56%), Postives = 113/217 (52.07%), Query Frame = 0
Query:    1 VNKNASD-EVFDGSYSPPPSDPRFSTVTRMELTKSVHTPGYAIR----RPKDGFDRLNANRTNYSLGQHLTT--ELKTATAELQMKHPRDQPRVDQPAVGGSTLRDGSYRLDTSARDSVRRGGGGGEGVLGVRFDLINGREDEGARGKVAMQTGPRRTLNNAEKEVLHPTDGWGDVPGGMYVDILTGKDRRKFDVTER-GAGTPVRSDTVSGRTRPW 209
            ++KNASD +   G+   P  DPR   V +       H+   A+     R +  FDRL+A++TNY +   L T    KT T+ +   HP+ +P+ +Q A+GG     G Y  +  A+++V+RGGGGGEG LGVRF+++       AR    +QTGPR ++N  E      ++ +GD    M  +I+TGK    F   +  G    +R +    RTRPW
Sbjct:   65 IHKNASDKDSIQGAEGGPYHDPR--KVFKTTFASDYHSGASALSEKYVRERPAFDRLSASKTNYEITSPLETIPPFKT-TSHVLHAHPKTRPQPEQAAIGGWRTSTGEYCTNELAKETVKRGGGGGEGSLGVRFNIVTNEGAPRARETALLQTGPRVSMNKKEPW-RQGSNRFGD--SDMQTNIITGKQHAHFQAPKPLGPADLLRPNEAIARTRPW 275          
BLAST of mRNA_E-siliculosus-1a_M_contig9.16974.1 vs. uniprot
Match: A0A8J2T189_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T189_9STRA)

HSP 1 Score: 108 bits (269), Expect = 2.340e-25
Identity = 81/212 (38.21%), Postives = 111/212 (52.36%), Query Frame = 0
Query:    1 VNKNASDE--VFDGSYSPPPSDPRFSTVTRMELTKSVHTPGYAIRRPKDGFDRLNANRTNYSLGQHLTTELKTATAELQMKHPRDQPRVDQPAVGGSTLRDGSYRLDTSARDSVRRGGGGGEGVLGVRFDLINGREDEGAR-GKVAMQTGPRRTLNNAEKEVLHPTDGWGDVPGGMYVDILTGKDRRKFDVTERGAGTPVRSDTVSGRTRPW 209
            V+KNASD+  V D +  PP     F++    E  +   T      + +  FDR ++  TNYSLG+    E KT T ++   HP  +PRVDQ  +GG    DGSY+L+  A DS++RGGGGG G LG+ F++I G E  G R GK A+  G RRTLN  +    HP D +  V   M     T    +  ++ +R       S+ V  RTRPW
Sbjct:   49 VDKNASDKEAVIDSTGFPP----CFTSTNTAEFNRDTTTFSRRYVKREPCFDRQSSCATNYSLGE-APFETKT-TNDVLFAHPLTKPRVDQGEIGGWKHPDGSYKLEQEAIDSIKRGGGGGAGCLGISFNVITGEEIPGIREGKRAIY-GARRTLNVTQYRE-HPGDSYNPVT--MRDVPATAPPHQTTEMLKR-------SEDVHLRTRPW 243          
BLAST of mRNA_E-siliculosus-1a_M_contig9.16974.1 vs. uniprot
Match: A0A7S2F937_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2F937_9STRA)

HSP 1 Score: 101 bits (251), Expect = 1.900e-22
Identity = 72/211 (34.12%), Postives = 102/211 (48.34%), Query Frame = 0
Query:    1 VNKNASDEV-FDGSYSPPPSDPRFSTVTRMELTKSVHTPGYAIRRPKDGFDRLNANRTNYSLGQHLTTELKTATAELQMKHPRDQPR-VDQPAVGGSTLRDGSYRLDTSARDSVRRGGGGGEGVLGVRFDLINGREDEGARGKVAMQTGPRRTLNNAEKEVLHPTDGWGDVPGGMYVDILTGKDRRKFDVTERGAGTPVRSDTVSGRTRPW 209
            ++KNASD+V   G     P     S         +  +  Y    P   +DR+++ +TNYSLG++       +T      HP   P  V Q  +GG    DGSY  +  + DS+ RGGGGGEG LGV+F+++N   D GAR +VAM+TG R ++N  E       D +GD      V+I     +R      + A   +R D    RTRPW
Sbjct:   68 MDKNASDKVAIQGGGVVQPRQYENSYKAEFHPGTTALSSAYVKEGP--AYDRISSCKTNYSLGEYRPPGPAISTTHSH--HPYKMPTDVQQANIGGWKRSDGSYHCEHESNDSIVRGGGGGEGSLGVQFNIVNNASDPGARDRVAMRTGARVSVNKREPWSAG-CDAYGDPGPDGPVNIFGKARQRPQAPPHQTAQALLRPDHDVLRTRPW 273          
BLAST of mRNA_E-siliculosus-1a_M_contig9.16974.1 vs. uniprot
Match: A0A7S2D1K6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D1K6_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 1.610e-20
Identity = 77/215 (35.81%), Postives = 104/215 (48.37%), Query Frame = 0
Query:    3 KNASD-EVFDGS---YSPPPSDPRFSTVTRMELTKSVHTPGYAIRRPKDGFDRLNANRTNYSLGQHLTTELKTA-TAELQMKHPRDQPRVDQPAVGGSTLRDGSYRLDTSARDSVRRGGGGGEGVLGVRFDLINGREDEGARGKVAMQTGPRRTLNNAEKEVLHPTDGWGDVPGGMY--VDILTGKDRRKFDVT-ERGAGTPVRSDTVSGRTRPW 209
            KN SD E F G    Y  P    R +  +      ++H+  Y    PK  + RL A RTNY+LG +   E K A T+      P    RV   A  G       Y  D  AR+S+ RGGGGGEG LG RFD+ING++D   R +V+M+TG R ++N  E     P     D  G  +  V+IL+G+ R + +   ++ A    R D     TRPW
Sbjct:   74 KNHSDLESFQGGPPKYKDPNVVYRTTKASDFNHESTLHSNEYMKSEPK--YTRLTAGRTNYTLGAY---EGKLASTSHTHHAPPCPIERVKGQATIGGWQTGNKYHTDIHARESIMRGGGGGEGSLGTRFDIINGKDDPSFRNRVSMRTGARVSVNKRE-----PWSQGADRYGDHHEPVNILSGQPRTRHNPPPQQNALQLRRPDQPLLATRPW 278          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig9.16974.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G0M7_ECTSI6.520e-15097.13Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2S3K8_9STRA2.890e-2734.56Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A8J2T189_9STRA2.340e-2538.21Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2F937_9STRA1.900e-2234.12Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2D1K6_9STRA1.610e-2035.81Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig9contigE-siliculosus-1a_M_contig9:545382..546509 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig9.16974.1mRNA_E-siliculosus-1a_M_contig9.16974.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig9 545382..546509 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig9.16974.1 ID=prot_E-siliculosus-1a_M_contig9.16974.1|Name=mRNA_E-siliculosus-1a_M_contig9.16974.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=210bp
VNKNASDEVFDGSYSPPPSDPRFSTVTRMELTKSVHTPGYAIRRPKDGFD
RLNANRTNYSLGQHLTTELKTATAELQMKHPRDQPRVDQPAVGGSTLRDG
SYRLDTSARDSVRRGGGGGEGVLGVRFDLINGREDEGARGKVAMQTGPRR
TLNNAEKEVLHPTDGWGDVPGGMYVDILTGKDRRKFDVTERGAGTPVRSD
TVSGRTRPW*
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