prot_E-siliculosus-1a_M_contig89.16913.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig89.16913.1
Unique Nameprot_E-siliculosus-1a_M_contig89.16913.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length474
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig89.16913.1 vs. uniprot
Match: D7FST5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FST5_ECTSI)

HSP 1 Score: 307 bits (787), Expect = 5.900e-97
Identity = 380/422 (90.05%), Postives = 381/422 (90.28%), Query Frame = 0
Query:   53 MARIAGALPRLGVVSLYLLGAATTVVRHADAQYSGRDCNEFNLACFESETCAACFETATSEAFFICLDNLPIPTTDDSCDSNEDFACCFNEASGLDCINDPTTFALMECLYDDANQCEENWTCSGSSGGGDPSTTSASGSTPAPSLPATTSAXXGGXXXXXXXXXXXXXXXXXXXXXXXXXATDGGMAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRALDITPSPSPAAAMPSXXXXXXXXXXXXXXXXP-TAAGXXXXXXXXXXXXXTGEAGGGSAPTASGADETEAPTSAAXXXXXXXXXXXXXXXXXXXXXXXTSGGRGLLSSSVATVGGVVAGLLAFSFAAVVV 473
            M R AGALPRLGVVSLYLLGAATTVVRHADAQYSGRDCNEFNLACFESETCAA      SEAFF CLDNLPIPTTDDSCDSNE+FACCFNEASGLDCINDPTTFALMECLYDDANQCEENWTCSGSSGGGDPSTTSASGSTPAPSLPATTSAXXGGXXXXXXXXXXXXXXXXXXXXXXXX ATDGGMA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRALDIT           XXXXXXXXXXXXXXXX  TA G XXXXXXXXXXX TGEAGGG AP ASGADETEAPTS  XXXXXXXXXXXXXXXXXXXX   TSGG  LL SSV TVGGVVA LLAF  AAVVV
Sbjct:    1 MTRTAGALPRLGVVSLYLLGAATTVVRHADAQYSGRDCNEFNLACFESETCAAXXXXXXSEAFFTCLDNLPIPTTDDSCDSNEEFACCFNEASGLDCINDPTTFALMECLYDDANQCEENWTCSGSSGGGDPSTTSASGSTPAPSLPATTSAXXGGXXXXXXXXXXXXXXXXXXXXXXXXSATDGGMAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRALDITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTATGDXXXXXXXXXXXATGEAGGGPAPIASGADETEAPTSXXXXXXXXXXXXXXXXXXXXXXTDTTSGGCRLLLSSVTTVGGVVASLLAFLAAAVVV 422          
BLAST of mRNA_E-siliculosus-1a_M_contig89.16913.1 vs. uniprot
Match: A0A6H5K194_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K194_9PHAE)

HSP 1 Score: 196 bits (499), Expect = 1.010e-57
Identity = 127/141 (90.07%), Postives = 130/141 (92.20%), Query Frame = 0
Query:   99 ESETCAACFETATSEAFFICLDNLPIPTTDDSCDSNEDFACCFNEASGLDCINDPTTFALMECLYDDANQCEENWTCSGSSGGGDPSTTSASGSTPAPSLPATTSAXXGGXXXXXXXXXXXXXXXXXXXXXXXXXATDGGM 239
            ESETCAACFE +TS+AFF CLDNLPI TTDD CDSNEDFACCFNEASGLDCINDPTTFAL+ECLYDDAN CEENWTCSG S GG PSTTSASGSTP PSLPATTSAXXGG XXXXXXXXXXXXXXXXXXXXXXX ATDGGM
Sbjct:    4 ESETCAACFEASTSDAFFTCLDNLPIFTTDDGCDSNEDFACCFNEASGLDCINDPTTFALIECLYDDANHCEENWTCSGLSRGGAPSTTSASGSTPTPSLPATTSAXXGGAXXXXXXXXXXXXXXXXXXXXXXXFATDGGM 144          
BLAST of mRNA_E-siliculosus-1a_M_contig89.16913.1 vs. uniprot
Match: D7FST4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FST4_ECTSI)

HSP 1 Score: 128 bits (321), Expect = 3.610e-29
Identity = 266/427 (62.30%), Postives = 283/427 (66.28%), Query Frame = 0
Query:   53 MARIAGALPRLGVVSLYLLGAATTVVRHADAQYSGRDCNEFNLACFESETCAACFETATSEAFFICLDNLPIPTTDDSCDSNEDFACCFNEASGLDCINDPTTFALMECLYDDANQCEENWTCSG-SSGGGDPSTTSASGSTPAPSLPATTSAXXGGXXXXXXXXXXXXXXXXXXXXXXXXXA---TDGGMAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRALDITPSPSPAAAMPSXXXXXXXXXXXXXXXXPTAAGXXXXXXXXXXXXXTG--EAGGGSAPTASGADETEAPTSAAXXXXXXXXXXXXXXXXXXXXXXXTSGGRGLLSSSVATVGGVVAGLLAFSFAAVVV 473
            MAR   A PRL   SLYLL AAT VV +ADAQ   RDC   + AC ES+ C  C    + ++F  CL    I     SC+  E  ACC NE SG+DC++DP TF   ECLYD    C+  WTC+G ++ GGD  TT A    PAP+   T +   GGXXX                      A   TDGGM+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                          DRALDIT           XXXXXXXXXXXXXXXX     XXXXXXXXXXXXX    EAGGGSAPTASGADETEAPTSAAXXXXXXXXXXXXXXXXXXXXXX TSGGRGLLSSSV TVGGVVAGLLAFS AAVVV
Sbjct:    1 MARTPAAPPRLA--SLYLLVAATVVVLYADAQ---RDCTGTSQACVESDVCLECTSFTSGDSFLDCLAG--IGAEFGSCEYVEQQACCLNEVSGIDCVSDPVTFEFFECLYDPTEACDGGWTCNGDTTNGGD--TTPA----PAPAASGTDTPVAGGXXXAETAAPAAPTAATTSAGVDDTMAPSATDGGMSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------DRALDITTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAGGGSAPTASGADETEAPTSAAXXXXXXXXXXXXXXXXXXXXXXTTSGGRGLLSSSVTTVGGVVAGLLAFSAAAVVV 388          
BLAST of mRNA_E-siliculosus-1a_M_contig89.16913.1 vs. uniprot
Match: D7FST1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FST1_ECTSI)

HSP 1 Score: 110 bits (274), Expect = 2.100e-23
Identity = 50/95 (52.63%), Postives = 64/95 (67.37%), Query Frame = 0
Query:   99 ESETCAACFETATSEAFFICLDNLPIPTTDDSCDSNEDFACCFNEASGLDCINDPTTFALMECLYDDANQCEENWTCSGSSGGGDPSTTSASGST 193
            + E C  C   A  +AFF C+D+  +  T D C +NE+F CCFNEA+G+DC+ DP T AL EC++  +N CEE W C G+S G DP TTSASGST
Sbjct:   23 KEEVCTECSNAAADDAFFACIDSKHLSITYDVCAANEEFVCCFNEATGIDCLGDPVTRALFECMFGKSNLCEEKWACGGASAGDDPPTTSASGST 117          
BLAST of mRNA_E-siliculosus-1a_M_contig89.16913.1 vs. uniprot
Match: D7FST6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FST6_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 5.290e-22
Identity = 60/129 (46.51%), Postives = 77/129 (59.69%), Query Frame = 0
Query:   53 MARIAGALPRLGVV--SLYLLGAATTVVRHADAQYSGRDCNEFNLACFESETCAACFETATSEAFFICLDNLPIPTTDDSCDSNEDFACCFNEASGLDCINDPTTFALMECLYDDANQCEEN-WTCSGS 178
            M R   ALPRL +V  +L LL A  TVV   DAQ   RDC++  LAC ES+ C+AC  + +  A+  C   LP       C   E   CC+NEASG DC+ DP T+A +ECL+D  + CE++ WTCSGS
Sbjct:    1 MGRSPAALPRLVLVVATLCLLSAPNTVVLRVDAQ--SRDCSDLLLACDESDFCSACLASTSEPAYAACESALPSDLF--VCQYAEYNVCCYNEASGNDCVGDPVTYAYLECLWDTTDSCEDDDWTCSGS 125          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig89.16913.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FST5_ECTSI5.900e-9790.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K194_9PHAE1.010e-5790.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FST4_ECTSI3.610e-2962.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FST1_ECTSI2.100e-2352.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FST6_ECTSI5.290e-2246.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..447
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 473..473
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 448..472
NoneNo IPR availableTMHMMTMhelixcoord: 453..472

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig89contigE-siliculosus-1a_M_contig89:647093..653695 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig89.16913.1mRNA_E-siliculosus-1a_M_contig89.16913.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig89 647093..653695 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig89.16913.1 ID=prot_E-siliculosus-1a_M_contig89.16913.1|Name=mRNA_E-siliculosus-1a_M_contig89.16913.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=474bp
FLSLSPAAPILTTTTHTTAFFVGSAEDHPTGPRSTQSSALLSISQDQRSF
PVMARIAGALPRLGVVSLYLLGAATTVVRHADAQYSGRDCNEFNLACFES
ETCAACFETATSEAFFICLDNLPIPTTDDSCDSNEDFACCFNEASGLDCI
NDPTTFALMECLYDDANQCEENWTCSGSSGGGDPSTTSASGSTPAPSLPA
TTSATGGGAETAAPAAPTASTTSAGVAETMAPSATDGGMAAAPTATTTSA
GGDETMAPSASDGGMAAAPTATTTSAGGDETMAPSASDGGMAAAPTATTT
SAGGDKTMAPSDTDGVMSPAPTATTTSAGGDETMAPSPADGDRALDITPS
PSPAAAMPSATTTTTSMAGESETMAPTAAGDGDRDLDVTPSPATGEAGGG
SAPTASGADETEAPTSAAGGVDTSAAPTAVGEGEDGDAADTTSGGRGLLS
SSVATVGGVVAGLLAFSFAAVVV*
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