prot_E-siliculosus-1a_M_contig89.16890.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig89.16890.1
Unique Nameprot_E-siliculosus-1a_M_contig89.16890.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length239
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig89.16890.1 vs. uniprot
Match: A0A6H5K6V4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6V4_9PHAE)

HSP 1 Score: 251 bits (641), Expect = 2.670e-81
Identity = 149/215 (69.30%), Postives = 157/215 (73.02%), Query Frame = 0 
Query:    1 MSLSPYARPLPYGGWALSLTILLGGFFWVRAEGMSAPGSGSRDGQANSRQTQEGDEXXXXXXXXXSAHCTPSSAYQTDQEADRAHQQQISR-RRYNNQSSLFARIRTMPSSLAPLSEWQTTAAAADGEETYVRRDASPAALSGFRAAAXXXXATSAIRKSHFNHVVEPTDRWRLEREAFRVKVHEHVGRELARMATQGATSLAIVAEAEERGSVI 214
            MSLSPYARPLPYGGWALSLTILLGGFFW RAEG+S  GS  RDGQAN RQTQEGDE         SAH T S                    RRY+NQ SLFAR+R  P SL P   WQTTAAA DGEETY+RRDA+PAALSGF A  XXXX   A RK HFNHVVEPTDRWRLEREAFRVKVHEHV REL RMATQ AT+LA+V EAEERGSV+
Sbjct:    1 MSLSPYARPLPYGGWALSLTILLGGFFWARAEGISVAGSSHRDGQANRRQTQEGDEEEQPEETR-SAHRTSSXXXXXXXXXXXXXXXXXXXXRRYSNQRSLFARVRPTPLSLTPPLPWQTTAAAVDGEETYIRRDAAPAALSGFCAXXXXXXXXXATRKPHFNHVVEPTDRWRLEREAFRVKVHEHVDRELERMATQAATALAVVTEAEERGSVM 214
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BLAST of mRNA_E-siliculosus-1a_M_contig89.16890.1 vs. uniprot
Match: D8LSI9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSI9_ECTSI)

HSP 1 Score: 198 bits (504), Expect = 2.340e-61
Identity = 115/134 (85.82%), Postives = 119/134 (88.81%), Query Frame = 0 
Query:   81 ADRAHQQQISRRRYNNQSSLFARIRTMPSSLAPLSEWQTTAAAADGEETYVRRDASPAALSGFRAAAXXXXATSAIRKSHFNHVVEPTDRWRLEREAFRVKVHEHVGRELARMATQGATSLAIVAEAEERGSVI 214
            ADRAHQQQISRRRYNNQSSLFARIR MPS LAPL EWQTTAAAADGE+T  RRDA+PAALSGF    XXXX TSAIRKSHF+HVVE TDRW LEREAFRVKVHEHVGRELARMA Q A SLA+VAEAEERGSVI
Sbjct:   22 ADRAHQQQISRRRYNNQSSLFARIRPMPSPLAPLLEWQTTAAAADGEKTNDRRDAAPAALSGFCXXXXXXXXTSAIRKSHFSHVVERTDRWCLEREAFRVKVHEHVGRELARMAAQAAASLAVVAEAEERGSVI 155
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig89.16890.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K6V4_9PHAE2.670e-8169.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSI9_ECTSI2.340e-6185.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 30..238
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..29
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 10..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig89contigE-siliculosus-1a_M_contig89:410426..415418 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig89.16890.1mRNA_E-siliculosus-1a_M_contig89.16890.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig89 409606..415479 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig89.16890.1 ID=prot_E-siliculosus-1a_M_contig89.16890.1|Name=mRNA_E-siliculosus-1a_M_contig89.16890.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=239bp
MSLSPYARPLPYGGWALSLTILLGGFFWVRAEGMSAPGSGSRDGQANSRQ
TQEGDEEEQREEEKSSAHCTPSSAYQTDQEADRAHQQQISRRRYNNQSSL
FARIRTMPSSLAPLSEWQTTAAAADGEETYVRRDASPAALSGFRAAAAAA
AATSAIRKSHFNHVVEPTDRWRLEREAFRVKVHEHVGRELARMATQGATS
LAIVAEAEERGSVISSGGSRRGRARRRPTAVASGTSCS*
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