prot_E-siliculosus-1a_M_contig89.16885.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig89.16885.1
Unique Nameprot_E-siliculosus-1a_M_contig89.16885.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length229
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig89.16885.1 vs. uniprot
Match: D8LSJ5_ECTSI (Erf4 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSJ5_ECTSI)

HSP 1 Score: 333 bits (853), Expect = 1.650e-113
Identity = 179/228 (78.51%), Postives = 179/228 (78.51%), Query Frame = 0 
Query:    1 MAAIQEHEAGGLGVIRLEPIGIKLGATAGISSAYDDQYPPELDGWMTTEEWFECIGRINRALMDRFPCGLCRLQAYCFCPCTLGLSLLSMRKEAKEIERGVGEVVKTVNQNLEARRRSVRFGFHRTFCSAWVQVEYGSKVGAPPPPLLPAAADDVARGSSLARSPTAVGGSGATGPSREREQPYSADEGGRGRKAAPTTVAATTSGAMQPLGEALLEPGNAAEEARGY 228
            MAAIQEHEAG LGVIRLEPIGIKLGAT GISSAYDDQYPPELDGWMTTEEWFECIGRINRALMDRFPCGLCRLQAYCFCPCTLGLSLLSMRKEAKEIERGVGEVVKTVNQNLEARRRSVRFGFHRTFCSAWVQVEYGSKVGAP                             ATGPSREREQPYSA                  SGAMQPLGEALLEPGNAAEEARGY
Sbjct:    1 MAAIQEHEAGVLGVIRLEPIGIKLGAT-GISSAYDDQYPPELDGWMTTEEWFECIGRINRALMDRFPCGLCRLQAYCFCPCTLGLSLLSMRKEAKEIERGVGEVVKTVNQNLEARRRSVRFGFHRTFCSAWVQVEYGSKVGAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATGPSREREQPYSAXXXXXXXXXXXXXXXXXXSGAMQPLGEALLEPGNAAEEARGY 227
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BLAST of mRNA_E-siliculosus-1a_M_contig89.16885.1 vs. uniprot
Match: A0A1V9Z5W3_9STRA (Erf4 domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z5W3_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 9.810e-10
Identity = 35/96 (36.46%), Postives = 51/96 (53.12%), Query Frame = 0 
Query:   15 IRLEPIGIKLGATAGISSAYDDQYPPELDGWMTTEEWFECIGRINRALMDRFPCGLCRLQAYCFCPCTLGLSLLSMRKEAKEIERGVGEVVKTVNQ 110
            +RL P+ ++     GIS AYDD++PPEL G +   ++   I +IN  L D +PC  C    Y  C CT GLSLL       + E+    ++  +NQ
Sbjct:    7 VRLMPMHMRF--VNGISRAYDDEFPPELQGRVDETQFTHAINQINNTLTDYWPCLFCVCYGYACCICTGGLSLLCPHMCISDAEQYARTLIDRINQ 100
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BLAST of mRNA_E-siliculosus-1a_M_contig89.16885.1 vs. uniprot
Match: A0A024U2C1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U2C1_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 2.350e-7
Identity = 33/109 (30.28%), Postives = 60/109 (55.05%), Query Frame = 0 
Query:   29 GISSAYDDQ-YPPELDGWMTTEEWFECIGRINRALMDRFPCGLCRLQAYCFCPCTLGLSLLSMRKEAKEIERGVGEVVKTVNQNLEARRRSVRFGFHRTFC--SAWVQV 134
            G+S+ YD   +PPE++ +M+ E++ + +  IN+AL D +PC  C   +Y  C CTLGLSL     +  E E+     +  VN+    R R + +   +++   ++W+ +
Sbjct:   32 GLSNEYDTSTFPPEIEVYMSKEDFDKALETINQALHDLWPCVPCWSTSYGCCICTLGLSLYCAWGQVSEAEKCAARQIARVNRRPCFRDRHITWQLEKSWLKHTSWLVI 140
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig89.16885.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LSJ5_ECTSI1.650e-11378.51Erf4 domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A1V9Z5W3_9STRA9.810e-1036.46Erf4 domain-containing protein n=1 Tax=Achlya hypo... [more]
A0A024U2C1_9STRA2.350e-730.28Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019383Golgin subfamily A member 7/ERF4PFAMPF10256Erf4coord: 33..119
e-value: 5.4E-7
score: 29.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig89contigE-siliculosus-1a_M_contig89:293347..300588 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig89.16885.1mRNA_E-siliculosus-1a_M_contig89.16885.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig89 292642..300631 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig89.16885.1 ID=prot_E-siliculosus-1a_M_contig89.16885.1|Name=mRNA_E-siliculosus-1a_M_contig89.16885.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=229bp
MAAIQEHEAGGLGVIRLEPIGIKLGATAGISSAYDDQYPPELDGWMTTEE
WFECIGRINRALMDRFPCGLCRLQAYCFCPCTLGLSLLSMRKEAKEIERG
VGEVVKTVNQNLEARRRSVRFGFHRTFCSAWVQVEYGSKVGAPPPPLLPA
AADDVARGSSLARSPTAVGGSGATGPSREREQPYSADEGGRGRKAAPTTV
AATTSGAMQPLGEALLEPGNAAEEARGY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019383Golgin_A_7/ERF4