prot_E-siliculosus-1a_M_contig89.16882.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig89.16882.1
Unique Nameprot_E-siliculosus-1a_M_contig89.16882.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length271
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig89.16882.1 vs. uniprot
Match: D8LSJ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSJ7_ECTSI)

HSP 1 Score: 454 bits (1169), Expect = 3.010e-160
Identity = 250/270 (92.59%), Postives = 254/270 (94.07%), Query Frame = 0 
Query:    1 MLLLEHYQREVLACIALAAALAALLLWWFRGTSEGRSSGGVGTSGSKKPLAHTPGIRAVCVQDSFTEGSNGGGWXXXXXXXXXXXGRAAASSKWEQSKQKGDLGYYFAHHITMKELAPEDYQMNGPKLLSKGDTASAPNGAKPNGSSXXXXXXXXXXXXXPQQISSYSWEDYGEEVRLTFRQSEWDWAKVDAEEIEIEWGSRRFRMSIDSREYGLHTIDLQRLSGDVVGVRARKLKTRLVVALVKGGRRGSYSHRPAWSKLQAALEKPSD 270
            MLLLEH+QREVLACIALAAALAALLLWWFRG SEGRSSGG GTSGSKKPLAHTPGIRAVC+QDSFTEGSNGGG XXXXXX      RAAASSKWEQSKQKGDLGYYFAHHITMKELAPEDYQMNGPKLLSKGDT SAPNGA+PNGS XXXXXXXXXXXXXPQQISSYSWEDYGEEVRLTFRQSEW+WAKVD EEIEIEWGSRRFRMSIDSREYGLHTIDLQRLSG V GV ARKLKTRLVVALVKGGRRGSYSH PAWSKLQAALEKPSD
Sbjct:    1 MLLLEHFQREVLACIALAAALAALLLWWFRGMSEGRSSGGAGTSGSKKPLAHTPGIRAVCMQDSFTEGSNGGGXXXXXXXTGQGDRRAAASSKWEQSKQKGDLGYYFAHHITMKELAPEDYQMNGPKLLSKGDTTSAPNGARPNGSXXXXXXXXXXXXXXPQQISSYSWEDYGEEVRLTFRQSEWEWAKVDVEEIEIEWGSRRFRMSIDSREYGLHTIDLQRLSGVVAGVTARKLKTRLVVALVKGGRRGSYSHSPAWSKLQAALEKPSD 270
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BLAST of mRNA_E-siliculosus-1a_M_contig89.16882.1 vs. uniprot
Match: A0A6H5L1W9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1W9_9PHAE)

HSP 1 Score: 227 bits (579), Expect = 2.110e-72
Identity = 113/131 (86.26%), Postives = 115/131 (87.79%), Query Frame = 0 
Query:    1 MLLLEHYQREVLACIALAAALAALLLWWFRGTSEGRSSGGVGTSGSKKPLAHTPGIRAVCVQDSFTEGSNGGGWXXXXXXXXXXXGRAAASSKWEQSKQKGDLGYYFAHHITMKELAPEDYQMNGPKLLSK 131
            MLLLEHYQREVLACIALAA LAALLLWW  G SEGRSSGGVGTSGSKKPLAHTPGIRAVCVQDSFT+GS+GGGW           G AAASSKWEQSKQKGDLGYYFAHHITMKELAPEDYQMNGPKLLSK
Sbjct:    1 MLLLEHYQREVLACIALAAGLAALLLWWSPGMSEGRSSGGVGTSGSKKPLAHTPGIRAVCVQDSFTQGSHGGGWGSSASSTGQGDGPAAASSKWEQSKQKGDLGYYFAHHITMKELAPEDYQMNGPKLLSK 131
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig89.16882.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LSJ7_ECTSI3.010e-16092.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L1W9_9PHAE2.110e-7286.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 161..267
e-value: 6.0E-5
score: 25.3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..270
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..29
NoneNo IPR availableTMHMMTMhelixcoord: 12..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig89contigE-siliculosus-1a_M_contig89:268084..271762 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig89.16882.1mRNA_E-siliculosus-1a_M_contig89.16882.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig89 267942..274418 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig89.16882.1 ID=prot_E-siliculosus-1a_M_contig89.16882.1|Name=mRNA_E-siliculosus-1a_M_contig89.16882.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=271bp
MLLLEHYQREVLACIALAAALAALLLWWFRGTSEGRSSGGVGTSGSKKPL
AHTPGIRAVCVQDSFTEGSNGGGWGSSSSSTGQGDGRAAASSKWEQSKQK
GDLGYYFAHHITMKELAPEDYQMNGPKLLSKGDTASAPNGAKPNGSSSAS
SPPVTTRRRRPQQISSYSWEDYGEEVRLTFRQSEWDWAKVDAEEIEIEWG
SRRFRMSIDSREYGLHTIDLQRLSGDVVGVRARKLKTRLVVALVKGGRRG
SYSHRPAWSKLQAALEKPSD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008978HSP20-like_chaperone