prot_E-siliculosus-1a_M_contig89.16869.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig89.16869.1
Unique Nameprot_E-siliculosus-1a_M_contig89.16869.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length112
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig89.16869.1 vs. uniprot
Match: D8LSL4_ECTSI (Ion channel nompc n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSL4_ECTSI)

HSP 1 Score: 186 bits (471), Expect = 7.600e-59
Identity = 98/112 (87.50%), Postives = 103/112 (91.96%), Query Frame = 0 
Query:    1 MEGDAESIGLLLEAAPSTVNRATKGGMTPLCVACEFGEAQAVSCLLSAGATSEGIACPLATATANGHESVVRVLLGTKERIEAFGGVDKLPSALCHAVQKHTSCAILHVLLS 112
            MEGD ESI LLLEAAPST+NRATKGGMTPLCVACEFG+AQ VS LLSA ATS+ + CPLATATANGHESVVRVLLGTKERI+AFGGVDKLPSALCHAVQKH SCAIL VLLS
Sbjct:    1 MEGDTESITLLLEAAPSTMNRATKGGMTPLCVACEFGQAQVVSRLLSAEATSKWMPCPLATATANGHESVVRVLLGTKERIKAFGGVDKLPSALCHAVQKHNSCAILLVLLS 112
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BLAST of mRNA_E-siliculosus-1a_M_contig89.16869.1 vs. uniprot
Match: D8LSK8_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSK8_ECTSI)

HSP 1 Score: 70.9 bits (172), Expect = 5.530e-12
Identity = 50/111 (45.05%), Postives = 66/111 (59.46%), Query Frame = 0 
Query:    8 IGLLLEAAPSTVNRATKGGMTPLCVACEFGEAQAVSCLLSAGA-----TSEGIACPLATATANGHESVVRVLLGTKERIEAFGGVDKLPSALCHAVQKHTSCA-ILHVLLS 112
            I +LL+ AP+T+NRAT  G+TPL  A   G+ +AVS LLSAGA     ++E   CPL  A    H+ VVRVLL T   ++A GG D +P A+  A       A I+ +LLS
Sbjct:  278 IDILLQKAPTTLNRATPDGLTPLYAAAMSGKGKAVSHLLSAGARQPPASAEKDMCPLVAAVRENHQEVVRVLL-TDRGMKAIGGADVIPRAVGAAASARKGRASIVRMLLS 387
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BLAST of mRNA_E-siliculosus-1a_M_contig89.16869.1 vs. uniprot
Match: A0A6H5JSC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSC7_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 2.620e-11
Identity = 50/111 (45.05%), Postives = 65/111 (58.56%), Query Frame = 0 
Query:    8 IGLLLEAAPSTVNRATKGGMTPLCVACEFGEAQAVSCLLSAGA-----TSEGIACPLATATANGHESVVRVLLGTKERIEAFGGVDKLPSALCHAVQKHTSCA-ILHVLLS 112
            I +LL+ AP+T+NRAT  G+TPL  A   G+ +AVS LLSAGA     ++E   CPL  A    H+ VVRVLL T   +EA  G D +P A+  A       A I+ +LLS
Sbjct:  286 IDILLQKAPTTLNRATPDGLTPLYAAAMSGKGKAVSHLLSAGARQPPASAEKDMCPLVAAVRENHQEVVRVLL-TDRGMEAIDGPDVIPRAVGAAASARKGRASIVRMLLS 395
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BLAST of mRNA_E-siliculosus-1a_M_contig89.16869.1 vs. uniprot
Match: D7FVH7_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVH7_ECTSI)

HSP 1 Score: 57.4 bits (137), Expect = 1.920e-7
Identity = 41/106 (38.68%), Postives = 55/106 (51.89%), Query Frame = 0 
Query:    3 GDAESIGLLLEAAPSTVNRATKGGMTPLCVACEFGEAQAVSCLLSAGATSEGIA-----CPLATATANGHESVVRVLLGTKERIEAFGGVDKLPSALCHAVQKHTS 103
            G   +I  +L  AP+TVN+    G TPL +A  FG+ +AVS LLSAGA    ++     CPL  A       VVRVLL   + + A GG   LP A  +  ++  S
Sbjct:  114 GRIRTIQTILSVAPTTVNQVAPDGSTPLYMASGFGQYEAVSLLLSAGAKQTRLSFEKGKCPLDVAVRQNRTDVVRVLLS--DGLHAIGGSLVLPQATSYLRRREES 217
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig89.16869.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LSL4_ECTSI7.600e-5987.50Ion channel nompc n=1 Tax=Ectocarpus siliculosus T... [more]
D8LSK8_ECTSI5.530e-1245.05Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JSC7_9PHAE2.620e-1145.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVH7_ECTSI1.920e-738.68Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 3..76
e-value: 2.9E-7
score: 31.0
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..50
score: 9.118
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..112
e-value: 6.8E-14
score: 53.6
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 2..93
NoneNo IPR availablePANTHERPTHR24133FAMILY NOT NAMEDcoord: 2..98
NoneNo IPR availablePANTHERPTHR24133:SF40coord: 2..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig89contigE-siliculosus-1a_M_contig89:142747..143082 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig89.16869.1mRNA_E-siliculosus-1a_M_contig89.16869.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig89 142747..143082 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig89.16869.1 ID=prot_E-siliculosus-1a_M_contig89.16869.1|Name=mRNA_E-siliculosus-1a_M_contig89.16869.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=112bp
MEGDAESIGLLLEAAPSTVNRATKGGMTPLCVACEFGEAQAVSCLLSAGA
TSEGIACPLATATANGHESVVRVLLGTKERIEAFGGVDKLPSALCHAVQK
HTSCAILHVLLS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom